RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 AK8Q96MA6 479 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 ZNF830Q96NB3 372 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-230ENST00000634433 GSDMAQ96QA5 445 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 PIGSQ96S52 555 aa8.08□□□□□ -1.12
BRCA1-230ENST00000634433 MAP3K20Q9NYL2 800 aaKnown RBP8.08□□□□□ -1.12
BRCA1-230ENST00000634433 NRDCO43847 1150 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 NOLC1Q14978 699 aaKnown RBP eCLIP8.07□□□□□ -1.12
BRCA1-230ENST00000634433 AMHR2Q16671 573 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 CFAP100Q494V2 611 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 ISM2Q6H9L7 571 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 TYW1BQ6NUM6 668 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 TMEM179Q6ZVK1 233 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 LRRC47Q8N1G4 583 aaKnown RBP8.07□□□□□ -1.12
BRCA1-230ENST00000634433 PAGE5Q96GU1 130 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 RPS6KC1Q96S38 1066 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 FAM198AQ9UFP1 575 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 COL2A1P02458 1487 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-230ENST00000634433 A0A087WWV3 80 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 SBF1O95248 1867 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 MYL1P05976 194 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 PTGS1P23219 599 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 GTF2F1P35269 517 aaKnown RBP eCLIP8.07□□□□□ -1.124e-8■■■□□ 16.5
BRCA1-230ENST00000634433 MMP14P50281 582 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 ADCY7P51828 1080 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 TERF1P54274 439 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 ATP2B2Q01814 1243 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 TCP10Q12799 353 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 BMS1Q14692 1282 aaKnown RBP8.07□□□□□ -1.12
BRCA1-230ENST00000634433 NCAPHQ15003 741 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 INF2Q27J81 1249 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 TATDN1Q6P1N9 297 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 RSBN1LQ6PCB5 846 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-230ENST00000634433 USP49Q70CQ1 688 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 NEK8Q86SG6 692 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 REXO1Q8N1G1 1221 aaKnown RBP8.07□□□□□ -1.12
BRCA1-230ENST00000634433 OGFOD1Q8N543 542 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 ENOX1Q8TC92 643 aaKnown RBP8.07□□□□□ -1.12
BRCA1-230ENST00000634433 NAP1L4Q99733 375 aaKnown RBP8.07□□□□□ -1.12
BRCA1-230ENST00000634433 GPCPD1Q9NPB8 672 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 RMND1Q9NWS8 449 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 SYNPO2Q9UMS6 1093 aa8.07□□□□□ -1.12
BRCA1-230ENST00000634433 FRMPD2Q68DX3 1309 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-230ENST00000634433 STK10O94804 968 aaKnown RBP8.06□□□□□ -1.12
BRCA1-230ENST00000634433 VIL1P09327 827 aaKnown RBP8.06□□□□□ -1.12
BRCA1-230ENST00000634433 UBA7P41226 1012 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 MRPL12P52815 198 aaKnown RBP8.06□□□□□ -1.12
BRCA1-230ENST00000634433 EIF6P56537 245 aaKnown RBP8.06□□□□□ -1.12
BRCA1-230ENST00000634433 FANCCQ00597 558 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 MCTP2Q6DN12 878 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 ZNF467Q7Z7K2 595 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-230ENST00000634433 FMNL3Q8IVF7 1028 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 RASGRP4Q8TDF6 673 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 GTPBP4Q9BZE4 634 aaKnown RBP8.06□□□□□ -1.12
BRCA1-230ENST00000634433 CUEDC2Q9H467 287 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 MAGEF1Q9HAY2 307 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 SPTLC3Q9NUV7 552 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 DDTLA6NHG4 134 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-230ENST00000634433 WNT7AO00755 349 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 ZBTB5O15062 677 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 FOXN1O15353 648 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 SERPINC1P01008 464 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 SERPINB4P48594 390 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 ABCB5Q2M3G0 1257 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 RRAGBQ5VZM2 374 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 ZFPM1Q8IX07 1006 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 ADGRF4Q8IZF3 695 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 SDR16C5Q8N3Y7 309 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 TTC30BQ8N4P2 665 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 KIAA1524Q8TCG1 905 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 CCSER1Q9C0I3 900 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 RIC8AQ9NPQ8 531 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 IFNKQ9P0W0 207 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 HERC5Q9UII4 1024 aaKnown RBP8.06□□□□□ -1.12
BRCA1-230ENST00000634433 ATRNL1Q5VV63 1379 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 MYH8P13535 1937 aa8.06□□□□□ -1.12
BRCA1-230ENST00000634433 ANKRD33BA6NCL7 494 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 GOLGA6CA6NDK9 693 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 GOLGA6BA6NDN3 693 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 CCNT1O60563 726 aaKnown RBP8.05□□□□□ -1.12
BRCA1-230ENST00000634433 OR52Z1P0C646 297 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 PRR29P0C7W0 189 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 GOLGA6DP0CG33 693 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 STAT6P42226 847 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 AFMP43652 599 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 UBASH3AP57075 661 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 DPYDQ12882 1025 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 TRAF1Q13077 416 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 DLGAP5Q15398 846 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 LETM2Q2VYF4 491 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 DNTTIP2Q5QJE6 756 aaKnown RBP8.05□□□□□ -1.12
BRCA1-230ENST00000634433 SLFN13Q68D06 897 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 MTMR14Q8NCE2 650 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 CCDC150Q8NCX0 1101 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 RASSF8Q8NHQ8 419 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 CUL5Q93034 780 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 MTMR8Q96EF0 704 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 RAB34Q9BZG1 259 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 CPVLQ9H3G5 476 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 KCNF1Q9H3M0 494 aa8.05□□□□□ -1.12
BRCA1-230ENST00000634433 TDRD3Q9H7E2 651 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms