RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 MTCH2Q9Y6C9 303 aa23.9■■□□□ 1.42
TARDBP-228ENST00000629725 TNKSO95271 1327 aa23.89■■□□□ 1.42
TARDBP-228ENST00000629725 RFXAPO00287 272 aa23.89■■□□□ 1.41
TARDBP-228ENST00000629725 SNAP25P60880 206 aa23.89■■□□□ 1.41
TARDBP-228ENST00000629725 DUSP28Q4G0W2 176 aa23.89■■□□□ 1.41
TARDBP-228ENST00000629725 NSMFQ6X4W1 530 aa23.89■■□□□ 1.41
TARDBP-228ENST00000629725 GPATCH3Q96I76 525 aa23.89■■□□□ 1.41
TARDBP-228ENST00000629725 CERS4Q9HA82 394 aa23.89■■□□□ 1.41
TARDBP-228ENST00000629725 POLR3EQ9NVU0 708 aa23.89■■□□□ 1.41
TARDBP-228ENST00000629725 ACTN1P12814 892 aa23.88■■□□□ 1.41
TARDBP-228ENST00000629725 PPP4R3BQ5MIZ7 849 aa23.88■■□□□ 1.41
TARDBP-228ENST00000629725 RCSD1Q6JBY9 416 aa23.88■■□□□ 1.41
TARDBP-228ENST00000629725 MORC4Q8TE76 937 aa23.88■■□□□ 1.41
TARDBP-228ENST00000629725 PURBQ96QR8 312 aaKnown RBP23.88■■□□□ 1.41
TARDBP-228ENST00000629725 CCPG1Q9ULG6 757 aa23.88■■□□□ 1.41
TARDBP-228ENST00000629725 PRR12Q9ULL5 1215 aa23.88■■□□□ 1.41
TARDBP-228ENST00000629725 STX8Q9UNK0 236 aa23.88■■□□□ 1.41
TARDBP-228ENST00000629725 CPT1AP50416 773 aa23.87■■□□□ 1.41
TARDBP-228ENST00000629725 PURAQ00577 322 aaKnown RBP23.87■■□□□ 1.41
TARDBP-228ENST00000629725 LRRFIP1Q32MZ4 808 aaKnown RBP23.87■■□□□ 1.41
TARDBP-228ENST00000629725 TSHZ3Q63HK5 1081 aa23.87■■□□□ 1.41
TARDBP-228ENST00000629725 SLC9A7Q96T83 725 aa23.87■■□□□ 1.41
TARDBP-228ENST00000629725 WDR11Q9BZH6 1224 aa23.87■■□□□ 1.41
TARDBP-228ENST00000629725 COG5Q9UP83 839 aa23.87■■□□□ 1.41
TARDBP-228ENST00000629725 PPARAQ07869 468 aa23.86■■□□□ 1.41
TARDBP-228ENST00000629725 PHOSPHO2Q8TCD6 241 aa23.86■■□□□ 1.41
TARDBP-228ENST00000629725 NAPBQ9H115 298 aa23.86■■□□□ 1.41
TARDBP-228ENST00000629725 GPHNQ9NQX3 736 aaPredicted RBP23.86■■□□□ 1.41
TARDBP-228ENST00000629725 ADD3Q9UEY8 706 aaKnown RBP23.86■■□□□ 1.41
TARDBP-228ENST00000629725 ICAM1P05362 532 aa23.85■■□□□ 1.41
TARDBP-228ENST00000629725 MYL3P08590 195 aa23.85■■□□□ 1.41
TARDBP-228ENST00000629725 RFC2P35250 354 aa23.85■■□□□ 1.41
TARDBP-228ENST00000629725 MTG1Q9BT17 334 aaPredicted RBP23.85■■□□□ 1.41
TARDBP-228ENST00000629725 TANC1Q9C0D5 1861 aa23.85■■□□□ 1.41
TARDBP-228ENST00000629725 SCN10AQ9Y5Y9 1956 aa23.85■■□□□ 1.41
TARDBP-228ENST00000629725 EPOPA6NHQ4 379 aa23.84■■□□□ 1.41
TARDBP-228ENST00000629725 TSPY2A6NKD2 308 aa23.84■■□□□ 1.41
TARDBP-228ENST00000629725 ALDH5A1P51649 535 aaPredicted RBP23.84■■□□□ 1.41
TARDBP-228ENST00000629725 BAATQ14032 418 aaPredicted RBP23.84■■□□□ 1.41
TARDBP-228ENST00000629725 FAM47CQ5HY64 1035 aa23.84■■□□□ 1.41
TARDBP-228ENST00000629725 KRT40Q6A162 431 aa23.84■■□□□ 1.41
TARDBP-228ENST00000629725 ARNTL2Q8WYA1 636 aa23.84■■□□□ 1.41
TARDBP-228ENST00000629725 SEC62Q99442 399 aaKnown RBP23.84■■□□□ 1.41
TARDBP-228ENST00000629725 KIF28PB7ZC32 967 aa23.83■■□□□ 1.41
TARDBP-228ENST00000629725 BRDTQ58F21 947 aaPredicted RBP23.83■■□□□ 1.41
TARDBP-228ENST00000629725 RASGRP2Q7LDG7 609 aa23.83■■□□□ 1.41
TARDBP-228ENST00000629725 OR6J1Q8NGC5 347 aa23.83■■□□□ 1.41
TARDBP-228ENST00000629725 EPHX3Q9H6B9 360 aa23.83■■□□□ 1.41
TARDBP-228ENST00000629725 IL17RBQ9NRM6 502 aa23.83■■□□□ 1.41
TARDBP-228ENST00000629725 MTMR7Q9Y216 660 aa23.83■■□□□ 1.41
TARDBP-228ENST00000629725 LOC102724159A0A0B4J2E5 919 aa23.82■■□□□ 1.4
TARDBP-228ENST00000629725 PITPNM1O00562 1244 aa23.82■■□□□ 1.4
TARDBP-228ENST00000629725 IQCF3P0C7M6 154 aa23.82■■□□□ 1.4
TARDBP-228ENST00000629725 HOXD11P31277 338 aaPredicted RBP23.82■■□□□ 1.4
TARDBP-228ENST00000629725 TAP1Q03518 808 aa23.82■■□□□ 1.4
TARDBP-228ENST00000629725 PWP2Q15269 919 aaKnown RBP23.82■■□□□ 1.4
TARDBP-228ENST00000629725 NBPF20Q3BBV1 942 aa23.82■■□□□ 1.4
TARDBP-228ENST00000629725 RETREG2Q8NC44 543 aa23.82■■□□□ 1.4
TARDBP-228ENST00000629725 HLA-CQ95604 372 aa23.82■■□□□ 1.4
TARDBP-228ENST00000629725 LRFN3Q9BTN0 628 aa23.82■■□□□ 1.4
TARDBP-228ENST00000629725 FTOQ9C0B1 505 aaKnown RBP eCLIP23.82■■□□□ 1.4
TARDBP-228ENST00000629725 RANBP17Q9H2T7 1088 aaKnown RBP23.82■■□□□ 1.4
TARDBP-228ENST00000629725 HCN4Q9Y3Q4 1203 aa23.82■■□□□ 1.4
TARDBP-228ENST00000629725 ARIH1Q9Y4X5 557 aaPredicted RBP23.82■■□□□ 1.4
TARDBP-228ENST00000629725 RBM47A0AV96 593 aaKnown RBP23.81■■□□□ 1.4
TARDBP-228ENST00000629725 TLL1O43897 1013 aa23.81■■□□□ 1.4
TARDBP-228ENST00000629725 NMT2O60551 498 aa23.81■■□□□ 1.4
TARDBP-228ENST00000629725 CCDC96Q2M329 555 aa23.81■■□□□ 1.4
TARDBP-228ENST00000629725 NFRKBQ6P4R8 1299 aa23.81■■□□□ 1.4
TARDBP-228ENST00000629725 HERC6Q8IVU3 1022 aa23.81■■□□□ 1.4
TARDBP-228ENST00000629725 TET1Q8NFU7 2136 aa23.81■■□□□ 1.4
TARDBP-228ENST00000629725 RAD50Q92878 1312 aa23.81■■□□□ 1.4
TARDBP-228ENST00000629725 TRIP12Q14669 1992 aaPredicted RBP23.8■■□□□ 1.4
TARDBP-228ENST00000629725 PTPDC1A2A3K4 754 aa23.8■■□□□ 1.4
TARDBP-228ENST00000629725 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.8■■□□□ 1.4
TARDBP-228ENST00000629725 NFIBO00712 420 aa23.79■■□□□ 1.4
TARDBP-228ENST00000629725 NKRFO15226 690 aaKnown RBP eCLIP23.79■■□□□ 1.4
TARDBP-228ENST00000629725 ARHGEF15O94989 841 aa23.79■■□□□ 1.4
TARDBP-228ENST00000629725 BFSP2Q13515 415 aa23.79■■□□□ 1.4
TARDBP-228ENST00000629725 PPP2R5BQ15173 497 aa23.79■■□□□ 1.4
TARDBP-228ENST00000629725 PPP1R13LQ8WUF5 828 aa23.79■■□□□ 1.4
TARDBP-228ENST00000629725 DCAF4Q8WV16 495 aa23.79■■□□□ 1.4
TARDBP-228ENST00000629725 INCENPQ9NQS7 918 aa23.79■■□□□ 1.4
TARDBP-228ENST00000629725 PTPRSQ13332 1948 aa23.78■■□□□ 1.4
TARDBP-228ENST00000629725 KPNA6O60684 536 aa23.78■■□□□ 1.4
TARDBP-228ENST00000629725 BAIAP3O94812 1187 aa23.78■■□□□ 1.4
TARDBP-228ENST00000629725 SLC16A2P36021 539 aa23.78■■□□□ 1.4
TARDBP-228ENST00000629725 CTDSPL2Q05D32 466 aa23.78■■□□□ 1.4
TARDBP-228ENST00000629725 PTPN11Q06124 597 aaPredicted RBP23.78■■□□□ 1.4
TARDBP-228ENST00000629725 GRB10Q13322 594 aa23.78■■□□□ 1.4
TARDBP-228ENST00000629725 TMEM31Q5JXX7 168 aa23.78■■□□□ 1.4
TARDBP-228ENST00000629725 TTBK2Q6IQ55 1244 aa23.78■■□□□ 1.4
TARDBP-228ENST00000629725 NOD1Q9Y239 953 aa23.78■■□□□ 1.4
TARDBP-228ENST00000629725 COL4A4P53420 1690 aaPredicted RBP23.78■■□□□ 1.4
TARDBP-228ENST00000629725 RANBP6O60518 1105 aaKnown RBP23.77■■□□□ 1.4
TARDBP-228ENST00000629725 CALML3P27482 149 aa23.77■■□□□ 1.4
TARDBP-228ENST00000629725 ZMYM1Q5SVZ6 1142 aa23.77■■□□□ 1.4
TARDBP-228ENST00000629725 BTNL9Q6UXG8 535 aa23.77■■□□□ 1.4
TARDBP-228ENST00000629725 MPHOSPH6Q99547 160 aaKnown RBP23.77■■□□□ 1.4
TARDBP-228ENST00000629725 FSD1Q9BTV5 496 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms