RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 GMEB1Q9Y692 573 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 ZNF532Q9HCE3 1301 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 TCRBV5S4A2TA0A5A2 114 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 RBM47A0AV96 593 aaKnown RBP8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 E7EVH7 732 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 IDH1O75874 414 aaKnown RBP8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 PENKP01210 267 aaPredicted RBP8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 PDE6AP16499 860 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 ZNF18P17022 549 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 ITGA6P23229 1130 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 CCND1P24385 295 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 GUCY1A2P33402 732 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 ATP1A2P50993 1020 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 ZBED6P86452 979 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 GRIN1Q05586 938 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 MYBPC3Q14896 1274 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 IFI16Q16666 785 aaKnown RBP8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 GNPTABQ3T906 1256 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 RESP18Q5W5W9 173 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 PAPD7Q5XG87 772 aaKnown RBP8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 CNGA4Q8IV77 575 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 GSPT2Q8IYD1 628 aaKnown RBP8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 GBP7Q8N8V2 638 aaPredicted RBP8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 ZBTB38Q8NAP3 1195 aaPredicted RBP8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 ACRBPQ8NEB7 543 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 TTLL11Q8NHH1 800 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 IGDCC4Q8TDY8 1250 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 C17orf50Q8WW18 174 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 NDST4Q9H3R1 872 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 LY9Q9HBG7 655 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 SUN2Q9UH99 717 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 DACH1Q9UI36 760 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 SLIT2O94813 1529 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 ABCA3Q99758 1704 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 LRP5O75197 1615 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 GOLGA6L10A0A0M3HER8 536 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 FAM237AA0A1B0GTK4 181 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 MFAP3LO75121 409 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 KIF4AO95239 1232 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 TFRCP02786 760 aaKnown RBP8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 IL2RBP14784 551 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 GUCY1A3Q02108 690 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 LMNB2Q03252 620 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 CTDSPL2Q05D32 466 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 USP4Q13107 963 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 TRIM28Q13263 835 aaKnown RBP8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 LONRF3Q496Y0 759 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 HSP90AA4PQ58FG1 418 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 HIBCHQ6NVY1 386 aaPredicted RBP8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 LCA5Q86VQ0 697 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 PPFIBP1Q86W92 1011 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 TMTC1Q8IUR5 882 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 MMGT1Q8N4V1 131 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 CCDC63Q8NA47 563 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 LZICQ8WZA0 190 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 CCT6BQ92526 530 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 TRAPPC9Q96Q05 1148 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 SAR1BQ9Y6B6 198 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 NHSL1Q5SYE7 1610 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 CHD4Q14839 1912 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 A0A1B0GTH6 734 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 GOLGA8AA7E2F4 631 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 SNAP23O00161 211 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 PPIP5K2O43314 1243 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 PPP6R2O75170 966 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 ATP6V1G1O75348 118 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 PSMC4P43686 418 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 GNAQP50148 359 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 CTSWP56202 376 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 MXRA7P84157 204 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 SPRED3Q2MJR0 410 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 PPP1R15BQ5SWA1 713 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 NUGGCQ68CJ6 796 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 LDHAL6AQ6ZMR3 332 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 KIF6Q6ZMV9 814 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 ZNF572Q7Z3I7 529 aaPredicted RBP8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 NLRP10Q86W26 655 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 STK11IPQ8N1F8 1099 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 TMTC2Q8N394 836 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 HELBQ8NG08 1087 aaPredicted RBP8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 GDAP1L1Q96MZ0 367 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 ZIM3Q96PE6 472 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 MMS19Q96T76 1030 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 SEC31BQ9NQW1 1179 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 XIRP1Q702N8 1843 aaKnown RBP8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 TIAM2Q8IVF5 1701 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 ITIH6Q6UXX5 1313 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 MAP3K15Q6ZN16 1313 aa8.28□□□□□ -1.08
TRIM49B-202ENST00000622138 MYH3P11055 1940 aa8.27□□□□□ -1.08
TRIM49B-202ENST00000622138 ANO9A1A5B4 782 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 GMNCA6NCL1 334 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 N4BP3O15049 544 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 ZBTB43O43298 467 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 DIAPH2O60879 1101 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 PAEPP09466 180 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 DESP17661 470 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 ABL2P42684 1182 aa8.27□□□□□ -1.09
TRIM49B-202ENST00000622138 TOB1P50616 345 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms