RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 LINC00301Q8NCQ3 95 aa10.95□□□□□ -0.66
CACNA1A-223ENST00000636058 LEO1Q8WVC0 666 aaPredicted RBP10.95□□□□□ -0.66
CACNA1A-223ENST00000636058 TRERF1Q96PN7 1200 aa10.95□□□□□ -0.66
CACNA1A-223ENST00000636058 MAF1Q9H063 256 aa10.95□□□□□ -0.66
CACNA1A-223ENST00000636058 ZCCHC17Q9NP64 241 aaKnown RBP10.95□□□□□ -0.66
CACNA1A-223ENST00000636058 RNF146Q9NTX7 359 aa10.95□□□□□ -0.66
CACNA1A-223ENST00000636058 MAP3K20Q9NYL2 800 aaKnown RBP10.95□□□□□ -0.66
CACNA1A-223ENST00000636058 RBPJLQ9UBG7 517 aa10.95□□□□□ -0.66
CACNA1A-223ENST00000636058 RCOR1Q9UKL0 485 aa10.95□□□□□ -0.66
CACNA1A-223ENST00000636058 PCDHB6Q9Y5E3 794 aa10.95□□□□□ -0.66
CACNA1A-223ENST00000636058 CLIC4Q9Y696 253 aa10.95□□□□□ -0.66
CACNA1A-223ENST00000636058 WNT7AO00755 349 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 PEX10O60683 326 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 HOXA13P31271 388 aaPredicted RBP10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 APLP1P51693 650 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 INHBEP58166 350 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 CEBPZQ03701 1054 aaKnown RBP10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 NBR1Q14596 966 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 PLS1Q14651 629 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 PTPAQ15257 358 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 SF3A1Q15459 793 aaKnown RBP10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 CSPP1Q1MSJ5 1256 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 TTC38Q5R3I4 469 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 NEK8Q86SG6 692 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 RIOX2Q8IUF8 465 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 CHST13Q8NET6 341 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 TBCKQ8TEA7 893 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 CRYGNQ8WXF5 182 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 TBC1D5Q92609 795 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 PGBD1Q96JS3 809 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 SPATA32Q96LK8 384 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 PARK7Q99497 189 aaKnown RBP10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 ANO3Q9BYT9 981 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 SPATC1LQ9H0A9 340 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 ACAD9Q9H845 621 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 TXNRD2Q9NNW7 524 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 CREBZFQ9NS37 354 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 HOMER2Q9NSB8 354 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 LMBRD1Q9NUN5 540 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 RABGAP1Q9Y3P9 1069 aa10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 MORC2Q9Y6X9 1032 aaPredicted RBP10.94□□□□□ -0.66
CACNA1A-223ENST00000636058 RASSF10A6NK89 507 aa10.93□□□□□ -0.66
CACNA1A-223ENST00000636058 SPDYE3A6NKU9 549 aa10.93□□□□□ -0.66
CACNA1A-223ENST00000636058 IGF2BP3O00425 579 aaKnown RBP eCLIP10.93□□□□□ -0.66
CACNA1A-223ENST00000636058 EDIL3O43854 480 aa10.93□□□□□ -0.66
CACNA1A-223ENST00000636058 PRPF40AO75400 957 aaKnown RBP10.93□□□□□ -0.66
CACNA1A-223ENST00000636058 ATP2B1P20020 1258 aa10.93□□□□□ -0.66
CACNA1A-223ENST00000636058 GCLCP48506 637 aaPredicted RBP10.93□□□□□ -0.66
CACNA1A-223ENST00000636058 SLC39A14Q15043 492 aa10.93□□□□□ -0.66
CACNA1A-223ENST00000636058 KCNG4Q8TDN1 519 aa10.93□□□□□ -0.66
CACNA1A-223ENST00000636058 SMCR8Q8TEV9 937 aaPredicted RBP10.93□□□□□ -0.66
CACNA1A-223ENST00000636058 PAGR1Q9BTK6 254 aa10.93□□□□□ -0.66
CACNA1A-223ENST00000636058 MOV10L1Q9BXT6 1211 aaKnown RBP10.93□□□□□ -0.66
CACNA1A-223ENST00000636058 MYH7BA7E2Y1 1941 aa10.93□□□□□ -0.66
CACNA1A-223ENST00000636058 ADGRA2Q96PE1 1338 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 SPTLC2O15270 562 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 PPP6R2O75170 966 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 SLC25A27O95847 323 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 BMP15O95972 392 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 PTMSP20962 102 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 COPB2P35606 906 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 SREBF1P36956 1147 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 TM4SF4P48230 202 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 RPS6P62753 249 aaKnown RBP10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 ERVK-9P63128 1117 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 ERVK-24P63145 666 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 SREBF2Q12772 1141 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 ORC2Q13416 577 aaPredicted RBP10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 STK38Q15208 465 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 ZNF174Q15697 407 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 LETM2Q2VYF4 491 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 Q3C1V9 767 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 CYP4F22Q6NT55 531 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 SLC30A10Q6XR72 485 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 RNF207Q6ZRF8 634 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 FCHSD1Q86WN1 690 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 IFNL1Q8IU54 200 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 SYTL5Q8TDW5 730 aaPredicted RBP10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 COL20A1Q9P218 1284 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 MORF4L1Q9UBU8 362 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 FBXO40Q9UH90 709 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 CEP131Q9UPN4 1083 aa10.92□□□□□ -0.66
CACNA1A-223ENST00000636058 FRMPD4Q14CM0 1322 aa10.91□□□□□ -0.66
CACNA1A-223ENST00000636058 RPTORQ8N122 1335 aa10.91□□□□□ -0.66
CACNA1A-223ENST00000636058 CYP3A4P08684 503 aa10.91□□□□□ -0.66
CACNA1A-223ENST00000636058 ERCC3P19447 782 aa10.91□□□□□ -0.66
CACNA1A-223ENST00000636058 MCM7P33993 719 aa10.91□□□□□ -0.66
CACNA1A-223ENST00000636058 USP11P51784 963 aa10.91□□□□□ -0.66
CACNA1A-223ENST00000636058 ARHGAP4P98171 946 aa10.91□□□□□ -0.66
CACNA1A-223ENST00000636058 ATP2C1P98194 919 aaPredicted RBP10.91□□□□□ -0.66
CACNA1A-223ENST00000636058 NOGQ13253 232 aa10.91□□□□□ -0.66
CACNA1A-223ENST00000636058 BAATQ14032 418 aaPredicted RBP10.91□□□□□ -0.66
CACNA1A-223ENST00000636058 DEFB115Q30KQ5 88 aa10.91□□□□□ -0.66
CACNA1A-223ENST00000636058 PPP4R3AQ6IN85 833 aa10.91□□□□□ -0.66
CACNA1A-223ENST00000636058 MOXD1Q6UVY6 613 aa10.91□□□□□ -0.66
CACNA1A-223ENST00000636058 NSMFQ6X4W1 530 aa10.91□□□□□ -0.66
CACNA1A-223ENST00000636058 ANKRD13CQ8N6S4 541 aa10.91□□□□□ -0.66
CACNA1A-223ENST00000636058 C4orf32Q8N8J7 132 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms