RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-225ENST00000636861 RC3H1Q5TC82 1133 aaKnown RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 ALS2CLQ60I27 953 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 LARP1BQ659C4 914 aaKnown RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 MIS18BP1Q6P0N0 1132 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 FOXR1Q6PIV2 292 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 TRIM65Q6PJ69 517 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 FOXD4L3Q6VB84 417 aaPredicted RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 GIGYF2Q6Y7W6 1299 aaKnown RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 DDX46Q7L014 1031 aaKnown RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 UBE3BQ7Z3V4 1068 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 APBB1IPQ7Z5R6 666 aaPredicted RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 TTC6Q86TZ1 520 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 MYLK4Q86YV6 388 aaPredicted RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 TMTC2Q8N394 836 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 GALNT15Q8N3T1 639 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 AOPEPQ8N6M6 819 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 LSM14AQ8ND56 463 aaKnown RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 C1orf131Q8NDD1 294 aaKnown RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 CFAP61Q8NHU2 1237 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 CAGE1Q8TC20 777 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 ZC3H15Q8WU90 426 aaKnown RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 HDAC7Q8WUI4 952 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 PIK3R5Q8WYR1 880 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 ZBTB10Q96DT7 871 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 CCDC51Q96ER9 411 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 TTC14Q96N46 770 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 TRAPPC9Q96Q05 1148 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 HNRNPABQ99729 332 aaKnown RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 NAPGQ99747 312 aaPredicted RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 GORASP1Q9BQQ3 440 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 TCHPQ9BT92 498 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 NRDE2Q9H7Z3 1164 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 EBF2Q9HAK2 575 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 CD248Q9HCU0 757 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 ABCB6Q9NP58 842 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 ZNHIT6Q9NWK9 470 aaKnown RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 ABCF2Q9UG63 623 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 DDX20Q9UHI6 824 aaKnown RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 TMCO1Q9UM00 188 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 HPCAL4Q9UM19 191 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 C15orf41Q9Y2V0 281 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 CYP46A1Q9Y6A2 500 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 TCHHQ07283 1943 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 IGF2RP11717 2491 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 FREM2Q5SZK8 3169 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 DDX60LQ5H9U9 1706 aaKnown RBP4.47□□□□□ -1.69
CHD2-225ENST00000636861 MYH15Q9Y2K3 1946 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 VWA3AA6NCI4 1184 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 E7ENQ6 273 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 MYO1FO00160 1098 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 STXBP3O00186 592 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 HIP1O00291 1037 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 IGF2BP3O00425 579 aaKnown RBP eCLIP4.47□□□□□ -1.69
CHD2-225ENST00000636861 SMIM24O75264 130 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 TMCC1O94876 653 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 NPTXRO95502 500 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 SERPINC1P01008 464 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 PENKP01210 267 aaPredicted RBP4.47□□□□□ -1.69
CHD2-225ENST00000636861 GJB1P08034 283 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 GSTA2P09210 222 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 U2AF1L5P0DN76 240 aaPredicted RBP4.47□□□□□ -1.69
CHD2-225ENST00000636861 ALDH3A1P30838 453 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 GMPSP49915 693 aaPredicted RBP4.47□□□□□ -1.69
CHD2-225ENST00000636861 MDM2Q00987 491 aaPredicted RBP4.47□□□□□ -1.69
CHD2-225ENST00000636861 U2AF1Q01081 240 aaKnown RBP eCLIP4.47□□□□□ -1.69
CHD2-225ENST00000636861 TCF15Q12870 199 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 XRCC4Q13426 336 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 PRPF4BQ13523 1007 aaKnown RBP4.47□□□□□ -1.69
CHD2-225ENST00000636861 TRIM14Q14142 442 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 LBRQ14739 615 aaKnown RBP4.47□□□□□ -1.69
CHD2-225ENST00000636861 CMPK2Q5EBM0 449 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 CFAP70Q5T0N1 1121 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 ARMCX5Q6P1M9 558 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 EMBQ6PCB8 327 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 KDM7AQ6ZMT4 941 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 SYNE3Q6ZMZ3 975 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 ZNF365Q70YC5 407 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 NOL8Q76FK4 1167 aaKnown RBP4.47□□□□□ -1.69
CHD2-225ENST00000636861 ASCL5Q7RTU5 278 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 KRT26Q7Z3Y9 468 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 DHX40Q8IX18 779 aaKnown RBP4.47□□□□□ -1.69
CHD2-225ENST00000636861 EXOC8Q8IYI6 725 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 CCDC155Q8N6L0 562 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 ANKS4BQ8N8V4 417 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 CUL5Q93034 780 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 GFM2Q969S9 779 aaKnown RBP4.47□□□□□ -1.69
CHD2-225ENST00000636861 TEKT1Q969V4 418 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 KIFC2Q96AC6 838 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 DHX58Q96C10 678 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 IQCDQ96DY2 449 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 RBM41Q96IZ5 413 aaKnown RBP4.47□□□□□ -1.69
CHD2-225ENST00000636861 MAML3Q96JK9 1138 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 CCDC28BQ9BUN5 200 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 XPO4Q9C0E2 1151 aaKnown RBP4.47□□□□□ -1.69
CHD2-225ENST00000636861 ARHGAP39Q9C0H5 1083 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 EPN3Q9H201 632 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 MMADHCQ9H3L0 296 aaPredicted RBP4.47□□□□□ -1.69
CHD2-225ENST00000636861 UNC45AQ9H3U1 944 aa4.47□□□□□ -1.69
CHD2-225ENST00000636861 KAT14Q9H8E8 782 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms