RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 RNF20Q5VTR2 975 aa16.06■□□□□ 0.16
PNKP-228ENST00000637325 NFXL1Q6ZNB6 911 aa16.06■□□□□ 0.16
PNKP-228ENST00000637325 DNERQ8NFT8 737 aa16.06■□□□□ 0.16
PNKP-228ENST00000637325 GDF15Q99988 308 aa16.06■□□□□ 0.16
PNKP-228ENST00000637325 LBHD1Q9BQE6 289 aaPredicted RBP16.06■□□□□ 0.16
PNKP-228ENST00000637325 AMNQ9BXJ7 453 aa16.06■□□□□ 0.16
PNKP-228ENST00000637325 UPF3AQ9H1J1 476 aaKnown RBP16.06■□□□□ 0.16
PNKP-228ENST00000637325 SENP2Q9HC62 589 aa16.06■□□□□ 0.16
PNKP-228ENST00000637325 PRDM5Q9NQX1 630 aaPredicted RBP16.06■□□□□ 0.16
PNKP-228ENST00000637325 PDGFCQ9NRA1 345 aa16.06■□□□□ 0.16
PNKP-228ENST00000637325 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.05■□□□□ 0.16
PNKP-228ENST00000637325 MYADML2A6NDP7 307 aa16.05■□□□□ 0.16
PNKP-228ENST00000637325 DYNC1LI2O43237 492 aaPredicted RBP16.05■□□□□ 0.16
PNKP-228ENST00000637325 ADCY6O43306 1168 aa16.05■□□□□ 0.16
PNKP-228ENST00000637325 PRC1O43663 620 aa16.05■□□□□ 0.16
PNKP-228ENST00000637325 CST5P28325 142 aaPredicted RBP16.05■□□□□ 0.16
PNKP-228ENST00000637325 BMP8BP34820 402 aa16.05■□□□□ 0.16
PNKP-228ENST00000637325 ANTXR2P58335 489 aa16.05■□□□□ 0.16
PNKP-228ENST00000637325 MDM2Q00987 491 aaPredicted RBP16.05■□□□□ 0.16
PNKP-228ENST00000637325 SNX17Q15036 470 aa16.05■□□□□ 0.16
PNKP-228ENST00000637325 NECTIN1Q15223 517 aa16.05■□□□□ 0.16
PNKP-228ENST00000637325 IGDCC4Q8TDY8 1250 aa16.05■□□□□ 0.16
PNKP-228ENST00000637325 MORC4Q8TE76 937 aa16.05■□□□□ 0.16
PNKP-228ENST00000637325 GLT1D1Q96MS3 346 aa16.05■□□□□ 0.16
PNKP-228ENST00000637325 UBE2OQ9C0C9 1292 aaKnown RBP16.05■□□□□ 0.16
PNKP-228ENST00000637325 MAF1Q9H063 256 aa16.05■□□□□ 0.16
PNKP-228ENST00000637325 PRO3102Q9H379 93 aa16.05■□□□□ 0.16
PNKP-228ENST00000637325 A0A1W2PPC1 479 aa16.04■□□□□ 0.16
PNKP-228ENST00000637325 ZBTB5O15062 677 aa16.04■□□□□ 0.16
PNKP-228ENST00000637325 ZEB2O60315 1214 aa16.04■□□□□ 0.16
PNKP-228ENST00000637325 ASGR1P07306 291 aa16.04■□□□□ 0.16
PNKP-228ENST00000637325 SMPD1P17405 629 aa16.04■□□□□ 0.16
PNKP-228ENST00000637325 FXR1P51114 621 aaKnown RBP eCLIP16.04■□□□□ 0.16
PNKP-228ENST00000637325 TLE2Q04725 743 aa16.04■□□□□ 0.16
PNKP-228ENST00000637325 TRAF1Q13077 416 aa16.04■□□□□ 0.16
PNKP-228ENST00000637325 C1orf53Q5VUE5 145 aa16.04■□□□□ 0.16
PNKP-228ENST00000637325 TAPT1Q6NXT6 567 aa16.04■□□□□ 0.16
PNKP-228ENST00000637325 TLK2Q86UE8 772 aa16.04■□□□□ 0.16
PNKP-228ENST00000637325 HOMER1Q86YM7 354 aa16.04■□□□□ 0.16
PNKP-228ENST00000637325 TMTC2Q8N394 836 aa16.04■□□□□ 0.16
PNKP-228ENST00000637325 CTCFLQ8NI51 663 aaPredicted RBP16.04■□□□□ 0.16
PNKP-228ENST00000637325 TBC1D5Q92609 795 aa16.04■□□□□ 0.16
PNKP-228ENST00000637325 TMEM87BQ96K49 555 aa16.04■□□□□ 0.16
PNKP-228ENST00000637325 MTA3Q9BTC8 594 aa16.04■□□□□ 0.16
PNKP-228ENST00000637325 GNEQ9Y223 722 aaKnown RBP16.04■□□□□ 0.16
PNKP-228ENST00000637325 LTBP2Q14767 1821 aa16.03■□□□□ 0.16
PNKP-228ENST00000637325 RANBP2P49792 3224 aaKnown RBP16.03■□□□□ 0.16
PNKP-228ENST00000637325 CCDC69A6NI79 296 aa16.03■□□□□ 0.16
PNKP-228ENST00000637325 PQBP1O60828 265 aaKnown RBP16.03■□□□□ 0.16
PNKP-228ENST00000637325 IRX5P78411 483 aaPredicted RBP16.03■□□□□ 0.16
PNKP-228ENST00000637325 BEX3Q00994 111 aa16.03■□□□□ 0.16
PNKP-228ENST00000637325 TROAPQ12815 778 aa16.03■□□□□ 0.16
PNKP-228ENST00000637325 CCSAPQ6IQ19 270 aaPredicted RBP16.03■□□□□ 0.16
PNKP-228ENST00000637325 ZNF654Q8IZM8 581 aa16.03■□□□□ 0.16
PNKP-228ENST00000637325 WDR11Q9BZH6 1224 aa16.03■□□□□ 0.16
PNKP-228ENST00000637325 LY9Q9HBG7 655 aa16.03■□□□□ 0.16
PNKP-228ENST00000637325 Q9Y3F1 56 aa16.03■□□□□ 0.16
PNKP-228ENST00000637325 PCDHA1Q9Y5I3 950 aa16.03■□□□□ 0.16
PNKP-228ENST00000637325 ELP1O95163 1332 aa16.02■□□□□ 0.16
PNKP-228ENST00000637325 DDAH1O94760 285 aa16.02■□□□□ 0.16
PNKP-228ENST00000637325 CFBP00751 764 aa16.02■□□□□ 0.16
PNKP-228ENST00000637325 KIF5BP33176 963 aa16.02■□□□□ 0.16
PNKP-228ENST00000637325 FSCN1Q16658 493 aaKnown RBP16.02■□□□□ 0.16
PNKP-228ENST00000637325 SYTL5Q8TDW5 730 aaPredicted RBP16.02■□□□□ 0.16
PNKP-228ENST00000637325 NSUN6Q8TEA1 469 aaKnown RBP16.02■□□□□ 0.16
PNKP-228ENST00000637325 MTMR8Q96EF0 704 aa16.02■□□□□ 0.16
PNKP-228ENST00000637325 PIGSQ96S52 555 aa16.02■□□□□ 0.16
PNKP-228ENST00000637325 RIOX1Q9H6W3 641 aa16.02■□□□□ 0.16
PNKP-228ENST00000637325 GPHNQ9NQX3 736 aaPredicted RBP16.02■□□□□ 0.16
PNKP-228ENST00000637325 PCDH10Q9P2E7 1040 aa16.02■□□□□ 0.16
PNKP-228ENST00000637325 DCDC2CA8MYV0 355 aa16.01■□□□□ 0.15
PNKP-228ENST00000637325 SH2B2O14492 632 aaPredicted RBP16.01■□□□□ 0.15
PNKP-228ENST00000637325 CLTBP09497 229 aa16.01■□□□□ 0.15
PNKP-228ENST00000637325 GNAQP50148 359 aa16.01■□□□□ 0.15
PNKP-228ENST00000637325 NKX3-2P78367 333 aa16.01■□□□□ 0.15
PNKP-228ENST00000637325 DUSP28Q4G0W2 176 aa16.01■□□□□ 0.15
PNKP-228ENST00000637325 ARHGEF16Q5VV41 709 aa16.01■□□□□ 0.15
PNKP-228ENST00000637325 PIBF1Q8WXW3 757 aa16.01■□□□□ 0.15
PNKP-228ENST00000637325 NEK1Q96PY6 1258 aa16.01■□□□□ 0.15
PNKP-228ENST00000637325 TAAR1Q96RJ0 339 aa16.01■□□□□ 0.15
PNKP-228ENST00000637325 RMDN3Q96TC7 470 aa16.01■□□□□ 0.15
PNKP-228ENST00000637325 MAP3K14Q99558 947 aa16.01■□□□□ 0.15
PNKP-228ENST00000637325 MYL10Q9BUA6 226 aa16.01■□□□□ 0.15
PNKP-228ENST00000637325 PDLIM7Q9NR12 457 aa16.01■□□□□ 0.15
PNKP-228ENST00000637325 MROH7Q68CQ1 1323 aa16■□□□□ 0.15
PNKP-228ENST00000637325 PNMA6FA0A0J9YX94 578 aa16■□□□□ 0.15
PNKP-228ENST00000637325 A0A0U1RQG5 324 aaPredicted RBP16■□□□□ 0.15
PNKP-228ENST00000637325 RBM47A0AV96 593 aaKnown RBP16■□□□□ 0.15
PNKP-228ENST00000637325 CTAGE5O15320 804 aa16■□□□□ 0.15
PNKP-228ENST00000637325 PPP1R11O60927 126 aaPredicted RBP16■□□□□ 0.15
PNKP-228ENST00000637325 CABYRO75952 493 aa16■□□□□ 0.15
PNKP-228ENST00000637325 CALM1P0DP23 149 aa16■□□□□ 0.15
PNKP-228ENST00000637325 CALM2P0DP24 149 aa16■□□□□ 0.15
PNKP-228ENST00000637325 CALM3P0DP25 149 aa16■□□□□ 0.15
PNKP-228ENST00000637325 PTGS1P23219 599 aa16■□□□□ 0.15
PNKP-228ENST00000637325 EDNRBP24530 442 aa16■□□□□ 0.15
PNKP-228ENST00000637325 LIFRP42702 1097 aa16■□□□□ 0.15
PNKP-228ENST00000637325 PPP2R5BQ15173 497 aa16■□□□□ 0.15
PNKP-228ENST00000637325 BRDTQ58F21 947 aaPredicted RBP16■□□□□ 0.15
PNKP-228ENST00000637325 CXCL17Q6UXB2 119 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms