RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 NKX2-4Q9H2Z4 354 aa5.62□□□□□ -1.51
ATRX-209ENST00000623242 RRP7BPQ9NSQ0 103 aa5.62□□□□□ -1.51
ATRX-209ENST00000623242 DUSP13Q9UII6 198 aa5.62□□□□□ -1.51
ATRX-209ENST00000623242 SPAG9O60271 1321 aaKnown RBP5.62□□□□□ -1.51
ATRX-209ENST00000623242 RRBP1Q9P2E9 1410 aaKnown RBP5.62□□□□□ -1.51
ATRX-209ENST00000623242 DENND4BO75064 1496 aaPredicted RBP5.62□□□□□ -1.51
ATRX-209ENST00000623242 NEO1Q92859 1461 aa5.62□□□□□ -1.51
ATRX-209ENST00000623242 PREX2Q70Z35 1606 aa5.62□□□□□ -1.51
ATRX-209ENST00000623242 TSPOAP1O95153 1857 aa5.62□□□□□ -1.51
ATRX-209ENST00000623242 TMEM82A0PJX8 343 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 STXBP3O00186 592 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 ARNTLO00327 626 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 AURKAO14965 403 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 PRODHO43272 600 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 DLX3O60479 287 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 CENPBP07199 599 aaPredicted RBP5.61□□□□□ -1.51
ATRX-209ENST00000623242 CD3EP07766 207 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 SYPP08247 313 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 PABPC1P11940 636 aaKnown RBP5.61□□□□□ -1.51
ATRX-209ENST00000623242 SPINK2P20155 84 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 CD97P48960 835 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 CEBPAP49715 358 aaPredicted RBP5.61□□□□□ -1.51
ATRX-209ENST00000623242 TEKQ02763 1124 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 PRSS53Q2L4Q9 553 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 TMEM67Q5HYA8 995 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 DENND5AQ6IQ26 1287 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 ZNF574Q6ZN55 896 aaPredicted RBP5.61□□□□□ -1.51
ATRX-209ENST00000623242 ZNF662Q6ZS27 426 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 CREG2Q8IUH2 290 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 KREMEN2Q8NCW0 462 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 ZSWIM2Q8NEG5 633 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 SYCP2Q9BX26 1530 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 CFAP74Q9C0B2 1584 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 CYP26B1Q9NR63 512 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 VAV3Q9UKW4 847 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 TCFL5Q9UL49 500 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 ZNF281Q9Y2X9 895 aa5.61□□□□□ -1.51
ATRX-209ENST00000623242 CDC42BPAQ5VT25 1732 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 MAP3K4Q9Y6R4 1608 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 ARAP3Q8WWN8 1544 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 CCDC141Q6ZP82 1450 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 DAPK1P53355 1430 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 KIAA1107Q9UPP5 1409 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 ANKRD30AQ9BXX3 1397 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 ARID4BQ4LE39 1312 aaPredicted RBP5.6□□□□□ -1.51
ATRX-209ENST00000623242 TRBV23-1A0A0A0MS06 115 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 PPP1R12AO14974 1030 aaPredicted RBP5.6□□□□□ -1.51
ATRX-209ENST00000623242 COBLO75128 1261 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 ADAMTS4O75173 837 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 CDC45O75419 566 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 PRNPP04156 253 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 SCG5P05408 212 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 HSD3B2P26439 372 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 LTKP29376 864 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 POU4F1Q01851 419 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 SCRN1Q12765 414 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 NTRK3Q16288 839 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 PLEKHG4Q58EX7 1191 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 SLC35F1Q5T1Q4 408 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 INTS5Q6P9B9 1019 aaKnown RBP5.6□□□□□ -1.51
ATRX-209ENST00000623242 NSMFQ6X4W1 530 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 TMPRSS7Q7RTY8 843 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 DTX1Q86Y01 620 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 HOMER1Q86YM7 354 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 CRACR2BQ8N4Y2 399 aaPredicted RBP5.6□□□□□ -1.51
ATRX-209ENST00000623242 TMEM145Q8NBT3 493 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 APPBP2Q92624 585 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 COPS5Q92905 334 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 SLC26A8Q96RN1 970 aa5.6□□□□□ -1.51
ATRX-209ENST00000623242 BSDC1Q9NW68 430 aaPredicted RBP5.6□□□□□ -1.51
ATRX-209ENST00000623242 MRPS23Q9Y3D9 190 aaKnown RBP5.6□□□□□ -1.51
ATRX-209ENST00000623242 SAMD9LQ8IVG5 1584 aa5.59□□□□□ -1.51
ATRX-209ENST00000623242 TCOF1Q13428 1488 aaKnown RBP5.59□□□□□ -1.51
ATRX-209ENST00000623242 C9orf84Q5VXU9 1444 aa5.59□□□□□ -1.51
ATRX-209ENST00000623242 TRAPPC8Q9Y2L5 1435 aa5.59□□□□□ -1.51
ATRX-209ENST00000623242 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.59□□□□□ -1.51
ATRX-209ENST00000623242 BLACEA4D250 179 aa5.59□□□□□ -1.51
ATRX-209ENST00000623242 KIAA1324LA8MWY0 1029 aaPredicted RBP5.59□□□□□ -1.51
ATRX-209ENST00000623242 FKTNO75072 461 aa5.59□□□□□ -1.51
ATRX-209ENST00000623242 THBDP07204 575 aa5.59□□□□□ -1.51
ATRX-209ENST00000623242 SNRPB2P08579 225 aaKnown RBP5.59□□□□□ -1.51
ATRX-209ENST00000623242 C6orf222P0C671 652 aaPredicted RBP5.59□□□□□ -1.51
ATRX-209ENST00000623242 CD8BP10966 210 aa5.59□□□□□ -1.51
ATRX-209ENST00000623242 HOXC12P31275 282 aa5.59□□□□□ -1.51
ATRX-209ENST00000623242 GRIK1P39086 918 aa5.59□□□□□ -1.51
ATRX-209ENST00000623242 ECI1P42126 302 aa5.59□□□□□ -1.51
ATRX-209ENST00000623242 PCBP3P57721 371 aaKnown RBP5.59□□□□□ -1.51
ATRX-209ENST00000623242 EGR3Q06889 387 aa5.59□□□□□ -1.51
ATRX-209ENST00000623242 CBX2Q14781 532 aaPredicted RBP5.59□□□□□ -1.51
ATRX-209ENST00000623242 CWF19L1Q69YN2 538 aaKnown RBP5.59□□□□□ -1.51
ATRX-209ENST00000623242 RNF111Q6ZNA4 994 aa5.59□□□□□ -1.51
ATRX-209ENST00000623242 KIAA0907Q7Z7F0 614 aaPredicted RBP5.59□□□□□ -1.51
ATRX-209ENST00000623242 SCUBE1Q8IWY4 988 aa5.59□□□□□ -1.51
ATRX-209ENST00000623242 NPLOC4Q8TAT6 608 aa5.59□□□□□ -1.51
ATRX-209ENST00000623242 FRS2Q8WU20 508 aa5.59□□□□□ -1.51
ATRX-209ENST00000623242 ASB11Q8WXH4 323 aa5.59□□□□□ -1.51
ATRX-209ENST00000623242 MISP3Q96FF7 219 aa5.59□□□□□ -1.51
ATRX-209ENST00000623242 CDC6Q99741 560 aa5.59□□□□□ -1.51
ATRX-209ENST00000623242 DHRS4Q9BTZ2 278 aa5.59□□□□□ -1.51
ATRX-209ENST00000623242 GPRC5CQ9NQ84 441 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms