RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 CLEC4DQ8WXI8 215 aa9.3□□□□□ -0.92
CHD2-213ENST00000628118 ABHD8Q96I13 439 aa9.3□□□□□ -0.92
CHD2-213ENST00000628118 ZNF333Q96JL9 665 aa9.3□□□□□ -0.92
CHD2-213ENST00000628118 PIGSQ96S52 555 aa9.3□□□□□ -0.92
CHD2-213ENST00000628118 BACH2Q9BYV9 841 aa9.3□□□□□ -0.92
CHD2-213ENST00000628118 A1CFQ9NQ94 594 aaKnown RBP9.3□□□□□ -0.92
CHD2-213ENST00000628118 ADD3Q9UEY8 706 aaKnown RBP9.3□□□□□ -0.92
CHD2-213ENST00000628118 SYNGAP1Q96PV0 1343 aa9.3□□□□□ -0.92
CHD2-213ENST00000628118 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.29□□□□□ -0.92
CHD2-213ENST00000628118 ASB14A6NK59 587 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 POTEB2H3BUK9 544 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 COBLO75128 1261 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 CDKL5O76039 1030 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 PLEKHA8P1O95397 391 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 IGHA2P01877 340 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 RXRAP19793 462 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 NEK4P51957 841 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 SNAP25P60880 206 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 AKAP17AQ02040 695 aaKnown RBP9.29□□□□□ -0.92
CHD2-213ENST00000628118 USH1GQ495M9 461 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 MAP3K21Q5TCX8 1036 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 MAMDC4Q6UXC1 1216 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 RNF207Q6ZRF8 634 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 HOMER1Q86YM7 354 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 CCDC144CPQ8IYA2 1237 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 FAM177A1Q8N128 213 aaPredicted RBP9.29□□□□□ -0.92
CHD2-213ENST00000628118 FAM133AQ8N9E0 248 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 DNERQ8NFT8 737 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 NPLOC4Q8TAT6 608 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 TRIB2Q92519 343 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 MAML3Q96JK9 1138 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 ZFP91Q96JP5 570 aaPredicted RBP9.29□□□□□ -0.92
CHD2-213ENST00000628118 RNF26Q9BY78 433 aaPredicted RBP9.29□□□□□ -0.92
CHD2-213ENST00000628118 GLT8D2Q9H1C3 349 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 SLKQ9H2G2 1235 aaPredicted RBP9.29□□□□□ -0.92
CHD2-213ENST00000628118 CPVLQ9H3G5 476 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 HOMER2Q9NSB8 354 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 CYP39A1Q9NYL5 469 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 BIN2Q9UBW5 565 aaPredicted RBP9.29□□□□□ -0.92
CHD2-213ENST00000628118 NAP1L2Q9ULW6 460 aaPredicted RBP9.29□□□□□ -0.92
CHD2-213ENST00000628118 PCDHA1Q9Y5I3 950 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 SMCHD1A6NHR9 2005 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 RPTORQ8N122 1335 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 CNTNAP5Q8WYK1 1306 aa9.29□□□□□ -0.92
CHD2-213ENST00000628118 PLXNA1Q9UIW2 1896 aa9.28□□□□□ -0.92
CHD2-213ENST00000628118 CPLX1O14810 134 aa9.28□□□□□ -0.92
CHD2-213ENST00000628118 PRPF3O43395 683 aaKnown RBP9.28□□□□□ -0.92
CHD2-213ENST00000628118 ST18O60284 1047 aa9.28□□□□□ -0.92
CHD2-213ENST00000628118 MSCO60682 206 aa9.28□□□□□ -0.92
CHD2-213ENST00000628118 INHAP05111 366 aa9.28□□□□□ -0.92
CHD2-213ENST00000628118 IFNAR1P17181 557 aa9.28□□□□□ -0.92
CHD2-213ENST00000628118 CDC27P30260 824 aa9.28□□□□□ -0.92
CHD2-213ENST00000628118 MCM2P49736 904 aa9.28□□□□□ -0.92
CHD2-213ENST00000628118 AK2P54819 239 aa9.28□□□□□ -0.92
CHD2-213ENST00000628118 RPS6P62753 249 aaKnown RBP9.28□□□□□ -0.92
CHD2-213ENST00000628118 FUT2Q10981 343 aa9.28□□□□□ -0.92
CHD2-213ENST00000628118 SLC35G1Q2M3R5 365 aa9.28□□□□□ -0.92
CHD2-213ENST00000628118 MUM1L1Q5H9M0 696 aa9.28□□□□□ -0.92
CHD2-213ENST00000628118 PPP1R18Q6NYC8 613 aa9.28□□□□□ -0.92
CHD2-213ENST00000628118 NSMFQ6X4W1 530 aa9.28□□□□□ -0.92
CHD2-213ENST00000628118 TRIM22Q8IYM9 498 aa9.28□□□□□ -0.92
CHD2-213ENST00000628118 SH3TC2Q8TF17 1288 aa9.28□□□□□ -0.92
CHD2-213ENST00000628118 CCDC12Q8WUD4 166 aaPredicted RBP9.28□□□□□ -0.92
CHD2-213ENST00000628118 ZSCAN31Q96LW9 406 aaPredicted RBP9.28□□□□□ -0.92
CHD2-213ENST00000628118 TBC1D32Q96NH3 1257 aa9.28□□□□□ -0.92
CHD2-213ENST00000628118 TINF2Q9BSI4 451 aa9.28□□□□□ -0.92
CHD2-213ENST00000628118 HMX1Q9NP08 348 aaPredicted RBP9.28□□□□□ -0.92
CHD2-213ENST00000628118 FAM217BQ9NTX9 383 aaPredicted RBP9.28□□□□□ -0.92
CHD2-213ENST00000628118 PTPDC1A2A3K4 754 aa9.27□□□□□ -0.93
CHD2-213ENST00000628118 GCOM1H8Y6P7 765 aaPredicted RBP9.27□□□□□ -0.93
CHD2-213ENST00000628118 PIK3CDO00329 1044 aa9.27□□□□□ -0.93
CHD2-213ENST00000628118 NFIBO00712 420 aa9.27□□□□□ -0.93
CHD2-213ENST00000628118 PFKFB2O60825 505 aa9.27□□□□□ -0.93
CHD2-213ENST00000628118 PGK2P07205 417 aa9.27□□□□□ -0.93
CHD2-213ENST00000628118 GJB1P08034 283 aa9.27□□□□□ -0.93
CHD2-213ENST00000628118 POLR2MP0CAP2 368 aa9.27□□□□□ -0.93
CHD2-213ENST00000628118 ELNP15502 786 aa9.27□□□□□ -0.93
CHD2-213ENST00000628118 ADD1P35611 737 aaKnown RBP9.27□□□□□ -0.93
CHD2-213ENST00000628118 HSD17B4P51659 736 aa9.27□□□□□ -0.93
CHD2-213ENST00000628118 BAATQ14032 418 aaPredicted RBP9.27□□□□□ -0.93
CHD2-213ENST00000628118 PFKFB3Q16875 520 aaPredicted RBP9.27□□□□□ -0.93
CHD2-213ENST00000628118 MCTP2Q6DN12 878 aa9.27□□□□□ -0.93
CHD2-213ENST00000628118 RAB11FIP4Q86YS3 637 aa9.27□□□□□ -0.93
CHD2-213ENST00000628118 MORC4Q8TE76 937 aa9.27□□□□□ -0.93
CHD2-213ENST00000628118 CUL5Q93034 780 aa9.27□□□□□ -0.93
CHD2-213ENST00000628118 IWS1Q96ST2 819 aa9.27□□□□□ -0.93
CHD2-213ENST00000628118 KIF2CQ99661 725 aa9.27□□□□□ -0.93
CHD2-213ENST00000628118 ABHD16BQ9H3Z7 469 aa9.27□□□□□ -0.93
CHD2-213ENST00000628118 SH2B1Q9NRF2 756 aaPredicted RBP9.27□□□□□ -0.93
CHD2-213ENST00000628118 LIMCH1Q9UPQ0 1083 aa9.27□□□□□ -0.93
CHD2-213ENST00000628118 CNPY2Q9Y2B0 182 aa9.27□□□□□ -0.93
CHD2-213ENST00000628118 PPP1R11O60927 126 aaPredicted RBP9.26□□□□□ -0.93
CHD2-213ENST00000628118 CCL5P13501 91 aa9.26□□□□□ -0.93
CHD2-213ENST00000628118 CALML3P27482 149 aa9.26□□□□□ -0.93
CHD2-213ENST00000628118 ALDH5A1P51649 535 aaPredicted RBP9.26□□□□□ -0.93
CHD2-213ENST00000628118 CCT2P78371 535 aaKnown RBP9.26□□□□□ -0.93
CHD2-213ENST00000628118 CACNB2Q08289 660 aaPredicted RBP9.26□□□□□ -0.93
CHD2-213ENST00000628118 SSRP1Q08945 709 aaKnown RBP9.26□□□□□ -0.93
CHD2-213ENST00000628118 NTRK3Q16288 839 aa9.26□□□□□ -0.93
CHD2-213ENST00000628118 CCL14Q16627 93 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms