RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 SHISA4Q96DD7 197 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 PAGR1Q9BTK6 254 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 KCNA6P17658 529 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 SCTRP47872 440 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 CCNHP51946 323 aaPredicted RBP16.8■□□□□ 0.28
PMS1-221ENST00000624204 DRP2Q13474 957 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 ZNF662Q6ZS27 426 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 PIK3AP1Q6ZUJ8 805 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 EPB41L4AQ9HCS5 686 aaPredicted RBP16.8■□□□□ 0.28
PMS1-221ENST00000624204 GGT7Q9UJ14 662 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 TACC3Q9Y6A5 838 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 RASSF7Q02833 373 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 MYO1EQ12965 1108 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 PNMA8AQ86V59 439 aaPredicted RBP16.8■□□□□ 0.28
PMS1-221ENST00000624204 ADSSL1Q8N142 457 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 PIK3R5Q8WYR1 880 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 RUBCNQ92622 972 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 SEC16BQ96JE7 1060 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 UIMC1Q96RL1 719 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 NUP58Q9BVL2 599 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 KRT23Q9C075 422 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 AXIN2Q9Y2T1 843 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 BMP15O95972 392 aa16.79■□□□□ 0.28
PMS1-221ENST00000624204 ITIH3Q06033 890 aa16.79■□□□□ 0.28
PMS1-221ENST00000624204 TBC1D22AQ8WUA7 517 aa16.79■□□□□ 0.28
PMS1-221ENST00000624204 STRBPQ96SI9 672 aaKnown RBP16.79■□□□□ 0.28
PMS1-221ENST00000624204 MMRN2Q9H8L6 949 aa16.79■□□□□ 0.28
PMS1-221ENST00000624204 CNNM2Q9H8M5 875 aa16.79■□□□□ 0.28
PMS1-221ENST00000624204 CNNM1Q9NRU3 951 aa16.79■□□□□ 0.28
PMS1-221ENST00000624204 LEMD3Q9Y2U8 911 aa16.79■□□□□ 0.28
PMS1-221ENST00000624204 TATP17735 454 aaPredicted RBP16.79■□□□□ 0.28
PMS1-221ENST00000624204 FAM69CQ0P6D2 419 aa16.79■□□□□ 0.28
PMS1-221ENST00000624204 ANKLE2Q86XL3 938 aa16.79■□□□□ 0.28
PMS1-221ENST00000624204 EGFL6Q8IUX8 553 aa16.79■□□□□ 0.28
PMS1-221ENST00000624204 TCP11Q8WWU5 503 aa16.79■□□□□ 0.28
PMS1-221ENST00000624204 CASKIN2Q8WXE0 1202 aa16.79■□□□□ 0.28
PMS1-221ENST00000624204 RASSF10A6NK89 507 aa16.79■□□□□ 0.28
PMS1-221ENST00000624204 PP2D1A8MPX8 630 aa16.79■□□□□ 0.28
PMS1-221ENST00000624204 TDRD12Q587J7 1177 aaKnown RBP16.79■□□□□ 0.28
PMS1-221ENST00000624204 HPS3Q969F9 1004 aa16.79■□□□□ 0.28
PMS1-221ENST00000624204 SPDL1Q96EA4 605 aa16.79■□□□□ 0.28
PMS1-221ENST00000624204 CNOT6LQ96LI5 555 aaKnown RBP16.79■□□□□ 0.28
PMS1-221ENST00000624204 SALL4Q9UJQ4 1053 aa16.79■□□□□ 0.28
PMS1-221ENST00000624204 RGPD2P0DJD1 1756 aa16.78■□□□□ 0.28
PMS1-221ENST00000624204 PHF20L1A8MW92 1017 aa16.78■□□□□ 0.28
PMS1-221ENST00000624204 FTCDO95954 541 aa16.78■□□□□ 0.28
PMS1-221ENST00000624204 CLTAP09496 248 aa16.78■□□□□ 0.28
PMS1-221ENST00000624204 DNAAF5Q86Y56 855 aa16.78■□□□□ 0.28
PMS1-221ENST00000624204 HVCN1Q96D96 273 aa16.78■□□□□ 0.28
PMS1-221ENST00000624204 TLR10Q9BXR5 811 aa16.78■□□□□ 0.28
PMS1-221ENST00000624204 TANGO6Q9C0B7 1094 aa16.78■□□□□ 0.28
PMS1-221ENST00000624204 ATP6V0A4Q9HBG4 840 aa16.78■□□□□ 0.28
PMS1-221ENST00000624204 ARHGAP20Q9P2F6 1191 aa16.78■□□□□ 0.28
PMS1-221ENST00000624204 IFIT5Q13325 482 aaKnown RBP16.78■□□□□ 0.28
PMS1-221ENST00000624204 GLE1Q53GS7 698 aaKnown RBP16.78■□□□□ 0.28
PMS1-221ENST00000624204 TTYH3Q9C0H2 523 aa16.78■□□□□ 0.28
PMS1-221ENST00000624204 PPP4R3AQ6IN85 833 aa16.77■□□□□ 0.28
PMS1-221ENST00000624204 LDHAL6AQ6ZMR3 332 aa16.77■□□□□ 0.28
PMS1-221ENST00000624204 MAGEB6Q8N7X4 407 aa16.77■□□□□ 0.28
PMS1-221ENST00000624204 RNF217Q8TC41 542 aa16.77■□□□□ 0.28
PMS1-221ENST00000624204 TRIM31Q9BZY9 425 aa16.77■□□□□ 0.28
PMS1-221ENST00000624204 THAP9Q9H5L6 903 aa16.77■□□□□ 0.28
PMS1-221ENST00000624204 NBPF26B4DH59 902 aa16.77■□□□□ 0.28
PMS1-221ENST00000624204 CTNNA1P35221 906 aaKnown RBP16.77■□□□□ 0.28
PMS1-221ENST00000624204 NBPF10Q6P3W6 841 aaKnown RBP16.77■□□□□ 0.28
PMS1-221ENST00000624204 NBPF15Q8N660 670 aa16.77■□□□□ 0.28
PMS1-221ENST00000624204 MTMR8Q96EF0 704 aa16.77■□□□□ 0.28
PMS1-221ENST00000624204 STAMBPL1Q96FJ0 436 aa16.77■□□□□ 0.28
PMS1-221ENST00000624204 LMO7Q8WWI1 1683 aa16.77■□□□□ 0.28
PMS1-221ENST00000624204 PRLRP16471 622 aa16.77■□□□□ 0.27
PMS1-221ENST00000624204 ATP2C1P98194 919 aaPredicted RBP16.77■□□□□ 0.27
PMS1-221ENST00000624204 CCDC178Q5BJE1 867 aa16.77■□□□□ 0.27
PMS1-221ENST00000624204 GKAP1Q5VSY0 366 aaPredicted RBP16.77■□□□□ 0.27
PMS1-221ENST00000624204 RRAGAQ7L523 313 aa16.77■□□□□ 0.27
PMS1-221ENST00000624204 RASGRP4Q8TDF6 673 aa16.77■□□□□ 0.27
PMS1-221ENST00000624204 NSMCE1Q8WV22 266 aa16.77■□□□□ 0.27
PMS1-221ENST00000624204 UBLCP1Q8WVY7 318 aaPredicted RBP16.77■□□□□ 0.27
PMS1-221ENST00000624204 NOX5Q96PH1 765 aa16.77■□□□□ 0.27
PMS1-221ENST00000624204 GDF3Q9NR23 364 aa16.77■□□□□ 0.27
PMS1-221ENST00000624204 AFDNP55196 1824 aaKnown RBP16.76■□□□□ 0.27
PMS1-221ENST00000624204 NKRFO15226 690 aaKnown RBP eCLIP16.76■□□□□ 0.27
PMS1-221ENST00000624204 PLEKHA8P1O95397 391 aa16.76■□□□□ 0.27
PMS1-221ENST00000624204 UBE3CQ15386 1083 aa16.76■□□□□ 0.27
PMS1-221ENST00000624204 RETREG2Q8NC44 543 aa16.76■□□□□ 0.27
PMS1-221ENST00000624204 NOD2Q9HC29 1040 aa16.76■□□□□ 0.27
PMS1-221ENST00000624204 MYO5AQ9Y4I1 1855 aaKnown RBP16.76■□□□□ 0.27
PMS1-221ENST00000624204 GFPT1Q06210 699 aaPredicted RBP16.76■□□□□ 0.27
PMS1-221ENST00000624204 UHMK1Q8TAS1 419 aaKnown RBP16.76■□□□□ 0.27
PMS1-221ENST00000624204 RNF26Q9BY78 433 aaPredicted RBP16.76■□□□□ 0.27
PMS1-221ENST00000624204 NOVA2Q9UNW9 492 aaKnown RBP16.76■□□□□ 0.27
PMS1-221ENST00000624204 LTN1O94822 1766 aa16.76■□□□□ 0.27
PMS1-221ENST00000624204 PHKA1P46020 1223 aa16.76■□□□□ 0.27
PMS1-221ENST00000624204 CABP4P57796 275 aa16.76■□□□□ 0.27
PMS1-221ENST00000624204 ZNF572Q7Z3I7 529 aaPredicted RBP16.76■□□□□ 0.27
PMS1-221ENST00000624204 PHF20Q9BVI0 1012 aa16.76■□□□□ 0.27
PMS1-221ENST00000624204 GOLPH3Q9H4A6 298 aa16.76■□□□□ 0.27
PMS1-221ENST00000624204 KIF9Q9HAQ2 790 aa16.76■□□□□ 0.27
PMS1-221ENST00000624204 TMBIM4Q9HC24 238 aa16.76■□□□□ 0.27
PMS1-221ENST00000624204 GGA2Q9UJY4 613 aa16.76■□□□□ 0.27
PMS1-221ENST00000624204 L3MBTL1Q9Y468 752 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms