RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 RRP36Q96EU6 259 aaKnown RBP19.41■□□□□ 0.7
UBE3D-208ENST00000626828 PURBQ96QR8 312 aaKnown RBP19.41■□□□□ 0.7
UBE3D-208ENST00000626828 DNM1LO00429 736 aa19.4■□□□□ 0.7
UBE3D-208ENST00000626828 ALDH5A1P51649 535 aaPredicted RBP19.4■□□□□ 0.7
UBE3D-208ENST00000626828 CCDC144BQ3MJ40 725 aa19.4■□□□□ 0.7
UBE3D-208ENST00000626828 APOA5Q6Q788 366 aa19.4■□□□□ 0.7
UBE3D-208ENST00000626828 SLC30A10Q6XR72 485 aa19.4■□□□□ 0.7
UBE3D-208ENST00000626828 SRBD1Q8N5C6 995 aaKnown RBP19.4■□□□□ 0.7
UBE3D-208ENST00000626828 XPNPEP3Q9NQH7 507 aa19.4■□□□□ 0.7
UBE3D-208ENST00000626828 KBTBD13C9JR72 458 aa19.39■□□□□ 0.69
UBE3D-208ENST00000626828 ZBTB43O43298 467 aa19.39■□□□□ 0.69
UBE3D-208ENST00000626828 PPP1R11O60927 126 aaPredicted RBP19.39■□□□□ 0.69
UBE3D-208ENST00000626828 DUSP11O75319 330 aaKnown RBP19.39■□□□□ 0.69
UBE3D-208ENST00000626828 COL6A1P12109 1028 aa19.39■□□□□ 0.69
UBE3D-208ENST00000626828 RXRAP19793 462 aa19.39■□□□□ 0.69
UBE3D-208ENST00000626828 PPP2R5BQ15173 497 aa19.39■□□□□ 0.69
UBE3D-208ENST00000626828 GJC2Q5T442 439 aaPredicted RBP19.39■□□□□ 0.69
UBE3D-208ENST00000626828 IQSEC1Q6DN90 963 aa19.39■□□□□ 0.69
UBE3D-208ENST00000626828 Q6ZUG5 572 aa19.39■□□□□ 0.69
UBE3D-208ENST00000626828 RNF180Q86T96 592 aa19.39■□□□□ 0.69
UBE3D-208ENST00000626828 FBXL16Q8N461 479 aa19.39■□□□□ 0.69
UBE3D-208ENST00000626828 SYTL5Q8TDW5 730 aaPredicted RBP19.39■□□□□ 0.69
UBE3D-208ENST00000626828 KATNBL1Q9H079 304 aa19.39■□□□□ 0.69
UBE3D-208ENST00000626828 VTA1Q9NP79 307 aa19.39■□□□□ 0.69
UBE3D-208ENST00000626828 RBM28Q9NW13 759 aaKnown RBP19.39■□□□□ 0.69
UBE3D-208ENST00000626828 BRPF3Q9ULD4 1205 aa19.39■□□□□ 0.69
UBE3D-208ENST00000626828 NR2E3Q9Y5X4 410 aa19.39■□□□□ 0.69
UBE3D-208ENST00000626828 ASTN1O14525 1302 aa19.39■□□□□ 0.69
UBE3D-208ENST00000626828 CFBP00751 764 aa19.38■□□□□ 0.69
UBE3D-208ENST00000626828 MYCNP04198 464 aaPredicted RBP19.38■□□□□ 0.69
UBE3D-208ENST00000626828 CPA1P15085 419 aa19.38■□□□□ 0.69
UBE3D-208ENST00000626828 CASTP20810 708 aaKnown RBP19.38■□□□□ 0.69
UBE3D-208ENST00000626828 RPS6KB1P23443 525 aa19.38■□□□□ 0.69
UBE3D-208ENST00000626828 RCAN1P53805 252 aa19.38■□□□□ 0.69
UBE3D-208ENST00000626828 LRRC41Q15345 812 aa19.38■□□□□ 0.69
UBE3D-208ENST00000626828 MICU3Q86XE3 530 aa19.38■□□□□ 0.69
UBE3D-208ENST00000626828 NSUN6Q8TEA1 469 aaKnown RBP19.38■□□□□ 0.69
UBE3D-208ENST00000626828 PIBF1Q8WXW3 757 aa19.38■□□□□ 0.69
UBE3D-208ENST00000626828 TM6SF1Q9BZW5 370 aa19.38■□□□□ 0.69
UBE3D-208ENST00000626828 SENP6Q9GZR1 1112 aaPredicted RBP19.38■□□□□ 0.69
UBE3D-208ENST00000626828 SPC25Q9HBM1 224 aa19.38■□□□□ 0.69
UBE3D-208ENST00000626828 SEC63Q9UGP8 760 aaKnown RBP19.38■□□□□ 0.69
UBE3D-208ENST00000626828 MKI67P46013 3256 aaKnown RBP19.38■□□□□ 0.69
UBE3D-208ENST00000626828 KLF18A0A0U1RQI7 1052 aa19.37■□□□□ 0.69
UBE3D-208ENST00000626828 EVI5O60447 810 aa19.37■□□□□ 0.69
UBE3D-208ENST00000626828 PLEKHA8P1O95397 391 aa19.37■□□□□ 0.69
UBE3D-208ENST00000626828 GHRHRQ02643 423 aa19.37■□□□□ 0.69
UBE3D-208ENST00000626828 TNFAIP2Q03169 654 aa19.37■□□□□ 0.69
UBE3D-208ENST00000626828 PDE4DQ08499 809 aa19.37■□□□□ 0.69
UBE3D-208ENST00000626828 TAPT1Q6NXT6 567 aa19.37■□□□□ 0.69
UBE3D-208ENST00000626828 RUFY3Q7L099 469 aa19.37■□□□□ 0.69
UBE3D-208ENST00000626828 EEPD1Q7L9B9 569 aa19.37■□□□□ 0.69
UBE3D-208ENST00000626828 RAB11FIP4Q86YS3 637 aa19.37■□□□□ 0.69
UBE3D-208ENST00000626828 TAAR1Q96RJ0 339 aa19.37■□□□□ 0.69
UBE3D-208ENST00000626828 IWS1Q96ST2 819 aa19.37■□□□□ 0.69
UBE3D-208ENST00000626828 ZSWIM6Q9HCJ5 1215 aa19.37■□□□□ 0.69
UBE3D-208ENST00000626828 PGK1P00558 417 aa19.36■□□□□ 0.69
UBE3D-208ENST00000626828 HSD17B4P51659 736 aa19.36■□□□□ 0.69
UBE3D-208ENST00000626828 RTN1Q16799 776 aa19.36■□□□□ 0.69
UBE3D-208ENST00000626828 PRPF38BQ5VTL8 546 aaKnown RBP19.36■□□□□ 0.69
UBE3D-208ENST00000626828 TMTC3Q6ZXV5 915 aa19.36■□□□□ 0.69
UBE3D-208ENST00000626828 NOL8Q76FK4 1167 aaKnown RBP19.36■□□□□ 0.69
UBE3D-208ENST00000626828 CMTR1Q8N1G2 835 aaKnown RBP19.36■□□□□ 0.69
UBE3D-208ENST00000626828 CCDC82Q8N4S0 544 aa19.36■□□□□ 0.69
UBE3D-208ENST00000626828 BRF1Q92994 677 aa19.36■□□□□ 0.69
UBE3D-208ENST00000626828 RMDN3Q96TC7 470 aa19.36■□□□□ 0.69
UBE3D-208ENST00000626828 TSEN34Q9BSV6 310 aaKnown RBP19.36■□□□□ 0.69
UBE3D-208ENST00000626828 AGXT2Q9BYV1 514 aa19.36■□□□□ 0.69
UBE3D-208ENST00000626828 CYP46A1Q9Y6A2 500 aa19.36■□□□□ 0.69
UBE3D-208ENST00000626828 FRMPD3Q5JV73 1810 aa19.35■□□□□ 0.69
UBE3D-208ENST00000626828 CCDC196A0A1B0GTZ2 297 aa19.35■□□□□ 0.69
UBE3D-208ENST00000626828 GCOM1H8Y6P7 765 aaPredicted RBP19.35■□□□□ 0.69
UBE3D-208ENST00000626828 OPLAHO14841 1288 aa19.35■□□□□ 0.69
UBE3D-208ENST00000626828 POLR2MP0CAP2 368 aa19.35■□□□□ 0.69
UBE3D-208ENST00000626828 EDNRBP24530 442 aa19.35■□□□□ 0.69
UBE3D-208ENST00000626828 ARHGEF16Q5VV41 709 aa19.35■□□□□ 0.69
UBE3D-208ENST00000626828 PDGFCQ9NRA1 345 aa19.35■□□□□ 0.69
UBE3D-208ENST00000626828 NAP1L2Q9ULW6 460 aaPredicted RBP19.35■□□□□ 0.69
UBE3D-208ENST00000626828 Q9Y3F1 56 aa19.35■□□□□ 0.69
UBE3D-208ENST00000626828 DDX49Q9Y6V7 483 aaKnown RBP19.35■□□□□ 0.69
UBE3D-208ENST00000626828 LCTP09848 1927 aa19.35■□□□□ 0.69
UBE3D-208ENST00000626828 RBM47A0AV96 593 aaKnown RBP19.34■□□□□ 0.69
UBE3D-208ENST00000626828 GOLGA8AA7E2F4 631 aa19.34■□□□□ 0.69
UBE3D-208ENST00000626828 GOLGA8BA8MQT2 603 aa19.34■□□□□ 0.69
UBE3D-208ENST00000626828 ADAMTS4O75173 837 aa19.34■□□□□ 0.69
UBE3D-208ENST00000626828 ADCYAP1R1P41586 468 aa19.34■□□□□ 0.69
UBE3D-208ENST00000626828 GJA9P57773 515 aa19.34■□□□□ 0.69
UBE3D-208ENST00000626828 APOBRQ0VD83 1088 aa19.34■□□□□ 0.69
UBE3D-208ENST00000626828 FBXO16Q8IX29 292 aaPredicted RBP19.34■□□□□ 0.69
UBE3D-208ENST00000626828 KLHDC9Q8NEP7 349 aa19.34■□□□□ 0.69
UBE3D-208ENST00000626828 COL20A1Q9P218 1284 aa19.34■□□□□ 0.69
UBE3D-208ENST00000626828 ANAPC15P60006 121 aa19.33■□□□□ 0.68
UBE3D-208ENST00000626828 STXBP2Q15833 593 aa19.33■□□□□ 0.68
UBE3D-208ENST00000626828 PCSK9Q8NBP7 692 aaKnown RBP19.33■□□□□ 0.68
UBE3D-208ENST00000626828 LENG1Q96BZ8 264 aaPredicted RBP19.33■□□□□ 0.68
UBE3D-208ENST00000626828 WDR11Q9BZH6 1224 aa19.33■□□□□ 0.68
UBE3D-208ENST00000626828 AP5M1Q9H0R1 490 aa19.33■□□□□ 0.68
UBE3D-208ENST00000626828 UPF3AQ9H1J1 476 aaKnown RBP19.33■□□□□ 0.68
UBE3D-208ENST00000626828 PHF24Q9UPV7 400 aa19.33■□□□□ 0.68
UBE3D-208ENST00000626828 GNEQ9Y223 722 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms