RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 SOWAHBA6NEL2 793 aa21.46■■□□□ 1.03
CLN6-214ENST00000636314 E7EWF7 191 aa21.46■■□□□ 1.03
CLN6-214ENST00000636314 NFIBO00712 420 aa21.46■■□□□ 1.03
CLN6-214ENST00000636314 TIMP1P01033 207 aa21.46■■□□□ 1.03
CLN6-214ENST00000636314 SEC23AQ15436 765 aa21.46■■□□□ 1.03
CLN6-214ENST00000636314 CCDC136Q96JN2 1154 aa21.46■■□□□ 1.03
CLN6-214ENST00000636314 GLT1D1Q96MS3 346 aa21.46■■□□□ 1.03
CLN6-214ENST00000636314 ESYT1Q9BSJ8 1104 aa21.46■■□□□ 1.03
CLN6-214ENST00000636314 TAF6LQ9Y6J9 622 aa21.46■■□□□ 1.03
CLN6-214ENST00000636314 MROH7Q68CQ1 1323 aa21.46■■□□□ 1.03
CLN6-214ENST00000636314 ERICH2A1L162 156 aa21.45■■□□□ 1.02
CLN6-214ENST00000636314 PTPDC1A2A3K4 754 aa21.45■■□□□ 1.02
CLN6-214ENST00000636314 DHX16O60231 1041 aaKnown RBP21.45■■□□□ 1.02
CLN6-214ENST00000636314 DUSP11O75319 330 aaKnown RBP21.45■■□□□ 1.02
CLN6-214ENST00000636314 C6orf222P0C671 652 aaPredicted RBP21.45■■□□□ 1.02
CLN6-214ENST00000636314 CDC37Q16543 378 aaPredicted RBP21.45■■□□□ 1.02
CLN6-214ENST00000636314 SYMPKQ92797 1274 aaKnown RBP21.45■■□□□ 1.02
CLN6-214ENST00000636314 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.45■■□□□ 1.02
CLN6-214ENST00000636314 SPC25Q9HBM1 224 aa21.45■■□□□ 1.02
CLN6-214ENST00000636314 GBF1Q92538 1859 aa21.44■■□□□ 1.02
CLN6-214ENST00000636314 IFIT3O14879 490 aaKnown RBP21.44■■□□□ 1.02
CLN6-214ENST00000636314 IRX5P78411 483 aaPredicted RBP21.44■■□□□ 1.02
CLN6-214ENST00000636314 BAATQ14032 418 aaPredicted RBP21.44■■□□□ 1.02
CLN6-214ENST00000636314 SART3Q15020 963 aaKnown RBP21.44■■□□□ 1.02
CLN6-214ENST00000636314 CCDC144BQ3MJ40 725 aa21.44■■□□□ 1.02
CLN6-214ENST00000636314 USH1GQ495M9 461 aa21.44■■□□□ 1.02
CLN6-214ENST00000636314 CCSAPQ6IQ19 270 aaPredicted RBP21.44■■□□□ 1.02
CLN6-214ENST00000636314 MFSD5Q6N075 450 aa21.44■■□□□ 1.02
CLN6-214ENST00000636314 STOX1Q6ZVD7 989 aa21.44■■□□□ 1.02
CLN6-214ENST00000636314 PCSK9Q8NBP7 692 aaKnown RBP21.44■■□□□ 1.02
CLN6-214ENST00000636314 TIFAQ96CG3 184 aa21.44■■□□□ 1.02
CLN6-214ENST00000636314 ZNF576Q9H609 170 aa21.44■■□□□ 1.02
CLN6-214ENST00000636314 TBX21Q9UL17 535 aa21.44■■□□□ 1.02
CLN6-214ENST00000636314 ASTN1O14525 1302 aa21.44■■□□□ 1.02
CLN6-214ENST00000636314 ASGR1P07306 291 aa21.43■■□□□ 1.02
CLN6-214ENST00000636314 PPIGQ13427 754 aaKnown RBP eCLIP21.43■■□□□ 1.027e-7■□□□□ 9.4
CLN6-214ENST00000636314 SLC30A10Q6XR72 485 aa21.43■■□□□ 1.02
CLN6-214ENST00000636314 ADGRF4Q8IZF3 695 aa21.43■■□□□ 1.02
CLN6-214ENST00000636314 USP38Q8NB14 1042 aa21.43■■□□□ 1.02
CLN6-214ENST00000636314 CLEC4DQ8WXI8 215 aa21.43■■□□□ 1.02
CLN6-214ENST00000636314 KATNBL1Q9H079 304 aa21.43■■□□□ 1.02
CLN6-214ENST00000636314 LSG1Q9H089 658 aaKnown RBP21.43■■□□□ 1.02
CLN6-214ENST00000636314 ANO2Q9NQ90 1003 aa21.43■■□□□ 1.02
CLN6-214ENST00000636314 ADD3Q9UEY8 706 aaKnown RBP21.43■■□□□ 1.02
CLN6-214ENST00000636314 ELP1O95163 1332 aa21.43■■□□□ 1.02
CLN6-214ENST00000636314 ADCY6O43306 1168 aa21.42■■□□□ 1.02
CLN6-214ENST00000636314 NEFLP07196 543 aa21.42■■□□□ 1.02
CLN6-214ENST00000636314 CALML3P27482 149 aa21.42■■□□□ 1.02
CLN6-214ENST00000636314 CST5P28325 142 aaPredicted RBP21.42■■□□□ 1.02
CLN6-214ENST00000636314 MYO9BQ13459 2157 aa21.42■■□□□ 1.02
CLN6-214ENST00000636314 WTAPQ15007 396 aa21.42■■□□□ 1.02
CLN6-214ENST00000636314 RNF207Q6ZRF8 634 aa21.42■■□□□ 1.02
CLN6-214ENST00000636314 PURBQ96QR8 312 aaKnown RBP21.42■■□□□ 1.02
CLN6-214ENST00000636314 PRDM6Q9NQX0 595 aa21.42■■□□□ 1.02
CLN6-214ENST00000636314 A0A0U1RQG5 324 aaPredicted RBP21.41■■□□□ 1.02
CLN6-214ENST00000636314 ALDH5A1P51649 535 aaPredicted RBP21.41■■□□□ 1.02
CLN6-214ENST00000636314 CASC1Q6TDU7 716 aa21.41■■□□□ 1.02
CLN6-214ENST00000636314 CHST3Q7LGC8 479 aa21.41■■□□□ 1.02
CLN6-214ENST00000636314 FBXO16Q8IX29 292 aaPredicted RBP21.41■■□□□ 1.02
CLN6-214ENST00000636314 PPP1R12CQ9BZL4 782 aa21.41■■□□□ 1.02
CLN6-214ENST00000636314 DDX49Q9Y6V7 483 aaKnown RBP21.41■■□□□ 1.02
CLN6-214ENST00000636314 ABCB11O95342 1321 aa21.4■■□□□ 1.02
CLN6-214ENST00000636314 ARVCFO00192 962 aa21.4■■□□□ 1.02
CLN6-214ENST00000636314 TLR3O15455 904 aaKnown RBP21.4■■□□□ 1.02
CLN6-214ENST00000636314 CDK7P50613 346 aa21.4■■□□□ 1.02
CLN6-214ENST00000636314 GJA9P57773 515 aa21.4■■□□□ 1.02
CLN6-214ENST00000636314 RPS6P62753 249 aaKnown RBP21.4■■□□□ 1.02
CLN6-214ENST00000636314 QRICH1Q2TAL8 776 aa21.4■■□□□ 1.02
CLN6-214ENST00000636314 TMEM67Q5HYA8 995 aa21.4■■□□□ 1.02
CLN6-214ENST00000636314 GNASQ5JWF2 1037 aa21.4■■□□□ 1.02
CLN6-214ENST00000636314 TMEM240Q5SV17 173 aa21.4■■□□□ 1.02
CLN6-214ENST00000636314 NOL8Q76FK4 1167 aaKnown RBP21.4■■□□□ 1.02
CLN6-214ENST00000636314 EEPD1Q7L9B9 569 aa21.4■■□□□ 1.02
CLN6-214ENST00000636314 MB21D2Q8IYB1 491 aaPredicted RBP21.4■■□□□ 1.02
CLN6-214ENST00000636314 STAG2Q8N3U4 1231 aa21.4■■□□□ 1.02
CLN6-214ENST00000636314 TMEM199Q8N511 208 aa21.4■■□□□ 1.02
CLN6-214ENST00000636314 PPM1EQ8WY54 764 aa21.4■■□□□ 1.02
CLN6-214ENST00000636314 GAS2L1Q99501 681 aaPredicted RBP21.4■■□□□ 1.02
CLN6-214ENST00000636314 UPF3AQ9H1J1 476 aaKnown RBP21.4■■□□□ 1.02
CLN6-214ENST00000636314 VAT1LQ9HCJ6 419 aa21.4■■□□□ 1.02
CLN6-214ENST00000636314 LOC102724159A0A0B4J2E5 919 aa21.39■■□□□ 1.01
CLN6-214ENST00000636314 GRXCR1A8MXD5 290 aa21.39■■□□□ 1.01
CLN6-214ENST00000636314 KLRF2D3W0D1 207 aa21.39■■□□□ 1.01
CLN6-214ENST00000636314 ACRP10323 421 aa21.39■■□□□ 1.01
CLN6-214ENST00000636314 CSF2RAP15509 400 aa21.39■■□□□ 1.01
CLN6-214ENST00000636314 PBX2P40425 430 aa21.39■■□□□ 1.01
CLN6-214ENST00000636314 ANTXR2P58335 489 aa21.39■■□□□ 1.01
CLN6-214ENST00000636314 TNFAIP2Q03169 654 aa21.39■■□□□ 1.01
CLN6-214ENST00000636314 PWP2Q15269 919 aaKnown RBP21.39■■□□□ 1.01
CLN6-214ENST00000636314 TJAP1Q5JTD0 557 aa21.39■■□□□ 1.01
CLN6-214ENST00000636314 MPHOSPH6Q99547 160 aaKnown RBP21.39■■□□□ 1.01
CLN6-214ENST00000636314 JMJD4Q9H9V9 463 aa21.39■■□□□ 1.01
CLN6-214ENST00000636314 VTA1Q9NP79 307 aa21.39■■□□□ 1.01
CLN6-214ENST00000636314 MAD2L2Q9UI95 211 aa21.39■■□□□ 1.01
CLN6-214ENST00000636314 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.38■■□□□ 1.01
CLN6-214ENST00000636314 SLC27A2O14975 620 aa21.38■■□□□ 1.01
CLN6-214ENST00000636314 CDC45O75419 566 aa21.38■■□□□ 1.01
CLN6-214ENST00000636314 GRM4Q14833 912 aa21.38■■□□□ 1.01
CLN6-214ENST00000636314 C16orf59Q7L2K0 433 aa21.38■■□□□ 1.01
CLN6-214ENST00000636314 FBXO11Q86XK2 927 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms