RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306		B4E1Z4	1266 aa		11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	PDLIM1	O00151	329 aa		11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	IFIT3	O14879	490 aa	Known RBP	11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	ONECUT3	O60422	494 aa	Predicted RBP	11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	LUC7L3	O95232	432 aa	Known RBP	11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	ATP6V1G2	O95670	118 aa		11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	SYK	P43405	635 aa		11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	EPHB4	P54760	987 aa		11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	MKRN4P	Q13434	485 aa	Predicted RBP	11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	ZNF662	Q6ZS27	426 aa		11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	LCORL	Q8N3X6	602 aa		11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	ARFGAP2	Q8N6H7	521 aa		11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	BRIP1	Q9BX63	1249 aa		11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	RABEP2	Q9H5N1	569 aa		11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	NOD2	Q9HC29	1040 aa		11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	RGL1	Q9NZL6	768 aa		11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	ABCF2	Q9UG63	623 aa		11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	ANAPC4	Q9UJX5	808 aa		11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	SAR1B	Q9Y6B6	198 aa		11.94	□□□□□ -0.5
CHD2-223	ENST00000636306	TAF1	P21675	1872 aa		11.93	□□□□□ -0.5
CHD2-223	ENST00000636306		A6NHS1	94 aa		11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	PPP1R12B	O60237	982 aa	Predicted RBP	11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	BUB1B	O60566	1050 aa	Predicted RBP	11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	MFAP3L	O75121	409 aa		11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	SKAP2	O75563	359 aa	Predicted RBP	11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	RPSA	P08865	295 aa	Known RBP	11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	PBX1	P40424	430 aa		11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	MDH1	P40925	334 aa	Known RBP	11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	GLE1	Q53GS7	698 aa	Known RBP	11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	SLC27A3	Q5K4L6	730 aa		11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	SPECC1	Q5M775	1068 aa		11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	FBXO33	Q7Z6M2	555 aa		11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	CNBD1	Q8NA66	436 aa		11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	NSMCE1	Q8WV22	266 aa		11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	ESR2	Q92731	530 aa		11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	ARHGEF1	Q92888	912 aa	Known RBP	11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	CNKSR1	Q969H4	720 aa		11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	DTNBP1	Q96EV8	351 aa		11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	KDM4C	Q9H3R0	1056 aa		11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	HAUS2	Q9NVX0	235 aa		11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	SRP68	Q9UHB9	627 aa	Known RBP	11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	HPS5	Q9UPZ3	1129 aa		11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	SLC12A7	Q9Y666	1083 aa		11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	COL4A1	P02462	1669 aa		11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	COL1A1	P02452	1464 aa	Predicted RBP	11.93	□□□□□ -0.5
CHD2-223	ENST00000636306	HIBADH	P31937	336 aa	Known RBP	11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	PEX19	P40855	299 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	GYG1	P46976	350 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	BLMH	Q13867	455 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	WTAP	Q15007	396 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	CCDC181	Q5TID7	509 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	CYB5R4	Q7L1T6	521 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	ZNF572	Q7Z3I7	529 aa	Predicted RBP	11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	TRIM22	Q8IYM9	498 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	TEX9	Q8N6V9	391 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	TRIML1	Q8N9V2	468 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	CELF1	Q92879	486 aa	Known RBP	11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	ARL8A	Q96BM9	186 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	MMS19	Q96T76	1030 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	UBAC1	Q9BSL1	405 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	HAUS4	Q9H6D7	363 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	LY9	Q9HBG7	655 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	LEMD3	Q9Y2U8	911 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	CLIC4	Q9Y696	253 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	C5orf60	A6NFR6	353 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	ENO4	A6NNW6	628 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	ABLIM1	O14639	778 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	PPP6R2	O75170	966 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	GSTA1	P08263	222 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	IARS	P41252	1262 aa	Known RBP	11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	SCTR	P47872	440 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	PAPOLA	P51003	745 aa	Known RBP	11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	ELF3	P78545	371 aa	Predicted RBP	11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	PPARA	Q07869	468 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	RBL2	Q08999	1139 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	GRAP	Q13588	217 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	SETDB1	Q15047	1291 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	ANO1	Q5XXA6	986 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	CYP26C1	Q6V0L0	522 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	C3orf67	Q6ZVT6	689 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	GRAPL	Q8TC17	118 aa	Predicted RBP	11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	EZH1	Q92800	747 aa	Predicted RBP	11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	RNPC3	Q96LT9	517 aa	Known RBP	11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	CTAGE1	Q96RT6	745 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	MMTAG2	Q9BU76	263 aa	Known RBP	11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	NOP53	Q9NZM5	478 aa	Known RBP	11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	PCDHGC5	Q9Y5F6	944 aa		11.92	□□□□□ -0.5
CHD2-223	ENST00000636306	ANO9	A1A5B4	782 aa		11.91	□□□□□ -0.5
CHD2-223	ENST00000636306	HMGB1P1	B2RPK0	211 aa	Predicted RBP	11.91	□□□□□ -0.5
CHD2-223	ENST00000636306	ERCC5	P28715	1186 aa	Predicted RBP	11.91	□□□□□ -0.5
CHD2-223	ENST00000636306	HDLBP	Q00341	1268 aa	Known RBP	11.91	□□□□□ -0.5
CHD2-223	ENST00000636306	SSRP1	Q08945	709 aa	Known RBP	11.91	□□□□□ -0.5
CHD2-223	ENST00000636306	TRIM14	Q14142	442 aa		11.91	□□□□□ -0.5
CHD2-223	ENST00000636306	SLC39A14	Q15043	492 aa		11.91	□□□□□ -0.5
CHD2-223	ENST00000636306	C1QTNF12	Q5T7M4	302 aa		11.91	□□□□□ -0.5
CHD2-223	ENST00000636306	MYSM1	Q5VVJ2	828 aa		11.91	□□□□□ -0.5
CHD2-223	ENST00000636306	MSL1	Q68DK7	614 aa		11.91	□□□□□ -0.5
CHD2-223	ENST00000636306	MTHFD1L	Q6UB35	978 aa		11.91	□□□□□ -0.5

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