RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 ICAM1P05362 532 aa17.19■□□□□ 0.34
HSPG2-214ENST00000635682 C6orf222P0C671 652 aaPredicted RBP17.19■□□□□ 0.34
HSPG2-214ENST00000635682 RAG1P15918 1043 aa17.19■□□□□ 0.34
HSPG2-214ENST00000635682 HSPA4P34932 840 aa17.19■□□□□ 0.34
HSPG2-214ENST00000635682 TRAF1Q13077 416 aa17.19■□□□□ 0.34
HSPG2-214ENST00000635682 CCDC144BQ3MJ40 725 aa17.19■□□□□ 0.34
HSPG2-214ENST00000635682 CCSAPQ6IQ19 270 aaPredicted RBP17.19■□□□□ 0.34
HSPG2-214ENST00000635682 BLOC1S2Q6QNY1 142 aa17.19■□□□□ 0.34
HSPG2-214ENST00000635682 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.19■□□□□ 0.342e-6■□□□□ 10.9
HSPG2-214ENST00000635682 CCDC144CPQ8IYA2 1237 aa17.19■□□□□ 0.34
HSPG2-214ENST00000635682 TRERF1Q96PN7 1200 aa17.19■□□□□ 0.34
HSPG2-214ENST00000635682 UBA5Q9GZZ9 404 aa17.19■□□□□ 0.34
HSPG2-214ENST00000635682 RANBP17Q9H2T7 1088 aaKnown RBP17.19■□□□□ 0.34
HSPG2-214ENST00000635682 VAT1LQ9HCJ6 419 aa17.19■□□□□ 0.34
HSPG2-214ENST00000635682 NAP1L2Q9ULW6 460 aaPredicted RBP17.19■□□□□ 0.34
HSPG2-214ENST00000635682 SLC12A7Q9Y666 1083 aa17.19■□□□□ 0.34
HSPG2-214ENST00000635682 CUL9Q8IWT3 2517 aa17.19■□□□□ 0.34
HSPG2-214ENST00000635682 KLRF2D3W0D1 207 aa17.18■□□□□ 0.34
HSPG2-214ENST00000635682 KIAA0355O15063 1070 aa17.18■□□□□ 0.34
HSPG2-214ENST00000635682 DDAH1O94760 285 aa17.18■□□□□ 0.34
HSPG2-214ENST00000635682 FAAP100Q0VG06 881 aa17.18■□□□□ 0.34
HSPG2-214ENST00000635682 TSGA10IPQ3SY00 556 aa17.18■□□□□ 0.34
HSPG2-214ENST00000635682 ZNF697Q5TEC3 545 aa17.18■□□□□ 0.34
HSPG2-214ENST00000635682 DHX32Q7L7V1 743 aaKnown RBP17.18■□□□□ 0.34
HSPG2-214ENST00000635682 VTI1AQ96AJ9 217 aa17.18■□□□□ 0.34
HSPG2-214ENST00000635682 JAKMIP1Q96N16 626 aaKnown RBP17.18■□□□□ 0.34
HSPG2-214ENST00000635682 ABHD16BQ9H3Z7 469 aa17.18■□□□□ 0.34
HSPG2-214ENST00000635682 DDX49Q9Y6V7 483 aaKnown RBP17.18■□□□□ 0.34
HSPG2-214ENST00000635682 ZNF536O15090 1300 aa17.18■□□□□ 0.34
HSPG2-214ENST00000635682 WDR19Q8NEZ3 1342 aa17.18■□□□□ 0.34
HSPG2-214ENST00000635682 MOXD2PA6NHM9 499 aa17.17■□□□□ 0.34
HSPG2-214ENST00000635682 DCDC2CA8MYV0 355 aa17.17■□□□□ 0.34
HSPG2-214ENST00000635682 SH2B2O14492 632 aaPredicted RBP17.17■□□□□ 0.34
HSPG2-214ENST00000635682 ASGR1P07306 291 aa17.17■□□□□ 0.34
HSPG2-214ENST00000635682 GNAQP50148 359 aa17.17■□□□□ 0.34
HSPG2-214ENST00000635682 ANTXR2P58335 489 aa17.17■□□□□ 0.34
HSPG2-214ENST00000635682 CDC37Q16543 378 aaPredicted RBP17.17■□□□□ 0.34
HSPG2-214ENST00000635682 NSMFQ6X4W1 530 aa17.17■□□□□ 0.34
HSPG2-214ENST00000635682 ZNF654Q8IZM8 581 aa17.17■□□□□ 0.34
HSPG2-214ENST00000635682 IGDCC4Q8TDY8 1250 aa17.17■□□□□ 0.34
HSPG2-214ENST00000635682 A1CFQ9NQ94 594 aaKnown RBP17.17■□□□□ 0.34
HSPG2-214ENST00000635682 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.16■□□□□ 0.34
HSPG2-214ENST00000635682 SOWAHBA6NEL2 793 aa17.16■□□□□ 0.34
HSPG2-214ENST00000635682 LIFRP42702 1097 aa17.16■□□□□ 0.34
HSPG2-214ENST00000635682 GRM4Q14833 912 aa17.16■□□□□ 0.34
HSPG2-214ENST00000635682 USH1GQ495M9 461 aa17.16■□□□□ 0.34
HSPG2-214ENST00000635682 GNASQ5JWF2 1037 aa17.16■□□□□ 0.34
HSPG2-214ENST00000635682 NOL8Q76FK4 1167 aaKnown RBP17.16■□□□□ 0.34
HSPG2-214ENST00000635682 ANKRD33Q7Z3H0 272 aa17.16■□□□□ 0.34
HSPG2-214ENST00000635682 ADGRF4Q8IZF3 695 aa17.16■□□□□ 0.34
HSPG2-214ENST00000635682 FAM133AQ8N9E0 248 aa17.16■□□□□ 0.34
HSPG2-214ENST00000635682 TOX2Q96NM4 488 aa17.16■□□□□ 0.34
HSPG2-214ENST00000635682 MPHOSPH6Q99547 160 aaKnown RBP17.16■□□□□ 0.34
HSPG2-214ENST00000635682 LZTS2Q9BRK4 669 aa17.16■□□□□ 0.34
HSPG2-214ENST00000635682 LRRC2Q9BYS8 371 aa17.16■□□□□ 0.34
HSPG2-214ENST00000635682 KATNBL1Q9H079 304 aa17.16■□□□□ 0.34
HSPG2-214ENST00000635682 SEMA6BQ9H3T3 888 aa17.16■□□□□ 0.34
HSPG2-214ENST00000635682 LY9Q9HBG7 655 aa17.16■□□□□ 0.34
HSPG2-214ENST00000635682 SPC25Q9HBM1 224 aa17.16■□□□□ 0.34
HSPG2-214ENST00000635682 PTPDC1A2A3K4 754 aa17.15■□□□□ 0.34
HSPG2-214ENST00000635682 PTGS1P23219 599 aa17.15■□□□□ 0.34
HSPG2-214ENST00000635682 GJA9P57773 515 aa17.15■□□□□ 0.34
HSPG2-214ENST00000635682 BEX3Q00994 111 aa17.15■□□□□ 0.34
HSPG2-214ENST00000635682 FPGSQ05932 587 aa17.15■□□□□ 0.34
HSPG2-214ENST00000635682 MUM1L1Q5H9M0 696 aa17.15■□□□□ 0.34
HSPG2-214ENST00000635682 FBXO11Q86XK2 927 aa17.15■□□□□ 0.34
HSPG2-214ENST00000635682 RASEFQ8IZ41 740 aa17.15■□□□□ 0.34
HSPG2-214ENST00000635682 PCSK9Q8NBP7 692 aaKnown RBP17.15■□□□□ 0.34
HSPG2-214ENST00000635682 RNPC3Q96LT9 517 aaKnown RBP17.15■□□□□ 0.34
HSPG2-214ENST00000635682 GLT1D1Q96MS3 346 aa17.15■□□□□ 0.34
HSPG2-214ENST00000635682 MAP3K14Q99558 947 aa17.15■□□□□ 0.34
HSPG2-214ENST00000635682 CDX2Q99626 313 aaPredicted RBP17.15■□□□□ 0.34
HSPG2-214ENST00000635682 UPF3AQ9H1J1 476 aaKnown RBP17.15■□□□□ 0.34
HSPG2-214ENST00000635682 SEC63Q9UGP8 760 aaKnown RBP17.15■□□□□ 0.34
HSPG2-214ENST00000635682 SNX14Q9Y5W7 946 aa17.15■□□□□ 0.34
HSPG2-214ENST00000635682 CTAGE5O15320 804 aa17.14■□□□□ 0.33
HSPG2-214ENST00000635682 CASTP20810 708 aaKnown RBP17.14■□□□□ 0.33
HSPG2-214ENST00000635682 CST5P28325 142 aaPredicted RBP17.14■□□□□ 0.33
HSPG2-214ENST00000635682 CDK7P50613 346 aa17.14■□□□□ 0.33
HSPG2-214ENST00000635682 TNFAIP2Q03169 654 aa17.14■□□□□ 0.33
HSPG2-214ENST00000635682 ADCK5Q3MIX3 580 aa17.14■□□□□ 0.33
HSPG2-214ENST00000635682 MICU3Q86XE3 530 aa17.14■□□□□ 0.33
HSPG2-214ENST00000635682 HOMER1Q86YM7 354 aa17.14■□□□□ 0.33
HSPG2-214ENST00000635682 PURBQ96QR8 312 aaKnown RBP17.14■□□□□ 0.33
HSPG2-214ENST00000635682 AMNQ9BXJ7 453 aa17.14■□□□□ 0.33
HSPG2-214ENST00000635682 TTYH1Q9H313 450 aaPredicted RBP17.14■□□□□ 0.33
HSPG2-214ENST00000635682 MAD2L2Q9UI95 211 aa17.14■□□□□ 0.33
HSPG2-214ENST00000635682 ELP1O95163 1332 aa17.14■□□□□ 0.33
HSPG2-214ENST00000635682 ABCB11O95342 1321 aa17.14■□□□□ 0.33
HSPG2-214ENST00000635682 B4DLN1 442 aa17.13■□□□□ 0.33
HSPG2-214ENST00000635682 TIMP1P01033 207 aa17.13■□□□□ 0.33
HSPG2-214ENST00000635682 MRPL12P52815 198 aaKnown RBP17.13■□□□□ 0.33
HSPG2-214ENST00000635682 SMAD3P84022 425 aaKnown RBP17.13■□□□□ 0.33
HSPG2-214ENST00000635682 EEPD1Q7L9B9 569 aa17.13■□□□□ 0.33
HSPG2-214ENST00000635682 MCF2L2Q86YR7 1114 aa17.13■□□□□ 0.33
HSPG2-214ENST00000635682 STAG2Q8N3U4 1231 aa17.13■□□□□ 0.33
HSPG2-214ENST00000635682 RRP36Q96EU6 259 aaKnown RBP17.13■□□□□ 0.33
HSPG2-214ENST00000635682 MYL10Q9BUA6 226 aa17.13■□□□□ 0.33
HSPG2-214ENST00000635682 USP26Q9BXU7 913 aa17.13■□□□□ 0.33
HSPG2-214ENST00000635682 CPVLQ9H3G5 476 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms