RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 USP17L13C9JLJ4 530 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 USP17L11C9JVI0 530 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 USP17L18D6R9N7 530 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 USP17L22D6RA61 530 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 USP17L17D6RBQ6 530 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 USP17L19D6RCP7 530 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 USP17L20D6RJB6 530 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 WDR46O15213 610 aaKnown RBP9.1□□□□□ -0.95
TCF4-260ENST00000627685 ORC4O43929 436 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 NMT2O60551 498 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 NDUFB10O96000 172 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 EN2P19622 333 aaPredicted RBP9.1□□□□□ -0.95
TCF4-260ENST00000627685 USP14P54578 494 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 USP17L24Q0WX57 530 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 INTS6LQ5JSJ4 861 aaKnown RBP9.1□□□□□ -0.95
TCF4-260ENST00000627685 RCSD1Q6JBY9 416 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 SPICE1Q8N0Z3 855 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 STK11IPQ8N1F8 1099 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 NEDD1Q8NHV4 660 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 LPAR1Q92633 364 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 MKL1Q969V6 931 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 PURBQ96QR8 312 aaKnown RBP9.1□□□□□ -0.95
TCF4-260ENST00000627685 CABP5Q9NP86 173 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 PAK6Q9NQU5 681 aaPredicted RBP9.1□□□□□ -0.95
TCF4-260ENST00000627685 MTMR4Q9NYA4 1195 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 FLRT1Q9NZU1 646 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 NYAP2Q9P242 653 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 LRRC37A2A6NM11 1700 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 MPHOSPH10O00566 681 aaKnown RBP9.09□□□□□ -0.95
TCF4-260ENST00000627685 TNPO2O14787 897 aaKnown RBP9.09□□□□□ -0.95
TCF4-260ENST00000627685 INHAP05111 366 aa9.09□□□□□ -0.95
TCF4-260ENST00000627685 GJB1P08034 283 aa9.09□□□□□ -0.95
TCF4-260ENST00000627685 HOXC6P09630 235 aa9.09□□□□□ -0.95
TCF4-260ENST00000627685 TDO2P48775 406 aa9.09□□□□□ -0.95
TCF4-260ENST00000627685 UBXN2AP68543 259 aa9.09□□□□□ -0.95
TCF4-260ENST00000627685 IRX3P78415 501 aaPredicted RBP9.09□□□□□ -0.95
TCF4-260ENST00000627685 DHX9Q08211 1270 aaKnown RBP9.09□□□□□ -0.95
TCF4-260ENST00000627685 GRB14Q14449 540 aa9.09□□□□□ -0.95
TCF4-260ENST00000627685 TMEM132BQ14DG7 1078 aa9.09□□□□□ -0.95
TCF4-260ENST00000627685 CCL14Q16627 93 aa9.09□□□□□ -0.95
TCF4-260ENST00000627685 MCMDC2Q4G0Z9 681 aa9.09□□□□□ -0.95
TCF4-260ENST00000627685 FAM47AQ5JRC9 791 aa9.09□□□□□ -0.95
TCF4-260ENST00000627685 GPR142Q7Z601 462 aa9.09□□□□□ -0.95
TCF4-260ENST00000627685 COA7Q96BR5 231 aa9.09□□□□□ -0.95
TCF4-260ENST00000627685 FGD4Q96M96 766 aa9.09□□□□□ -0.95
TCF4-260ENST00000627685 FEZ1Q99689 392 aa9.09□□□□□ -0.95
TCF4-260ENST00000627685 MOV10L1Q9BXT6 1211 aaKnown RBP9.09□□□□□ -0.95
TCF4-260ENST00000627685 KANSL2Q9H9L4 492 aa9.09□□□□□ -0.95
TCF4-260ENST00000627685 PGPEP1Q9NXJ5 209 aa9.09□□□□□ -0.95
TCF4-260ENST00000627685 RABGAP1Q9Y3P9 1069 aa9.09□□□□□ -0.95
TCF4-260ENST00000627685 COL11A1P12107 1806 aaPredicted RBP9.08□□□□□ -0.96
TCF4-260ENST00000627685 FRMPD3Q5JV73 1810 aa9.08□□□□□ -0.96
TCF4-260ENST00000627685 ADCY3O60266 1144 aa9.08□□□□□ -0.96
TCF4-260ENST00000627685 CCL5P13501 91 aa9.08□□□□□ -0.96
TCF4-260ENST00000627685 LRRFIP1Q32MZ4 808 aaKnown RBP9.08□□□□□ -0.96
TCF4-260ENST00000627685 FAM83BQ5T0W9 1011 aa9.08□□□□□ -0.96
TCF4-260ENST00000627685 C6orf118Q5T5N4 469 aa9.08□□□□□ -0.96
TCF4-260ENST00000627685 LRRC47Q8N1G4 583 aaKnown RBP9.08□□□□□ -0.96
TCF4-260ENST00000627685 GMCL1P1Q8NEA9 526 aa9.08□□□□□ -0.96
TCF4-260ENST00000627685 GPRC5AQ8NFJ5 357 aa9.08□□□□□ -0.96
TCF4-260ENST00000627685 NPLOC4Q8TAT6 608 aa9.08□□□□□ -0.96
TCF4-260ENST00000627685 PAGR1Q9BTK6 254 aa9.08□□□□□ -0.96
TCF4-260ENST00000627685 NAPBQ9H115 298 aa9.08□□□□□ -0.96
TCF4-260ENST00000627685 PRM3Q9NNZ6 103 aa9.08□□□□□ -0.96
TCF4-260ENST00000627685 PPP1R9AQ9ULJ8 1098 aa9.08□□□□□ -0.96
TCF4-260ENST00000627685 SYNPO2Q9UMS6 1093 aa9.08□□□□□ -0.96
TCF4-260ENST00000627685 ASTN1O14525 1302 aa9.07□□□□□ -0.96
TCF4-260ENST00000627685 ZNF536O15090 1300 aa9.07□□□□□ -0.96
TCF4-260ENST00000627685 F5H6K3 240 aa9.07□□□□□ -0.96
TCF4-260ENST00000627685 UPP2O95045 317 aa9.07□□□□□ -0.96
TCF4-260ENST00000627685 XRCC5P13010 732 aaKnown RBP9.07□□□□□ -0.96
TCF4-260ENST00000627685 TAL1P17542 331 aaPredicted RBP9.07□□□□□ -0.96
TCF4-260ENST00000627685 CHMLP26374 656 aa9.07□□□□□ -0.96
TCF4-260ENST00000627685 MAPK4P31152 587 aa9.07□□□□□ -0.96
TCF4-260ENST00000627685 GJA8P48165 433 aa9.07□□□□□ -0.96
TCF4-260ENST00000627685 PTH1RQ03431 593 aa9.07□□□□□ -0.96
TCF4-260ENST00000627685 KLRC3Q07444 240 aa9.07□□□□□ -0.96
TCF4-260ENST00000627685 NR1H3Q13133 447 aa9.07□□□□□ -0.96
TCF4-260ENST00000627685 AMOTL1Q8IY63 956 aa9.07□□□□□ -0.96
TCF4-260ENST00000627685 TRPV1Q8NER1 839 aa9.07□□□□□ -0.96
TCF4-260ENST00000627685 STAG1Q8WVM7 1258 aa9.07□□□□□ -0.96
TCF4-260ENST00000627685 SPATC1LQ9H0A9 340 aa9.07□□□□□ -0.96
TCF4-260ENST00000627685 ARHGEF10LQ9HCE6 1279 aa9.07□□□□□ -0.96
TCF4-260ENST00000627685 RIPK3Q9Y572 518 aa9.07□□□□□ -0.96
TCF4-260ENST00000627685 LCTP09848 1927 aa9.07□□□□□ -0.96
TCF4-260ENST00000627685 DNAJC25-GNG10A0A024R161 153 aa9.06□□□□□ -0.96
TCF4-260ENST00000627685 VWA5AO00534 786 aa9.06□□□□□ -0.96
TCF4-260ENST00000627685 ATP2A1O14983 1001 aa9.06□□□□□ -0.96
TCF4-260ENST00000627685 COBLO75128 1261 aa9.06□□□□□ -0.96
TCF4-260ENST00000627685 MYCP01106 439 aaPredicted RBP9.06□□□□□ -0.96
TCF4-260ENST00000627685 SNHG28P0DPA3 235 aa9.06□□□□□ -0.96
TCF4-260ENST00000627685 BMP2P12643 396 aa9.06□□□□□ -0.96
TCF4-260ENST00000627685 HAND2P61296 217 aa9.06□□□□□ -0.96
TCF4-260ENST00000627685 TFAP4Q01664 338 aa9.06□□□□□ -0.96
TCF4-260ENST00000627685 CBLBQ13191 982 aa9.06□□□□□ -0.96
TCF4-260ENST00000627685 COG2Q14746 738 aa9.06□□□□□ -0.96
TCF4-260ENST00000627685 SLC35G1Q2M3R5 365 aa9.06□□□□□ -0.96
TCF4-260ENST00000627685 STOX1Q6ZVD7 989 aa9.06□□□□□ -0.96
TCF4-260ENST00000627685 SHCBP1Q8NEM2 672 aa9.06□□□□□ -0.96
TCF4-260ENST00000627685 SOCS4Q8WXH5 440 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms