RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 SLC5A4Q9NY91 659 aa12.93□□□□□ -0.34
DDX41-219ENST00000629036 ZMYND8Q9ULU4 1186 aaPredicted RBP12.93□□□□□ -0.34
DDX41-219ENST00000629036 ABCB11O95342 1321 aa12.92□□□□□ -0.34
DDX41-219ENST00000629036 CNTNAP5Q8WYK1 1306 aa12.92□□□□□ -0.34
DDX41-219ENST00000629036 POTEB2H3BUK9 544 aa12.92□□□□□ -0.34
DDX41-219ENST00000629036 ZBTB5O15062 677 aa12.92□□□□□ -0.34
DDX41-219ENST00000629036 CAPN2P17655 700 aa12.92□□□□□ -0.34
DDX41-219ENST00000629036 RPS6KB1P23443 525 aa12.92□□□□□ -0.34
DDX41-219ENST00000629036 RPS6P62753 249 aaKnown RBP12.92□□□□□ -0.34
DDX41-219ENST00000629036 C8orf34Q49A92 452 aa12.92□□□□□ -0.34
DDX41-219ENST00000629036 TMTC3Q6ZXV5 915 aa12.92□□□□□ -0.34
DDX41-219ENST00000629036 CCDC144CPQ8IYA2 1237 aa12.92□□□□□ -0.34
DDX41-219ENST00000629036 ANKLE1Q8NAG6 615 aa12.92□□□□□ -0.34
DDX41-219ENST00000629036 RGS22Q8NE09 1264 aa12.92□□□□□ -0.34
DDX41-219ENST00000629036 DDX11Q96FC9 970 aa12.92□□□□□ -0.34
DDX41-219ENST00000629036 JAKMIP1Q96N16 626 aaKnown RBP12.92□□□□□ -0.34
DDX41-219ENST00000629036 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.92□□□□□ -0.34
DDX41-219ENST00000629036 PNMA2Q9UL42 364 aa12.92□□□□□ -0.34
DDX41-219ENST00000629036 SCN10AQ9Y5Y9 1956 aa12.92□□□□□ -0.34
DDX41-219ENST00000629036 CTAGE5O15320 804 aa12.91□□□□□ -0.34
DDX41-219ENST00000629036 SMARCA1P28370 1054 aa12.91□□□□□ -0.34
DDX41-219ENST00000629036 ALDH5A1P51649 535 aaPredicted RBP12.91□□□□□ -0.34
DDX41-219ENST00000629036 HSD17B4P51659 736 aa12.91□□□□□ -0.34
DDX41-219ENST00000629036 EVCP57679 992 aa12.91□□□□□ -0.34
DDX41-219ENST00000629036 NSMFQ6X4W1 530 aa12.91□□□□□ -0.34
DDX41-219ENST00000629036 FBXO11Q86XK2 927 aa12.91□□□□□ -0.34
DDX41-219ENST00000629036 CMTR1Q8N1G2 835 aaKnown RBP12.91□□□□□ -0.34
DDX41-219ENST00000629036 TMTC2Q8N394 836 aa12.91□□□□□ -0.34
DDX41-219ENST00000629036 PAWRQ96IZ0 340 aaKnown RBP12.91□□□□□ -0.34
DDX41-219ENST00000629036 GDF15Q99988 308 aa12.91□□□□□ -0.34
DDX41-219ENST00000629036 MAF1Q9H063 256 aa12.91□□□□□ -0.34
DDX41-219ENST00000629036 ZSWIM6Q9HCJ5 1215 aa12.91□□□□□ -0.34
DDX41-219ENST00000629036 VAT1LQ9HCJ6 419 aa12.91□□□□□ -0.34
DDX41-219ENST00000629036 FRMPD4Q14CM0 1322 aa12.9□□□□□ -0.34
DDX41-219ENST00000629036 PRUNE2Q8WUY3 3088 aa12.9□□□□□ -0.34
DDX41-219ENST00000629036 CCDC69A6NI79 296 aa12.9□□□□□ -0.34
DDX41-219ENST00000629036 MSCO60682 206 aa12.9□□□□□ -0.34
DDX41-219ENST00000629036 ADAMTS4O75173 837 aa12.9□□□□□ -0.34
DDX41-219ENST00000629036 HMGB1P09429 215 aaKnown RBP12.9□□□□□ -0.34
DDX41-219ENST00000629036 SYN1P17600 705 aa12.9□□□□□ -0.34
DDX41-219ENST00000629036 PTGS1P23219 599 aa12.9□□□□□ -0.34
DDX41-219ENST00000629036 CDC27P30260 824 aa12.9□□□□□ -0.34
DDX41-219ENST00000629036 RCAN1P53805 252 aa12.9□□□□□ -0.34
DDX41-219ENST00000629036 TOB2Q14106 344 aaPredicted RBP12.9□□□□□ -0.34
DDX41-219ENST00000629036 TMEM63BQ5T3F8 832 aa12.9□□□□□ -0.34
DDX41-219ENST00000629036 ANO1Q5XXA6 986 aa12.9□□□□□ -0.34
DDX41-219ENST00000629036 GPR153Q6NV75 609 aa12.9□□□□□ -0.34
DDX41-219ENST00000629036 TAPT1Q6NXT6 567 aa12.9□□□□□ -0.34
DDX41-219ENST00000629036 RNF207Q6ZRF8 634 aa12.9□□□□□ -0.34
DDX41-219ENST00000629036 MICU3Q86XE3 530 aa12.9□□□□□ -0.34
DDX41-219ENST00000629036 FANCBQ8NB91 859 aa12.9□□□□□ -0.34
DDX41-219ENST00000629036 SYTL5Q8TDW5 730 aaPredicted RBP12.9□□□□□ -0.34
DDX41-219ENST00000629036 NUP133Q8WUM0 1156 aa12.9□□□□□ -0.34
DDX41-219ENST00000629036 TM6SF1Q9BZW5 370 aa12.9□□□□□ -0.34
DDX41-219ENST00000629036 LOC102724159A0A0B4J2E5 919 aa12.89□□□□□ -0.35
DDX41-219ENST00000629036 PNMA6FA0A0J9YX94 578 aa12.89□□□□□ -0.35
DDX41-219ENST00000629036 CASTP20810 708 aaKnown RBP12.89□□□□□ -0.35
DDX41-219ENST00000629036 KIF5BP33176 963 aa12.89□□□□□ -0.35
DDX41-219ENST00000629036 NKX3-2P78367 333 aa12.89□□□□□ -0.35
DDX41-219ENST00000629036 IRX5P78411 483 aaPredicted RBP12.89□□□□□ -0.35
DDX41-219ENST00000629036 APOBRQ0VD83 1088 aa12.89□□□□□ -0.35
DDX41-219ENST00000629036 ACVR2BQ13705 512 aa12.89□□□□□ -0.35
DDX41-219ENST00000629036 PWP2Q15269 919 aaKnown RBP12.89□□□□□ -0.35
DDX41-219ENST00000629036 CCSAPQ6IQ19 270 aaPredicted RBP12.89□□□□□ -0.35
DDX41-219ENST00000629036 BLOC1S2Q6QNY1 142 aa12.89□□□□□ -0.35
DDX41-219ENST00000629036 Q6ZUG5 572 aa12.89□□□□□ -0.35
DDX41-219ENST00000629036 HOMER1Q86YM7 354 aa12.89□□□□□ -0.35
DDX41-219ENST00000629036 CTCFLQ8NI51 663 aaPredicted RBP12.89□□□□□ -0.35
DDX41-219ENST00000629036 AMNQ9BXJ7 453 aa12.89□□□□□ -0.35
DDX41-219ENST00000629036 UPF3AQ9H1J1 476 aaKnown RBP12.89□□□□□ -0.35
DDX41-219ENST00000629036 ABHD16BQ9H3Z7 469 aa12.89□□□□□ -0.35
DDX41-219ENST00000629036 SLC12A7Q9Y666 1083 aa12.89□□□□□ -0.35
DDX41-219ENST00000629036 WDR81Q562E7 1941 aa12.89□□□□□ -0.35
DDX41-219ENST00000629036 SYNRGQ9UMZ2 1314 aa12.88□□□□□ -0.35
DDX41-219ENST00000629036 KLF18A0A0U1RQI7 1052 aa12.88□□□□□ -0.35
DDX41-219ENST00000629036 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.88□□□□□ -0.35
DDX41-219ENST00000629036 RBM47A0AV96 593 aaKnown RBP12.88□□□□□ -0.35
DDX41-219ENST00000629036 PTPDC1A2A3K4 754 aa12.88□□□□□ -0.35
DDX41-219ENST00000629036 MYADML2A6NDP7 307 aa12.88□□□□□ -0.35
DDX41-219ENST00000629036 CALM1P0DP23 149 aa12.88□□□□□ -0.35
DDX41-219ENST00000629036 CALM2P0DP24 149 aa12.88□□□□□ -0.35
DDX41-219ENST00000629036 CALM3P0DP25 149 aa12.88□□□□□ -0.35
DDX41-219ENST00000629036 AKR1A1P14550 325 aa12.88□□□□□ -0.35
DDX41-219ENST00000629036 CALML3P27482 149 aa12.88□□□□□ -0.35
DDX41-219ENST00000629036 BMP8BP34820 402 aa12.88□□□□□ -0.35
DDX41-219ENST00000629036 LRRC41Q15345 812 aa12.88□□□□□ -0.35
DDX41-219ENST00000629036 CCDC144BQ3MJ40 725 aa12.88□□□□□ -0.35
DDX41-219ENST00000629036 TYW1BQ6NUM6 668 aa12.88□□□□□ -0.35
DDX41-219ENST00000629036 NFXL1Q6ZNB6 911 aa12.88□□□□□ -0.35
DDX41-219ENST00000629036 RUFY3Q7L099 469 aa12.88□□□□□ -0.35
DDX41-219ENST00000629036 FBXO16Q8IX29 292 aaPredicted RBP12.88□□□□□ -0.35
DDX41-219ENST00000629036 KLHDC9Q8NEP7 349 aa12.88□□□□□ -0.35
DDX41-219ENST00000629036 DNERQ8NFT8 737 aa12.88□□□□□ -0.35
DDX41-219ENST00000629036 BRF1Q92994 677 aa12.88□□□□□ -0.35
DDX41-219ENST00000629036 LZTS2Q9BRK4 669 aa12.88□□□□□ -0.35
DDX41-219ENST00000629036 PDGFCQ9NRA1 345 aa12.88□□□□□ -0.35
DDX41-219ENST00000629036 GNEQ9Y223 722 aaKnown RBP12.88□□□□□ -0.35
DDX41-219ENST00000629036 MRPL11Q9Y3B7 192 aaKnown RBP12.88□□□□□ -0.35
DDX41-219ENST00000629036 PCDHA1Q9Y5I3 950 aa12.88□□□□□ -0.35
DDX41-219ENST00000629036 hCG_1642624A0A1W2PR95 340 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms