RNA–Protein interactions for RNA: ENST00000636666.1

EPB41-213, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 5

Gene EPB41, Length 3,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-213ENST00000636666 TRAPPC11Q7Z392 1133 aa7.42□□□□□ -1.22
EPB41-213ENST00000636666 SNX29Q8TEQ0 813 aa7.42□□□□□ -1.22
EPB41-213ENST00000636666 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.42□□□□□ -1.22
EPB41-213ENST00000636666 ISCA1Q9BUE6 129 aa7.42□□□□□ -1.22
EPB41-213ENST00000636666 TMEM60Q9H2L4 133 aa7.42□□□□□ -1.22
EPB41-213ENST00000636666 CD248Q9HCU0 757 aa7.42□□□□□ -1.22
EPB41-213ENST00000636666 RBM12Q9NTZ6 932 aaKnown RBP7.42□□□□□ -1.22
EPB41-213ENST00000636666 LIMA1Q9UHB6 759 aaKnown RBP7.42□□□□□ -1.22
EPB41-213ENST00000636666 CDHR2Q9BYE9 1310 aa7.42□□□□□ -1.22
EPB41-213ENST00000636666 PRPF3O43395 683 aaKnown RBP7.41□□□□□ -1.22
EPB41-213ENST00000636666 VIMP08670 466 aaKnown RBP7.41□□□□□ -1.22
EPB41-213ENST00000636666 ABCB4P21439 1286 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 HNRNPH1P31943 449 aaKnown RBP7.41□□□□□ -1.22
EPB41-213ENST00000636666 TXNRD1Q16881 649 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 MSL1Q68DK7 614 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 DDX42Q86XP3 938 aaKnown RBP eCLIP7.41□□□□□ -1.22
EPB41-213ENST00000636666 MAPKAPK5Q8IW41 473 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 SLC44A5Q8NCS7 719 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 MGARPQ8TDB4 240 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 STAG1Q8WVM7 1258 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 PIGBQ92521 554 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 LSM14BQ9BX40 385 aaKnown RBP7.41□□□□□ -1.22
EPB41-213ENST00000636666 STK36Q9NRP7 1315 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 SMCO2A6NFE2 343 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 FGFR1OPO95684 399 aaKnown RBP7.41□□□□□ -1.22
EPB41-213ENST00000636666 CLTAP09496 248 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 SLC1A4P43007 532 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 TNNC1P63316 161 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 MAP2K1Q02750 393 aaPredicted RBP7.41□□□□□ -1.22
EPB41-213ENST00000636666 ADCY1Q08828 1119 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 PICALMQ13492 652 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 HERC4Q5GLZ8 1057 aaPredicted RBP7.41□□□□□ -1.22
EPB41-213ENST00000636666 KRT79Q5XKE5 535 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 DAAM2Q86T65 1068 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 FAM133AQ8N9E0 248 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 GJA10Q969M2 543 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 ZIM3Q96PE6 472 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 NDST4Q9H3R1 872 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 GPCPD1Q9NPB8 672 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 SNX12Q9UMY4 172 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 REXO2Q9Y3B8 237 aaKnown RBP7.41□□□□□ -1.22
EPB41-213ENST00000636666 AGLP35573 1532 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 MROH5Q6ZUA9 1318 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 C3P01024 1663 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 PALMO75781 387 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 GUCY2CP25092 1073 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 TMOD1P28289 359 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 LONP1P36776 959 aaKnown RBP7.41□□□□□ -1.22
EPB41-213ENST00000636666 ATP2C1P98194 919 aaPredicted RBP7.41□□□□□ -1.22
EPB41-213ENST00000636666 MKRN4PQ13434 485 aaPredicted RBP7.41□□□□□ -1.22
EPB41-213ENST00000636666 PPP1R7Q15435 360 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 CNNM4Q6P4Q7 775 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 TMTC3Q6ZXV5 915 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 TCP11Q8WWU5 503 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 PHF20Q9BVI0 1012 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 CAPN11Q9UMQ6 739 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 PLEKHG2Q9H7P9 1386 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 JCADQ9P266 1359 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 SPATA31D1Q6ZQQ2 1576 aa7.41□□□□□ -1.22
EPB41-213ENST00000636666 KDM6AO15550 1401 aaPredicted RBP7.4□□□□□ -1.22
EPB41-213ENST00000636666 G3V3G9 751 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 EIF3HO15372 352 aaKnown RBP eCLIP7.4□□□□□ -1.22
EPB41-213ENST00000636666 ADAMTS2O95450 1211 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 EZRP15311 586 aaKnown RBP7.4□□□□□ -1.22
EPB41-213ENST00000636666 PRDX5P30044 214 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 CLNS1AP54105 237 aaKnown RBP7.4□□□□□ -1.22
EPB41-213ENST00000636666 RPS6KA1Q15418 735 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 DCAF8Q5TAQ9 597 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 SFMBT2Q5VUG0 894 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 SUSD4Q5VX71 490 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 WDR93Q6P2C0 686 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 ADGRA1Q86SQ6 560 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 ADSSL1Q8N142 457 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 TSEN2Q8NCE0 465 aaKnown RBP7.4□□□□□ -1.22
EPB41-213ENST00000636666 TGFBRAP1Q8WUH2 860 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 GGT7Q9UJ14 662 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 NOVA2Q9UNW9 492 aaKnown RBP7.4□□□□□ -1.22
EPB41-213ENST00000636666 PLAAQ9Y263 795 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.4□□□□□ -1.22
EPB41-213ENST00000636666 DIP2AQ14689 1571 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 DIP2BQ9P265 1576 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 XRN1Q8IZH2 1706 aaKnown RBP7.4□□□□□ -1.22
EPB41-213ENST00000636666 POTEMA6NI47 508 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 ERVV-2B6SEH9 535 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 KLRF2D3W0D1 207 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 PSMD14O00487 310 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 SEMA3EO15041 775 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 CCNE1P24864 410 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 PEX19P40855 299 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 SLCO1A2P46721 670 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 SLC20A2Q08357 652 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 PLS1Q14651 629 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 USP17L2Q6R6M4 530 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 CCDC84Q86UT8 332 aaPredicted RBP7.4□□□□□ -1.22
EPB41-213ENST00000636666 RNPC3Q96LT9 517 aaKnown RBP7.4□□□□□ -1.22
EPB41-213ENST00000636666 PAIP2Q9BPZ3 127 aaKnown RBP7.4□□□□□ -1.22
EPB41-213ENST00000636666 DDX47Q9H0S4 455 aaKnown RBP7.4□□□□□ -1.22
EPB41-213ENST00000636666 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.4□□□□□ -1.226e-7■■□□□ 12.6
EPB41-213ENST00000636666 TACC3Q9Y6A5 838 aa7.4□□□□□ -1.22
EPB41-213ENST00000636666 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms