RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 WTAPQ15007 396 aa17.59■□□□□ 0.41
CLN8-209ENST00000635970 SART3Q15020 963 aaKnown RBP17.59■□□□□ 0.41
CLN8-209ENST00000635970 C17orf99Q6UX52 265 aa17.59■□□□□ 0.41
CLN8-209ENST00000635970 FILIP1Q7Z7B0 1213 aa17.59■□□□□ 0.41
CLN8-209ENST00000635970 KCNG4Q8TDN1 519 aa17.59■□□□□ 0.41
CLN8-209ENST00000635970 ZNF296Q8WUU4 475 aaPredicted RBP17.59■□□□□ 0.41
CLN8-209ENST00000635970 GMCL1Q96IK5 515 aa17.59■□□□□ 0.41
CLN8-209ENST00000635970 LY9Q9HBG7 655 aa17.59■□□□□ 0.41
CLN8-209ENST00000635970 TXNRD2Q9NNW7 524 aa17.59■□□□□ 0.41
CLN8-209ENST00000635970 SH2B2O14492 632 aaPredicted RBP17.59■□□□□ 0.41
CLN8-209ENST00000635970 CTDNEP1O95476 244 aa17.59■□□□□ 0.41
CLN8-209ENST00000635970 PDHBP11177 359 aa17.59■□□□□ 0.41
CLN8-209ENST00000635970 BMP3P12645 472 aa17.59■□□□□ 0.41
CLN8-209ENST00000635970 TERF2Q15554 542 aa17.59■□□□□ 0.41
CLN8-209ENST00000635970 CCDC96Q2M329 555 aa17.59■□□□□ 0.41
CLN8-209ENST00000635970 KMT5BQ4FZB7 885 aa17.59■□□□□ 0.41
CLN8-209ENST00000635970 SDF4Q9BRK5 362 aa17.59■□□□□ 0.41
CLN8-209ENST00000635970 KIAA1468Q9P260 1216 aa17.59■□□□□ 0.41
CLN8-209ENST00000635970 CENPFP49454 3210 aa17.58■□□□□ 0.41
CLN8-209ENST00000635970 USP27XA6NNY8 438 aa17.58■□□□□ 0.4
CLN8-209ENST00000635970 YEATS4O95619 227 aa17.58■□□□□ 0.4
CLN8-209ENST00000635970 BCRP11274 1271 aa17.58■□□□□ 0.4
CLN8-209ENST00000635970 CAP1Q01518 475 aa17.58■□□□□ 0.4
CLN8-209ENST00000635970 ATG4CQ96DT6 458 aa17.58■□□□□ 0.4
CLN8-209ENST00000635970 PAGR1Q9BTK6 254 aa17.58■□□□□ 0.4
CLN8-209ENST00000635970 HTTP42858 3142 aa17.58■□□□□ 0.4
CLN8-209ENST00000635970 TMEM232C9JQI7 657 aa17.57■□□□□ 0.4
CLN8-209ENST00000635970 CEBPZQ03701 1054 aaKnown RBP17.57■□□□□ 0.4
CLN8-209ENST00000635970 BMS1Q14692 1282 aaKnown RBP17.57■□□□□ 0.4
CLN8-209ENST00000635970 COG2Q14746 738 aa17.57■□□□□ 0.4
CLN8-209ENST00000635970 AOPEPQ8N6M6 819 aa17.57■□□□□ 0.4
CLN8-209ENST00000635970 DHX16O60231 1041 aaKnown RBP17.57■□□□□ 0.4
CLN8-209ENST00000635970 GOLGA8HP0CJ92 632 aa17.57■□□□□ 0.4
CLN8-209ENST00000635970 SNHG28P0DPA3 235 aa17.57■□□□□ 0.4
CLN8-209ENST00000635970 DSG3P32926 999 aa17.57■□□□□ 0.4
CLN8-209ENST00000635970 TTBK2Q6IQ55 1244 aa17.57■□□□□ 0.4
CLN8-209ENST00000635970 DCAF4Q8WV16 495 aa17.57■□□□□ 0.4
CLN8-209ENST00000635970 TMEM87BQ96K49 555 aa17.57■□□□□ 0.4
CLN8-209ENST00000635970 MYL10Q9BUA6 226 aa17.57■□□□□ 0.4
CLN8-209ENST00000635970 POLR3EQ9NVU0 708 aa17.57■□□□□ 0.4
CLN8-209ENST00000635970 RBPJLQ9UBG7 517 aa17.57■□□□□ 0.4
CLN8-209ENST00000635970 PPP1R9AQ9ULJ8 1098 aa17.57■□□□□ 0.4
CLN8-209ENST00000635970 PCDHA7Q9UN72 937 aa17.57■□□□□ 0.4
CLN8-209ENST00000635970 CNMDO75829 334 aa17.56■□□□□ 0.4
CLN8-209ENST00000635970 SFPQP23246 707 aaKnown RBP eCLIP17.56■□□□□ 0.4
CLN8-209ENST00000635970 SP3Q02447 781 aa17.56■□□□□ 0.4
CLN8-209ENST00000635970 ARID5BQ14865 1188 aa17.56■□□□□ 0.4
CLN8-209ENST00000635970 BRAPQ7Z569 592 aa17.56■□□□□ 0.4
CLN8-209ENST00000635970 NBPF11Q86T75 865 aa17.56■□□□□ 0.4
CLN8-209ENST00000635970 KIFC2Q96AC6 838 aa17.56■□□□□ 0.4
CLN8-209ENST00000635970 SLF1Q9BQI6 1058 aa17.56■□□□□ 0.4
CLN8-209ENST00000635970 SRRTQ9BXP5 876 aaKnown RBP17.56■□□□□ 0.4
CLN8-209ENST00000635970 ARHGAP39Q9C0H5 1083 aa17.56■□□□□ 0.4
CLN8-209ENST00000635970 GPCPD1Q9NPB8 672 aa17.56■□□□□ 0.4
CLN8-209ENST00000635970 BTBD7Q9P203 1132 aa17.56■□□□□ 0.4
CLN8-209ENST00000635970 IKBKBO14920 756 aa17.55■□□□□ 0.4
CLN8-209ENST00000635970 PDIA3P30101 505 aaKnown RBP17.55■□□□□ 0.4
CLN8-209ENST00000635970 GCLCP48506 637 aaPredicted RBP17.55■□□□□ 0.4
CLN8-209ENST00000635970 STAT2P52630 851 aa17.55■□□□□ 0.4
CLN8-209ENST00000635970 IKQ13123 557 aaPredicted RBP17.55■□□□□ 0.4
CLN8-209ENST00000635970 NAA30Q147X3 362 aaPredicted RBP17.55■□□□□ 0.4
CLN8-209ENST00000635970 FAM110CQ1W6H9 321 aa17.55■□□□□ 0.4
CLN8-209ENST00000635970 RAB11FIP4Q86YS3 637 aa17.55■□□□□ 0.4
CLN8-209ENST00000635970 CD99L2Q8TCZ2 262 aa17.55■□□□□ 0.4
CLN8-209ENST00000635970 CPVLQ9H3G5 476 aa17.55■□□□□ 0.4
CLN8-209ENST00000635970 WDR19Q8NEZ3 1342 aa17.55■□□□□ 0.4
CLN8-209ENST00000635970 FKTNO75072 461 aa17.55■□□□□ 0.4
CLN8-209ENST00000635970 CTGFP29279 349 aa17.55■□□□□ 0.4
CLN8-209ENST00000635970 SLC16A2P36021 539 aa17.55■□□□□ 0.4
CLN8-209ENST00000635970 ZNF543Q08ER8 600 aa17.55■□□□□ 0.4
CLN8-209ENST00000635970 APOBRQ0VD83 1088 aa17.55■□□□□ 0.4
CLN8-209ENST00000635970 NOM1Q5C9Z4 860 aaKnown RBP17.55■□□□□ 0.4
CLN8-209ENST00000635970 FBXO38Q6PIJ6 1188 aa17.55■□□□□ 0.4
CLN8-209ENST00000635970 LBX2Q6XYB7 198 aa17.55■□□□□ 0.4
CLN8-209ENST00000635970 LINC00301Q8NCQ3 95 aa17.55■□□□□ 0.4
CLN8-209ENST00000635970 MTA3Q9BTC8 594 aa17.55■□□□□ 0.4
CLN8-209ENST00000635970 FEM1BQ9UK73 627 aa17.55■□□□□ 0.4
CLN8-209ENST00000635970 MYPNQ86TC9 1320 aa17.54■□□□□ 0.4
CLN8-209ENST00000635970 TPM1P09493 284 aa17.54■□□□□ 0.4
CLN8-209ENST00000635970 H2AFXP16104 143 aaPredicted RBP17.54■□□□□ 0.4
CLN8-209ENST00000635970 RXRAP19793 462 aa17.54■□□□□ 0.4
CLN8-209ENST00000635970 NLRP12P59046 1061 aa17.54■□□□□ 0.4
CLN8-209ENST00000635970 ERVK-9P63128 1117 aa17.54■□□□□ 0.4
CLN8-209ENST00000635970 ERVK-24P63145 666 aa17.54■□□□□ 0.4
CLN8-209ENST00000635970 Q3C1V9 767 aa17.54■□□□□ 0.4
CLN8-209ENST00000635970 NFXL1Q6ZNB6 911 aa17.54■□□□□ 0.4
CLN8-209ENST00000635970 ZNF654Q8IZM8 581 aa17.54■□□□□ 0.4
CLN8-209ENST00000635970 TIGD1Q96MW7 591 aa17.54■□□□□ 0.4
CLN8-209ENST00000635970 TRMT1Q9NXH9 659 aaKnown RBP17.54■□□□□ 0.4
CLN8-209ENST00000635970 HOXC10Q9NYD6 342 aa17.54■□□□□ 0.4
CLN8-209ENST00000635970 MYH6P13533 1939 aa17.54■□□□□ 0.4
CLN8-209ENST00000635970 DOCK3Q8IZD9 2030 aa17.54■□□□□ 0.4
CLN8-209ENST00000635970 VWA5AO00534 786 aa17.53■□□□□ 0.4
CLN8-209ENST00000635970 LACTBP83111 547 aaPredicted RBP17.53■□□□□ 0.4
CLN8-209ENST00000635970 TROAPQ12815 778 aa17.53■□□□□ 0.4
CLN8-209ENST00000635970 SF3A1Q15459 793 aaKnown RBP17.53■□□□□ 0.4
CLN8-209ENST00000635970 E4F1Q66K89 784 aaPredicted RBP17.53■□□□□ 0.4
CLN8-209ENST00000635970 STAG2Q8N3U4 1231 aa17.53■□□□□ 0.4
CLN8-209ENST00000635970 PPP1R13BQ96KQ4 1090 aa17.53■□□□□ 0.4
CLN8-209ENST00000635970 MORF4L1Q9UBU8 362 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms