RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 PCDHA4Q9UN74 947 aa13.25□□□□□ -0.29
PTPN7-219ENST00000629151 SPDYE3A6NKU9 549 aa13.24□□□□□ -0.29
PTPN7-219ENST00000629151 H3BQV1 296 aa13.24□□□□□ -0.29
PTPN7-219ENST00000629151 POTEB2H3BUK9 544 aa13.24□□□□□ -0.29
PTPN7-219ENST00000629151 NFIBO00712 420 aa13.24□□□□□ -0.29
PTPN7-219ENST00000629151 CFBP00751 764 aa13.24□□□□□ -0.29
PTPN7-219ENST00000629151 XRCC5P13010 732 aaKnown RBP13.24□□□□□ -0.29
PTPN7-219ENST00000629151 RGS2P41220 211 aa13.24□□□□□ -0.29
PTPN7-219ENST00000629151 BAATQ14032 418 aaPredicted RBP13.24□□□□□ -0.29
PTPN7-219ENST00000629151 GRB14Q14449 540 aa13.24□□□□□ -0.29
PTPN7-219ENST00000629151 MUM1L1Q5H9M0 696 aa13.24□□□□□ -0.29
PTPN7-219ENST00000629151 IFFO2Q5TF58 517 aa13.24□□□□□ -0.29
PTPN7-219ENST00000629151 DPP9Q86TI2 863 aa13.24□□□□□ -0.29
PTPN7-219ENST00000629151 MSL3Q8N5Y2 521 aaKnown RBP13.24□□□□□ -0.29
PTPN7-219ENST00000629151 DNERQ8NFT8 737 aa13.24□□□□□ -0.29
PTPN7-219ENST00000629151 PHF20Q9BVI0 1012 aa13.24□□□□□ -0.29
PTPN7-219ENST00000629151 A1CFQ9NQ94 594 aaKnown RBP13.24□□□□□ -0.29
PTPN7-219ENST00000629151 VPS54Q9P1Q0 977 aa13.24□□□□□ -0.29
PTPN7-219ENST00000629151 DNAJC25-GNG10A0A024R161 153 aa13.23□□□□□ -0.29
PTPN7-219ENST00000629151 PPFIA3O75145 1194 aa13.23□□□□□ -0.29
PTPN7-219ENST00000629151 MMP1P03956 469 aa13.23□□□□□ -0.29
PTPN7-219ENST00000629151 HOXC6P09630 235 aa13.23□□□□□ -0.29
PTPN7-219ENST00000629151 HSPA1AP0DMV8 641 aaKnown RBP13.23□□□□□ -0.29
PTPN7-219ENST00000629151 HSPA1BP0DMV9 641 aaKnown RBP13.23□□□□□ -0.29
PTPN7-219ENST00000629151 RPS6P62753 249 aaKnown RBP13.23□□□□□ -0.29
PTPN7-219ENST00000629151 MAP2K5Q13163 448 aa13.23□□□□□ -0.29
PTPN7-219ENST00000629151 MORN1Q5T089 497 aa13.23□□□□□ -0.29
PTPN7-219ENST00000629151 KRT40Q6A162 431 aa13.23□□□□□ -0.29
PTPN7-219ENST00000629151 XRRA1Q6P2D8 792 aa13.23□□□□□ -0.29
PTPN7-219ENST00000629151 ZNF467Q7Z7K2 595 aaPredicted RBP13.23□□□□□ -0.29
PTPN7-219ENST00000629151 BLIDQ8IZY5 108 aa13.23□□□□□ -0.29
PTPN7-219ENST00000629151 REXO1Q8N1G1 1221 aaKnown RBP13.23□□□□□ -0.29
PTPN7-219ENST00000629151 SYTL5Q8TDW5 730 aaPredicted RBP13.23□□□□□ -0.29
PTPN7-219ENST00000629151 NSUN6Q8TEA1 469 aaKnown RBP13.23□□□□□ -0.29
PTPN7-219ENST00000629151 ASB14A6NK59 587 aa13.22□□□□□ -0.29
PTPN7-219ENST00000629151 MEIS2O14770 477 aa13.22□□□□□ -0.29
PTPN7-219ENST00000629151 OPLAHO14841 1288 aa13.22□□□□□ -0.29
PTPN7-219ENST00000629151 PEX10O60683 326 aa13.22□□□□□ -0.29
PTPN7-219ENST00000629151 ADORA2AP29274 412 aa13.22□□□□□ -0.29
PTPN7-219ENST00000629151 KRT2P35908 639 aa13.22□□□□□ -0.29
PTPN7-219ENST00000629151 IRF5Q13568 498 aa13.22□□□□□ -0.29
PTPN7-219ENST00000629151 TYW1BQ6NUM6 668 aa13.22□□□□□ -0.29
PTPN7-219ENST00000629151 KRT25Q7Z3Z0 450 aa13.22□□□□□ -0.29
PTPN7-219ENST00000629151 FAM133AQ8N9E0 248 aa13.22□□□□□ -0.29
PTPN7-219ENST00000629151 TRIM47Q96LD4 638 aa13.22□□□□□ -0.29
PTPN7-219ENST00000629151 AIFM3Q96NN9 605 aa13.22□□□□□ -0.29
PTPN7-219ENST00000629151 IWS1Q96ST2 819 aa13.22□□□□□ -0.29
PTPN7-219ENST00000629151 FOXP1Q9H334 677 aaPredicted RBP13.22□□□□□ -0.29
PTPN7-219ENST00000629151 SRRDQ9UH36 339 aa13.22□□□□□ -0.29
PTPN7-219ENST00000629151 GJD2Q9UKL4 321 aa13.22□□□□□ -0.29
PTPN7-219ENST00000629151 A0A0G2JMZ2 1700 aa13.22□□□□□ -0.29
PTPN7-219ENST00000629151 RLFQ13129 1914 aa13.21□□□□□ -0.29
PTPN7-219ENST00000629151 FOXN1O15353 648 aa13.21□□□□□ -0.29
PTPN7-219ENST00000629151 HSPA8P11142 646 aaKnown RBP13.21□□□□□ -0.29
PTPN7-219ENST00000629151 PKN2Q16513 984 aaKnown RBP13.21□□□□□ -0.29
PTPN7-219ENST00000629151 ZNF792Q3KQV3 632 aa13.21□□□□□ -0.29
PTPN7-219ENST00000629151 CD99L2Q8TCZ2 262 aa13.21□□□□□ -0.29
PTPN7-219ENST00000629151 USP6NLQ92738 828 aa13.21□□□□□ -0.29
PTPN7-219ENST00000629151 RMDN3Q96TC7 470 aa13.21□□□□□ -0.29
PTPN7-219ENST00000629151 NAP1L4Q99733 375 aaKnown RBP13.21□□□□□ -0.29
PTPN7-219ENST00000629151 APBA2Q99767 749 aa13.21□□□□□ -0.29
PTPN7-219ENST00000629151 STAM2O75886 525 aa13.2□□□□□ -0.3
PTPN7-219ENST00000629151 SYT1P21579 422 aa13.2□□□□□ -0.3
PTPN7-219ENST00000629151 CLK2P49760 499 aaKnown RBP13.2□□□□□ -0.3
PTPN7-219ENST00000629151 GNL2Q13823 731 aaKnown RBP13.2□□□□□ -0.3
PTPN7-219ENST00000629151 ARHGEF16Q5VV41 709 aa13.2□□□□□ -0.3
PTPN7-219ENST00000629151 OLFML2BQ68BL8 750 aa13.2□□□□□ -0.3
PTPN7-219ENST00000629151 USP17L6PQ6QN14 398 aa13.2□□□□□ -0.3
PTPN7-219ENST00000629151 MAMDC4Q6UXC1 1216 aa13.2□□□□□ -0.3
PTPN7-219ENST00000629151 FCHSD1Q86WN1 690 aa13.2□□□□□ -0.3
PTPN7-219ENST00000629151 DIS3L2Q8IYB7 885 aaKnown RBP13.2□□□□□ -0.3
PTPN7-219ENST00000629151 PXYLP1Q8TE99 480 aa13.2□□□□□ -0.3
PTPN7-219ENST00000629151 TBC1D5Q92609 795 aa13.2□□□□□ -0.3
PTPN7-219ENST00000629151 IPO9Q96P70 1041 aaKnown RBP13.2□□□□□ -0.3
PTPN7-219ENST00000629151 PRDM10Q9NQV6 1147 aa13.2□□□□□ -0.3
PTPN7-219ENST00000629151 PCDHA6Q9UN73 950 aa13.2□□□□□ -0.3
PTPN7-219ENST00000629151 KCNJ14Q9UNX9 436 aa13.2□□□□□ -0.3
PTPN7-219ENST00000629151 PCDHA8Q9Y5H6 950 aa13.2□□□□□ -0.3
PTPN7-219ENST00000629151 CCDC194A0A1B0GVG4 234 aa13.19□□□□□ -0.3
PTPN7-219ENST00000629151 M0R2N6 131 aa13.19□□□□□ -0.3
PTPN7-219ENST00000629151 STX6O43752 255 aa13.19□□□□□ -0.3
PTPN7-219ENST00000629151 COBLO75128 1261 aa13.19□□□□□ -0.3
PTPN7-219ENST00000629151 U2AF2P26368 475 aaKnown RBP eCLIP13.19□□□□□ -0.3
PTPN7-219ENST00000629151 HOXA13P31271 388 aaPredicted RBP13.19□□□□□ -0.3
PTPN7-219ENST00000629151 FLT3LGP49771 235 aa13.19□□□□□ -0.3
PTPN7-219ENST00000629151 USP11P51784 963 aa13.19□□□□□ -0.3
PTPN7-219ENST00000629151 NONOQ15233 471 aaKnown RBP eCLIP13.19□□□□□ -0.3
PTPN7-219ENST00000629151 SLC30A10Q6XR72 485 aa13.19□□□□□ -0.3
PTPN7-219ENST00000629151 ANO3Q9BYT9 981 aa13.19□□□□□ -0.3
PTPN7-219ENST00000629151 ZSCAN16Q9H4T2 348 aaPredicted RBP13.19□□□□□ -0.3
PTPN7-219ENST00000629151 FOXD4L1Q9NU39 408 aa13.19□□□□□ -0.3
PTPN7-219ENST00000629151 BIN2Q9UBW5 565 aaPredicted RBP13.19□□□□□ -0.3
PTPN7-219ENST00000629151 NRBP1Q9UHY1 535 aa13.19□□□□□ -0.3
PTPN7-219ENST00000629151 TSKSQ9UJT2 592 aa13.19□□□□□ -0.3
PTPN7-219ENST00000629151 SYNGAP1Q96PV0 1343 aa13.18□□□□□ -0.3
PTPN7-219ENST00000629151 BTBD18B2RXH4 712 aa13.18□□□□□ -0.3
PTPN7-219ENST00000629151 CTGFP29279 349 aa13.18□□□□□ -0.3
PTPN7-219ENST00000629151 SREBF1P36956 1147 aa13.18□□□□□ -0.3
PTPN7-219ENST00000629151 TRAPPC10P48553 1259 aa13.18□□□□□ -0.3
PTPN7-219ENST00000629151 LBX1P52954 281 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms