RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 RIPK3Q9Y572 518 aa15.29■□□□□ 0.04
LINC00643-207ENST00000637212 MORC2Q9Y6X9 1032 aaPredicted RBP15.29■□□□□ 0.04
LINC00643-207ENST00000637212 TRPM7Q96QT4 1865 aa15.29■□□□□ 0.04
LINC00643-207ENST00000637212 SPDYE3A6NKU9 549 aa15.28■□□□□ 0.04
LINC00643-207ENST00000637212 GOLGA6L22H0YM25 854 aa15.28■□□□□ 0.04
LINC00643-207ENST00000637212 IGF2BP3O00425 579 aaKnown RBP eCLIP15.28■□□□□ 0.04
LINC00643-207ENST00000637212 YEATS4O95619 227 aa15.28■□□□□ 0.04
LINC00643-207ENST00000637212 BMP15O95972 392 aa15.28■□□□□ 0.04
LINC00643-207ENST00000637212 ALDH1A1P00352 501 aa15.28■□□□□ 0.04
LINC00643-207ENST00000637212 CFBP00751 764 aa15.28■□□□□ 0.04
LINC00643-207ENST00000637212 NASPP49321 788 aaPredicted RBP15.28■□□□□ 0.04
LINC00643-207ENST00000637212 CCNA1P78396 465 aa15.28■□□□□ 0.04
LINC00643-207ENST00000637212 ORC2Q13416 577 aaPredicted RBP15.28■□□□□ 0.04
LINC00643-207ENST00000637212 UBE2SQ16763 222 aa15.28■□□□□ 0.04
LINC00643-207ENST00000637212 Q3C1V9 767 aa15.28■□□□□ 0.04
LINC00643-207ENST00000637212 FOXD4L6Q3SYB3 417 aaPredicted RBP15.28■□□□□ 0.04
LINC00643-207ENST00000637212 MUM1L1Q5H9M0 696 aa15.28■□□□□ 0.04
LINC00643-207ENST00000637212 EARS2Q5JPH6 523 aaKnown RBP15.28■□□□□ 0.04
LINC00643-207ENST00000637212 ANO1Q5XXA6 986 aa15.28■□□□□ 0.04
LINC00643-207ENST00000637212 CYP4F22Q6NT55 531 aa15.28■□□□□ 0.04
LINC00643-207ENST00000637212 FOXD4L3Q6VB84 417 aaPredicted RBP15.28■□□□□ 0.04
LINC00643-207ENST00000637212 RASGRP4Q8TDF6 673 aa15.28■□□□□ 0.04
LINC00643-207ENST00000637212 TBC1D5Q92609 795 aa15.28■□□□□ 0.04
LINC00643-207ENST00000637212 CAPNS2Q96L46 248 aa15.28■□□□□ 0.04
LINC00643-207ENST00000637212 MOV10L1Q9BXT6 1211 aaKnown RBP15.28■□□□□ 0.04
LINC00643-207ENST00000637212 MROH8Q9H579 483 aa15.28■□□□□ 0.04
LINC00643-207ENST00000637212 ACAD9Q9H845 621 aa15.28■□□□□ 0.04
LINC00643-207ENST00000637212 EHMT1Q9H9B1 1298 aa15.28■□□□□ 0.04
LINC00643-207ENST00000637212 TXNRD2Q9NNW7 524 aa15.28■□□□□ 0.04
LINC00643-207ENST00000637212 TMEM260Q9NX78 707 aa15.28■□□□□ 0.04
LINC00643-207ENST00000637212 CEP131Q9UPN4 1083 aa15.28■□□□□ 0.04
LINC00643-207ENST00000637212 NFIBO00712 420 aa15.27■□□□□ 0.04
LINC00643-207ENST00000637212 PTMSP20962 102 aa15.27■□□□□ 0.04
LINC00643-207ENST00000637212 MCM4P33991 863 aa15.27■□□□□ 0.04
LINC00643-207ENST00000637212 ERVK-9P63128 1117 aa15.27■□□□□ 0.04
LINC00643-207ENST00000637212 ERVK-24P63145 666 aa15.27■□□□□ 0.04
LINC00643-207ENST00000637212 RNF207Q6ZRF8 634 aa15.27■□□□□ 0.04
LINC00643-207ENST00000637212 PAXIP1Q6ZW49 1069 aaPredicted RBP15.27■□□□□ 0.04
LINC00643-207ENST00000637212 NEK8Q86SG6 692 aa15.27■□□□□ 0.04
LINC00643-207ENST00000637212 TBCKQ8TEA7 893 aa15.27■□□□□ 0.04
LINC00643-207ENST00000637212 USP28Q96RU2 1077 aa15.27■□□□□ 0.04
LINC00643-207ENST00000637212 PAGR1Q9BTK6 254 aa15.27■□□□□ 0.04
LINC00643-207ENST00000637212 ZFYVE28Q9HCC9 887 aa15.27■□□□□ 0.04
LINC00643-207ENST00000637212 LOC285556D6RIA3 1793 aa15.26■□□□□ 0.03
LINC00643-207ENST00000637212 CYP3A4P08684 503 aa15.26■□□□□ 0.03
LINC00643-207ENST00000637212 TAL1P17542 331 aaPredicted RBP15.26■□□□□ 0.03
LINC00643-207ENST00000637212 NCLP19338 710 aaKnown RBP15.26■□□□□ 0.03
LINC00643-207ENST00000637212 HOXA13P31271 388 aaPredicted RBP15.26■□□□□ 0.03
LINC00643-207ENST00000637212 MAP2K2P36507 400 aa15.26■□□□□ 0.03
LINC00643-207ENST00000637212 SLC39A14Q15043 492 aa15.26■□□□□ 0.03
LINC00643-207ENST00000637212 INF2Q27J81 1249 aa15.26■□□□□ 0.03
LINC00643-207ENST00000637212 NOM1Q5C9Z4 860 aaKnown RBP15.26■□□□□ 0.03
LINC00643-207ENST00000637212 TTC38Q5R3I4 469 aa15.26■□□□□ 0.03
LINC00643-207ENST00000637212 JMYQ8N9B5 988 aa15.26■□□□□ 0.03
LINC00643-207ENST00000637212 TMEM87AQ8NBN3 555 aa15.26■□□□□ 0.03
LINC00643-207ENST00000637212 LINC00301Q8NCQ3 95 aa15.26■□□□□ 0.03
LINC00643-207ENST00000637212 SYTL5Q8TDW5 730 aaPredicted RBP15.26■□□□□ 0.03
LINC00643-207ENST00000637212 SPATA32Q96LK8 384 aa15.26■□□□□ 0.03
LINC00643-207ENST00000637212 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.26■□□□□ 0.03
LINC00643-207ENST00000637212 HOMER2Q9NSB8 354 aa15.26■□□□□ 0.03
LINC00643-207ENST00000637212 CNPY2Q9Y2B0 182 aa15.26■□□□□ 0.03
LINC00643-207ENST00000637212 BAZ2BQ9UIF8 2168 aaKnown RBP15.26■□□□□ 0.03
LINC00643-207ENST00000637212 PFASO15067 1338 aa15.25■□□□□ 0.03
LINC00643-207ENST00000637212 ELP1O95163 1332 aa15.25■□□□□ 0.03
LINC00643-207ENST00000637212 CYP3A7-CYP3A51PA0A087WV96 503 aa15.25■□□□□ 0.03
LINC00643-207ENST00000637212 FAM205CA6NFA0 338 aa15.25■□□□□ 0.03
LINC00643-207ENST00000637212 CA12O43570 354 aa15.25■□□□□ 0.03
LINC00643-207ENST00000637212 GCFC2P16383 781 aaKnown RBP15.25■□□□□ 0.03
LINC00643-207ENST00000637212 ERCC3P19447 782 aa15.25■□□□□ 0.03
LINC00643-207ENST00000637212 CYP3A7P24462 503 aa15.25■□□□□ 0.03
LINC00643-207ENST00000637212 SREBF1P36956 1147 aa15.25■□□□□ 0.03
LINC00643-207ENST00000637212 RPS6P62753 249 aaKnown RBP15.25■□□□□ 0.03
LINC00643-207ENST00000637212 BAATQ14032 418 aaPredicted RBP15.25■□□□□ 0.03
LINC00643-207ENST00000637212 SF3A1Q15459 793 aaKnown RBP15.25■□□□□ 0.03
LINC00643-207ENST00000637212 TAF1CQ15572 869 aaPredicted RBP15.25■□□□□ 0.03
LINC00643-207ENST00000637212 FAM110CQ1W6H9 321 aa15.25■□□□□ 0.03
LINC00643-207ENST00000637212 PPP4R3AQ6IN85 833 aa15.25■□□□□ 0.03
LINC00643-207ENST00000637212 MOXD1Q6UVY6 613 aa15.25■□□□□ 0.03
LINC00643-207ENST00000637212 FCHSD1Q86WN1 690 aa15.25■□□□□ 0.03
LINC00643-207ENST00000637212 NCAPG2Q86XI2 1143 aa15.25■□□□□ 0.03
LINC00643-207ENST00000637212 KCNG4Q8TDN1 519 aa15.25■□□□□ 0.03
LINC00643-207ENST00000637212 LEO1Q8WVC0 666 aaPredicted RBP15.25■□□□□ 0.03
LINC00643-207ENST00000637212 CRYGNQ8WXF5 182 aa15.25■□□□□ 0.03
LINC00643-207ENST00000637212 ANO3Q9BYT9 981 aa15.25■□□□□ 0.03
LINC00643-207ENST00000637212 CYP39A1Q9NYL5 469 aa15.25■□□□□ 0.03
LINC00643-207ENST00000637212 CLIC4Q9Y696 253 aa15.25■□□□□ 0.03
LINC00643-207ENST00000637212 DDX11L8A8MPP1 907 aa15.24■□□□□ 0.03
LINC00643-207ENST00000637212 STRNO43815 780 aa15.24■□□□□ 0.03
LINC00643-207ENST00000637212 TLR2O60603 784 aa15.24■□□□□ 0.03
LINC00643-207ENST00000637212 PPP6R2O75170 966 aa15.24■□□□□ 0.03
LINC00643-207ENST00000637212 CIITAP33076 1130 aa15.24■□□□□ 0.03
LINC00643-207ENST00000637212 STK38Q15208 465 aa15.24■□□□□ 0.03
LINC00643-207ENST00000637212 PTPAQ15257 358 aa15.24■□□□□ 0.03
LINC00643-207ENST00000637212 ZNF174Q15697 407 aa15.24■□□□□ 0.03
LINC00643-207ENST00000637212 XRRA1Q6P2D8 792 aa15.24■□□□□ 0.03
LINC00643-207ENST00000637212 NSMFQ6X4W1 530 aa15.24■□□□□ 0.03
LINC00643-207ENST00000637212 ANKRD13CQ8N6S4 541 aa15.24■□□□□ 0.03
LINC00643-207ENST00000637212 CHAMP1Q96JM3 812 aa15.24■□□□□ 0.03
LINC00643-207ENST00000637212 A1CFQ9NQ94 594 aaKnown RBP15.24■□□□□ 0.03
LINC00643-207ENST00000637212 PCDHB6Q9Y5E3 794 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms