RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 KRT25Q7Z3Z0 450 aa16.26■□□□□ 0.19
PHACTR4-209ENST00000633371 BICD2Q8TD16 824 aa16.26■□□□□ 0.19
PHACTR4-209ENST00000633371 CRYGNQ8WXF5 182 aa16.26■□□□□ 0.19
PHACTR4-209ENST00000633371 GLT8D2Q9H1C3 349 aa16.26■□□□□ 0.19
PHACTR4-209ENST00000633371 ZCCHC17Q9NP64 241 aaKnown RBP16.26■□□□□ 0.19
PHACTR4-209ENST00000633371 MORF4L1Q9UBU8 362 aa16.26■□□□□ 0.19
PHACTR4-209ENST00000633371 PNMA2Q9UL42 364 aa16.26■□□□□ 0.19
PHACTR4-209ENST00000633371 CTDP1Q9Y5B0 961 aaPredicted RBP16.26■□□□□ 0.19
PHACTR4-209ENST00000633371 PCDHB6Q9Y5E3 794 aa16.26■□□□□ 0.19
PHACTR4-209ENST00000633371 PLXNA1Q9UIW2 1896 aa16.26■□□□□ 0.19
PHACTR4-209ENST00000633371 MGAMO43451 1857 aa16.25■□□□□ 0.19
PHACTR4-209ENST00000633371 GCOM1H8Y6P7 765 aaPredicted RBP16.25■□□□□ 0.19
PHACTR4-209ENST00000633371 CFBP00751 764 aa16.25■□□□□ 0.19
PHACTR4-209ENST00000633371 POLR2MP0CAP2 368 aa16.25■□□□□ 0.19
PHACTR4-209ENST00000633371 INHBEP58166 350 aa16.25■□□□□ 0.19
PHACTR4-209ENST00000633371 ERVK-9P63128 1117 aa16.25■□□□□ 0.19
PHACTR4-209ENST00000633371 ERVK-24P63145 666 aa16.25■□□□□ 0.19
PHACTR4-209ENST00000633371 GNL2Q13823 731 aaKnown RBP16.25■□□□□ 0.19
PHACTR4-209ENST00000633371 SLC30A10Q6XR72 485 aa16.25■□□□□ 0.19
PHACTR4-209ENST00000633371 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.25■□□□□ 0.19
PHACTR4-209ENST00000633371 SYTL5Q8TDW5 730 aaPredicted RBP16.25■□□□□ 0.19
PHACTR4-209ENST00000633371 PURBQ96QR8 312 aaKnown RBP16.25■□□□□ 0.19
PHACTR4-209ENST00000633371 ANO3Q9BYT9 981 aa16.25■□□□□ 0.19
PHACTR4-209ENST00000633371 RTEL1Q9NZ71 1219 aa16.25■□□□□ 0.19
PHACTR4-209ENST00000633371 RCOR1Q9UKL0 485 aa16.25■□□□□ 0.19
PHACTR4-209ENST00000633371 ATP6V1DQ9Y5K8 247 aa16.25■□□□□ 0.19
PHACTR4-209ENST00000633371 THSD7BQ9C0I4 1608 aa16.25■□□□□ 0.19
PHACTR4-209ENST00000633371 KIAA1217Q5T5P2 1943 aa16.25■□□□□ 0.19
PHACTR4-209ENST00000633371 MCM3APO60318 1980 aa16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 CCDC194A0A1B0GVG4 234 aa16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 BCRP11274 1271 aa16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 ATP2B1P20020 1258 aa16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 MCM4P33991 863 aa16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 NASPP49321 788 aaPredicted RBP16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 GRM1Q13255 1194 aa16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 BAATQ14032 418 aaPredicted RBP16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 NONOQ15233 471 aaKnown RBP eCLIP16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 ANO1Q5XXA6 986 aa16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 TEX2Q8IWB9 1127 aa16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 ANKRD13CQ8N6S4 541 aa16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 C4orf32Q8N8J7 132 aa16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 CHST13Q8NET6 341 aa16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 TBCKQ8TEA7 893 aa16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 GTF3C2Q8WUA4 911 aaPredicted RBP16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 LEO1Q8WVC0 666 aaPredicted RBP16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 PARK7Q99497 189 aaKnown RBP16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 PORCNQ9H237 461 aa16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 A1CFQ9NQ94 594 aaKnown RBP16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 ZSWIM8A7E2V4 1837 aa16.24■□□□□ 0.19
PHACTR4-209ENST00000633371 RPTORQ8N122 1335 aa16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 ERCC3P19447 782 aa16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 GCLCP48506 637 aaPredicted RBP16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 VEGFBP49765 207 aa16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 RPS6P62753 249 aaKnown RBP16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 KRT85P78386 507 aa16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 CEBPZQ03701 1054 aaKnown RBP16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 AP3B2Q13367 1082 aa16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 SF3A1Q15459 793 aaKnown RBP16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 ZNF174Q15697 407 aa16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 RILPL1Q5EBL4 403 aa16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 ATL3Q6DD88 541 aa16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 PAXIP1Q6ZW49 1069 aaPredicted RBP16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 FCHSD1Q86WN1 690 aa16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 SAMD3Q8N6K7 520 aa16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 TMEM87AQ8NBN3 555 aa16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 LINC00301Q8NCQ3 95 aa16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 ZNF396Q96N95 335 aaPredicted RBP16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 TAAR1Q96RJ0 339 aa16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 ACAD9Q9H845 621 aa16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 POLR3EQ9NVU0 708 aa16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 CYP39A1Q9NYL5 469 aa16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 MRVI1Q9Y6F6 885 aa16.23■□□□□ 0.19
PHACTR4-209ENST00000633371 FRMPD4Q14CM0 1322 aa16.22■□□□□ 0.19
PHACTR4-209ENST00000633371 FIBPO43427 364 aa16.22■□□□□ 0.19
PHACTR4-209ENST00000633371 FOSP01100 380 aaPredicted RBP16.22■□□□□ 0.19
PHACTR4-209ENST00000633371 SREBF1P36956 1147 aa16.22■□□□□ 0.19
PHACTR4-209ENST00000633371 TRAPPC10P48553 1259 aa16.22■□□□□ 0.19
PHACTR4-209ENST00000633371 SREBF2Q12772 1141 aa16.22■□□□□ 0.19
PHACTR4-209ENST00000633371 NOGQ13253 232 aa16.22■□□□□ 0.19
PHACTR4-209ENST00000633371 TAF1CQ15572 869 aaPredicted RBP16.22■□□□□ 0.19
PHACTR4-209ENST00000633371 TTC38Q5R3I4 469 aa16.22■□□□□ 0.19
PHACTR4-209ENST00000633371 C17orf99Q6UX52 265 aa16.22■□□□□ 0.19
PHACTR4-209ENST00000633371 NSMFQ6X4W1 530 aa16.22■□□□□ 0.19
PHACTR4-209ENST00000633371 MCF2L2Q86YR7 1114 aa16.22■□□□□ 0.19
PHACTR4-209ENST00000633371 SHCBP1Q8NEM2 672 aa16.22■□□□□ 0.19
PHACTR4-209ENST00000633371 GPRC5AQ8NFJ5 357 aa16.22■□□□□ 0.19
PHACTR4-209ENST00000633371 SMCR8Q8TEV9 937 aaPredicted RBP16.22■□□□□ 0.19
PHACTR4-209ENST00000633371 EFCC1Q9HA90 598 aa16.22■□□□□ 0.19
PHACTR4-209ENST00000633371 LMBRD1Q9NUN5 540 aa16.22■□□□□ 0.19
PHACTR4-209ENST00000633371 CPA4Q9UI42 421 aa16.22■□□□□ 0.19
PHACTR4-209ENST00000633371 LRRC37A2A6NM11 1700 aa16.22■□□□□ 0.19
PHACTR4-209ENST00000633371 ASTN1O14525 1302 aa16.21■□□□□ 0.19
PHACTR4-209ENST00000633371 GADD45BO75293 160 aaPredicted RBP16.21■□□□□ 0.19
PHACTR4-209ENST00000633371 SLC25A27O95847 323 aa16.21■□□□□ 0.19
PHACTR4-209ENST00000633371 NCLP19338 710 aaKnown RBP16.21■□□□□ 0.19
PHACTR4-209ENST00000633371 SLC39A14Q15043 492 aa16.21■□□□□ 0.19
PHACTR4-209ENST00000633371 NFKBIBQ15653 356 aa16.21■□□□□ 0.19
PHACTR4-209ENST00000633371 RNF207Q6ZRF8 634 aa16.21■□□□□ 0.19
PHACTR4-209ENST00000633371 NEK8Q86SG6 692 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms