RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 PRR12Q9ULL5 1215 aa18.41■□□□□ 0.54
LDB3-208ENST00000623007 PPP2R3BQ9Y5P8 575 aa18.41■□□□□ 0.54
LDB3-208ENST00000623007 H7C1D1 291 aa18.41■□□□□ 0.54
LDB3-208ENST00000623007 FDX1P10109 184 aa18.41■□□□□ 0.54
LDB3-208ENST00000623007 BMP6P22004 513 aa18.41■□□□□ 0.54
LDB3-208ENST00000623007 UBASH3AP57075 661 aa18.41■□□□□ 0.54
LDB3-208ENST00000623007 RASA3Q14644 834 aa18.41■□□□□ 0.54
LDB3-208ENST00000623007 KARSQ15046 597 aaKnown RBP18.41■□□□□ 0.54
LDB3-208ENST00000623007 ISM2Q6H9L7 571 aa18.41■□□□□ 0.54
LDB3-208ENST00000623007 ANKRD20A12PQ8NF67 263 aa18.41■□□□□ 0.54
LDB3-208ENST00000623007 MBOAT7Q96N66 472 aa18.41■□□□□ 0.54
LDB3-208ENST00000623007 ANO3Q9BYT9 981 aa18.41■□□□□ 0.54
LDB3-208ENST00000623007 MRPL11Q9Y3B7 192 aaKnown RBP18.41■□□□□ 0.54
LDB3-208ENST00000623007 NFE2L3Q9Y4A8 694 aa18.41■□□□□ 0.54
LDB3-208ENST00000623007 A0A1W2PRG0 241 aa18.4■□□□□ 0.54
LDB3-208ENST00000623007 CDK11BP21127 795 aaKnown RBP18.4■□□□□ 0.54
LDB3-208ENST00000623007 LMOD1P29536 600 aaPredicted RBP18.4■□□□□ 0.54
LDB3-208ENST00000623007 TECP42680 631 aa18.4■□□□□ 0.54
LDB3-208ENST00000623007 NBPF9Q3BBW0 867 aa18.4■□□□□ 0.54
LDB3-208ENST00000623007 POTEDQ86YR6 584 aa18.4■□□□□ 0.54
LDB3-208ENST00000623007 C7orf25Q9BPX7 421 aa18.4■□□□□ 0.54
LDB3-208ENST00000623007 RANBP17Q9H2T7 1088 aaKnown RBP18.4■□□□□ 0.54
LDB3-208ENST00000623007 IFNKQ9P0W0 207 aa18.4■□□□□ 0.54
LDB3-208ENST00000623007 RWDD2AQ9UIY3 292 aa18.4■□□□□ 0.54
LDB3-208ENST00000623007 ABCB11O95342 1321 aa18.39■□□□□ 0.53
LDB3-208ENST00000623007 SYNRGQ9UMZ2 1314 aa18.39■□□□□ 0.53
LDB3-208ENST00000623007 A0A087WWV3 80 aa18.39■□□□□ 0.53
LDB3-208ENST00000623007 TXKP42681 527 aa18.39■□□□□ 0.53
LDB3-208ENST00000623007 PTGER2P43116 358 aa18.39■□□□□ 0.53
LDB3-208ENST00000623007 MICALL2Q8IY33 904 aa18.39■□□□□ 0.53
LDB3-208ENST00000623007 XPO4Q9C0E2 1151 aaKnown RBP18.39■□□□□ 0.53
LDB3-208ENST00000623007 TTC12Q9H892 705 aaPredicted RBP18.39■□□□□ 0.53
LDB3-208ENST00000623007 CNOT7Q9UIV1 285 aaKnown RBP18.39■□□□□ 0.53
LDB3-208ENST00000623007 PCDHA12Q9UN75 941 aa18.39■□□□□ 0.53
LDB3-208ENST00000623007 MEIS2O14770 477 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 WDR46O15213 610 aaKnown RBP18.38■□□□□ 0.53
LDB3-208ENST00000623007 OFD1O75665 1012 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 RHOBTB3O94955 611 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 CYP3A4P08684 503 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 ZNF18P17022 549 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 CIITAP33076 1130 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 SREBF1P36956 1147 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 USP14P54578 494 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 RRP1BQ14684 758 aaKnown RBP18.38■□□□□ 0.53
LDB3-208ENST00000623007 Q4G0T1 1027 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 COBLL1Q53SF7 1204 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 CNNM4Q6P4Q7 775 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 SV2BQ7L1I2 683 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 GRAMD1CQ8IYS0 662 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 ERMNQ8TAM6 284 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 KIAA1524Q8TCG1 905 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 FAM20AQ96MK3 541 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 DEFB129Q9H1M3 183 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 FANCLQ9NW38 375 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 MAP3K20Q9NYL2 800 aaKnown RBP18.38■□□□□ 0.53
LDB3-208ENST00000623007 PLCG1P19174 1290 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 PTGS1P23219 599 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 GMPSP49915 693 aaPredicted RBP18.38■□□□□ 0.53
LDB3-208ENST00000623007 TERF1P54274 439 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 CUL4BQ13620 913 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 UBE2SQ16763 222 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 TPD52L1Q16890 204 aaPredicted RBP18.38■□□□□ 0.53
LDB3-208ENST00000623007 KIF4BQ2VIQ3 1234 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 FILIP1LQ4L180 1135 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 NAALADL2Q58DX5 795 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 HAUS3Q68CZ6 603 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 LRRC8AQ8IWT6 810 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 CCDC112Q8NEF3 446 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 NOC3LQ8WTT2 800 aaKnown RBP18.38■□□□□ 0.53
LDB3-208ENST00000623007 FEZ1Q99689 392 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 KIAA1683Q9H0B3 1180 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 AS3MTQ9HBK9 375 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 RTN4Q9NQC3 1192 aaKnown RBP18.38■□□□□ 0.53
LDB3-208ENST00000623007 SPTLC3Q9NUV7 552 aa18.38■□□□□ 0.53
LDB3-208ENST00000623007 PVALEFA0A1B0GWK0 134 aa18.37■□□□□ 0.53
LDB3-208ENST00000623007 TDP2O95551 362 aa18.37■□□□□ 0.53
LDB3-208ENST00000623007 SLURP2P0DP57 97 aa18.37■□□□□ 0.53
LDB3-208ENST00000623007 ECE1P42892 770 aa18.37■□□□□ 0.53
LDB3-208ENST00000623007 KCNJ6P48051 423 aa18.37■□□□□ 0.53
LDB3-208ENST00000623007 JAG1P78504 1218 aa18.37■□□□□ 0.53
LDB3-208ENST00000623007 PAK1Q13153 545 aa18.37■□□□□ 0.53
LDB3-208ENST00000623007 HYIQ5T013 277 aa18.37■□□□□ 0.53
LDB3-208ENST00000623007 CRYGNQ8WXF5 182 aa18.37■□□□□ 0.53
LDB3-208ENST00000623007 HSD3B7Q9H2F3 369 aa18.37■□□□□ 0.53
LDB3-208ENST00000623007 ATAD5Q96QE3 1844 aa18.36■□□□□ 0.53
LDB3-208ENST00000623007 PPP1R3GB7ZBB8 358 aa18.36■□□□□ 0.53
LDB3-208ENST00000623007 PSMA7O14818 248 aa18.36■□□□□ 0.53
LDB3-208ENST00000623007 ARHGAP4P98171 946 aa18.36■□□□□ 0.53
LDB3-208ENST00000623007 NOLC1Q14978 699 aaKnown RBP eCLIP18.36■□□□□ 0.53
LDB3-208ENST00000623007 SHROOM1Q2M3G4 852 aaPredicted RBP18.36■□□□□ 0.53
LDB3-208ENST00000623007 GPC2Q8N158 579 aa18.36■□□□□ 0.53
LDB3-208ENST00000623007 DHTKD1Q96HY7 919 aaPredicted RBP18.36■□□□□ 0.53
LDB3-208ENST00000623007 TEPSINQ96N21 525 aa18.36■□□□□ 0.53
LDB3-208ENST00000623007 ZNF341Q9BYN7 854 aa18.36■□□□□ 0.53
LDB3-208ENST00000623007 MAF1Q9H063 256 aa18.36■□□□□ 0.53
LDB3-208ENST00000623007 KCNMB3Q9NPA1 279 aa18.36■□□□□ 0.53
LDB3-208ENST00000623007 BMP2KQ9NSY1 1161 aaPredicted RBP18.36■□□□□ 0.53
LDB3-208ENST00000623007 BICDL2A1A5D9 508 aa18.35■□□□□ 0.53
LDB3-208ENST00000623007 PHF20L1A8MW92 1017 aa18.35■□□□□ 0.53
LDB3-208ENST00000623007 SLC37A4O43826 429 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms