RNA–Protein interactions for RNA: ENST00000621029.4

SEMA3B-215, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-215ENST00000621029 DYNC1LI2O43237 492 aaPredicted RBP33.78■■■■□ 3
SEMA3B-215ENST00000621029 SMPD1P17405 629 aa33.78■■■■□ 3
SEMA3B-215ENST00000621029 BEX3Q00994 111 aa33.78■■■■□ 3
SEMA3B-215ENST00000621029 TAPT1Q6NXT6 567 aa33.78■■■■□ 3
SEMA3B-215ENST00000621029 TDHQ8IZJ6 230 aa33.78■■■■□ 3
SEMA3B-215ENST00000621029 MORC4Q8TE76 937 aa33.78■■■■□ 3
SEMA3B-215ENST00000621029 CCDC136Q96JN2 1154 aa33.78■■■■□ 3
SEMA3B-215ENST00000621029 LSG1Q9H089 658 aaKnown RBP33.77■■■■□ 3
SEMA3B-215ENST00000621029 PDLIM7Q9NR12 457 aa33.77■■■■□ 3
SEMA3B-215ENST00000621029 LOC102724159A0A0B4J2E5 919 aa33.76■■■□□ 2.99
SEMA3B-215ENST00000621029 B4DLN1 442 aa33.76■■■□□ 2.99
SEMA3B-215ENST00000621029 MRPL12P52815 198 aaKnown RBP33.76■■■□□ 2.99
SEMA3B-215ENST00000621029 PWP2Q15269 919 aaKnown RBP33.76■■■□□ 2.99
SEMA3B-215ENST00000621029 MCF2L2Q86YR7 1114 aa33.76■■■□□ 2.99
SEMA3B-215ENST00000621029 RGS22Q8NE09 1264 aa33.76■■■□□ 2.99
SEMA3B-215ENST00000621029 SENP2Q9HC62 589 aa33.76■■■□□ 2.99
SEMA3B-215ENST00000621029 MAD2L2Q9UI95 211 aa33.76■■■□□ 2.99
SEMA3B-215ENST00000621029 GNEQ9Y223 722 aaKnown RBP33.76■■■□□ 2.99
SEMA3B-215ENST00000621029 MRPL11Q9Y3B7 192 aaKnown RBP33.76■■■□□ 2.99
SEMA3B-215ENST00000621029 CLTBP09497 229 aa33.75■■■□□ 2.99
SEMA3B-215ENST00000621029 SH3RF1Q7Z6J0 888 aa33.75■■■□□ 2.99
SEMA3B-215ENST00000621029 CATIPQ7Z7H3 387 aa33.75■■■□□ 2.99
SEMA3B-215ENST00000621029 DNERQ8NFT8 737 aa33.75■■■□□ 2.99
SEMA3B-215ENST00000621029 DCDC2CA8MYV0 355 aa33.74■■■□□ 2.99
SEMA3B-215ENST00000621029 PTGS1P23219 599 aa33.74■■■□□ 2.99
SEMA3B-215ENST00000621029 GRM4Q14833 912 aa33.74■■■□□ 2.99
SEMA3B-215ENST00000621029 CASC1Q6TDU7 716 aa33.74■■■□□ 2.99
SEMA3B-215ENST00000621029 AMNQ9BXJ7 453 aa33.74■■■□□ 2.99
SEMA3B-215ENST00000621029 WDR11Q9BZH6 1224 aa33.74■■■□□ 2.99
SEMA3B-215ENST00000621029 ELP1O95163 1332 aa33.74■■■□□ 2.99
SEMA3B-215ENST00000621029 PALM3A6NDB9 673 aaPredicted RBP33.73■■■□□ 2.99
SEMA3B-215ENST00000621029 ZEB2O60315 1214 aa33.73■■■□□ 2.99
SEMA3B-215ENST00000621029 FSCN1Q16658 493 aaKnown RBP33.73■■■□□ 2.99
SEMA3B-215ENST00000621029 HOMER1Q86YM7 354 aa33.73■■■□□ 2.99
SEMA3B-215ENST00000621029 MB21D2Q8IYB1 491 aaPredicted RBP33.73■■■□□ 2.99
SEMA3B-215ENST00000621029 TBC1D5Q92609 795 aa33.73■■■□□ 2.99
SEMA3B-215ENST00000621029 TRIM43BA6NCK2 446 aa33.72■■■□□ 2.99
SEMA3B-215ENST00000621029 SOX1O00570 391 aaPredicted RBP33.72■■■□□ 2.99
SEMA3B-215ENST00000621029 SLC27A2O14975 620 aa33.72■■■□□ 2.99
SEMA3B-215ENST00000621029 CTAGE5O15320 804 aa33.72■■■□□ 2.99
SEMA3B-215ENST00000621029 ANTXR2P58335 489 aa33.72■■■□□ 2.99
SEMA3B-215ENST00000621029 TMEM63BQ5T3F8 832 aa33.72■■■□□ 2.99
SEMA3B-215ENST00000621029 BADQ92934 168 aa33.72■■■□□ 2.99
SEMA3B-215ENST00000621029 TRIM43Q96BQ3 446 aaPredicted RBP33.72■■■□□ 2.99
SEMA3B-215ENST00000621029 TMEM39AQ9NV64 488 aa33.72■■■□□ 2.99
SEMA3B-215ENST00000621029 CXCL17Q6UXB2 119 aa33.71■■■□□ 2.99
SEMA3B-215ENST00000621029 LRCH3Q96II8 777 aa33.71■■■□□ 2.99
SEMA3B-215ENST00000621029 A0A0U1RQG5 324 aaPredicted RBP33.7■■■□□ 2.99
SEMA3B-215ENST00000621029 ZBTB5O15062 677 aa33.7■■■□□ 2.99
SEMA3B-215ENST00000621029 PRC1O43663 620 aa33.7■■■□□ 2.99
SEMA3B-215ENST00000621029 DUSP28Q4G0W2 176 aa33.7■■■□□ 2.99
SEMA3B-215ENST00000621029 CREB3L3Q68CJ9 461 aa33.7■■■□□ 2.99
SEMA3B-215ENST00000621029 NFXL1Q6ZNB6 911 aa33.7■■■□□ 2.99
SEMA3B-215ENST00000621029 SYTL5Q8TDW5 730 aaPredicted RBP33.7■■■□□ 2.99
SEMA3B-215ENST00000621029 IGDCC4Q8TDY8 1250 aa33.7■■■□□ 2.99
SEMA3B-215ENST00000621029 MAF1Q9H063 256 aa33.7■■■□□ 2.99
SEMA3B-215ENST00000621029 Q9Y3F1 56 aa33.7■■■□□ 2.99
SEMA3B-215ENST00000621029 LCTP09848 1927 aa33.69■■■□□ 2.98
SEMA3B-215ENST00000621029 CFBP00751 764 aa33.69■■■□□ 2.98
SEMA3B-215ENST00000621029 RAG1P15918 1043 aa33.69■■■□□ 2.98
SEMA3B-215ENST00000621029 MCM5P33992 734 aa33.69■■■□□ 2.98
SEMA3B-215ENST00000621029 NKX3-2P78367 333 aa33.69■■■□□ 2.98
SEMA3B-215ENST00000621029 ANKRD33Q7Z3H0 272 aa33.69■■■□□ 2.98
SEMA3B-215ENST00000621029 TOX2Q96NM4 488 aa33.69■■■□□ 2.98
SEMA3B-215ENST00000621029 TAAR1Q96RJ0 339 aa33.69■■■□□ 2.98
SEMA3B-215ENST00000621029 PCDHA1Q9Y5I3 950 aa33.69■■■□□ 2.98
SEMA3B-215ENST00000621029 MROH7Q68CQ1 1323 aa33.69■■■□□ 2.98
SEMA3B-215ENST00000621029 NEFLP07196 543 aa33.68■■■□□ 2.98
SEMA3B-215ENST00000621029 TROAPQ12815 778 aa33.68■■■□□ 2.98
SEMA3B-215ENST00000621029 NSUN6Q8TEA1 469 aaKnown RBP33.68■■■□□ 2.98
SEMA3B-215ENST00000621029 PIGSQ96S52 555 aa33.68■■■□□ 2.98
SEMA3B-215ENST00000621029 LRRC37A2A6NM11 1700 aa33.67■■■□□ 2.98
SEMA3B-215ENST00000621029 ARVCFO00192 962 aa33.67■■■□□ 2.98
SEMA3B-215ENST00000621029 CDC45O75419 566 aa33.67■■■□□ 2.98
SEMA3B-215ENST00000621029 CABYRO75952 493 aa33.67■■■□□ 2.98
SEMA3B-215ENST00000621029 EDNRBP24530 442 aa33.67■■■□□ 2.98
SEMA3B-215ENST00000621029 FAAP100Q0VG06 881 aa33.67■■■□□ 2.98
SEMA3B-215ENST00000621029 PPP2R5BQ15173 497 aa33.67■■■□□ 2.98
SEMA3B-215ENST00000621029 RMDN3Q96TC7 470 aa33.67■■■□□ 2.98
SEMA3B-215ENST00000621029 GPHNQ9NQX3 736 aaPredicted RBP33.67■■■□□ 2.98
SEMA3B-215ENST00000621029 TRAF1Q13077 416 aa33.66■■■□□ 2.98
SEMA3B-215ENST00000621029 LRIT3Q3SXY7 679 aa33.66■■■□□ 2.98
SEMA3B-215ENST00000621029 RNF20Q5VTR2 975 aa33.66■■■□□ 2.98
SEMA3B-215ENST00000621029 ARHGEF16Q5VV41 709 aa33.66■■■□□ 2.98
SEMA3B-215ENST00000621029 OR6J1Q8NGC5 347 aa33.66■■■□□ 2.98
SEMA3B-215ENST00000621029 CTCFLQ8NI51 663 aaPredicted RBP33.66■■■□□ 2.98
SEMA3B-215ENST00000621029 SCFD2Q8WU76 684 aa33.66■■■□□ 2.98
SEMA3B-215ENST00000621029 PIBF1Q8WXW3 757 aa33.66■■■□□ 2.98
SEMA3B-215ENST00000621029 MTMR8Q96EF0 704 aa33.66■■■□□ 2.98
SEMA3B-215ENST00000621029 LY9Q9HBG7 655 aa33.66■■■□□ 2.98
SEMA3B-215ENST00000621029 COL20A1Q9P218 1284 aa33.66■■■□□ 2.98
SEMA3B-215ENST00000621029 RBM47A0AV96 593 aaKnown RBP33.65■■■□□ 2.98
SEMA3B-215ENST00000621029 CCDC69A6NI79 296 aa33.65■■■□□ 2.98
SEMA3B-215ENST00000621029 KIAA0355O15063 1070 aa33.65■■■□□ 2.98
SEMA3B-215ENST00000621029 PPP1R11O60927 126 aaPredicted RBP33.65■■■□□ 2.98
SEMA3B-215ENST00000621029 NECTIN1Q15223 517 aa33.65■■■□□ 2.98
SEMA3B-215ENST00000621029 ZNF654Q8IZM8 581 aa33.65■■■□□ 2.98
SEMA3B-215ENST00000621029 MYL10Q9BUA6 226 aa33.65■■■□□ 2.98
SEMA3B-215ENST00000621029 RIOX1Q9H6W3 641 aa33.65■■■□□ 2.98
SEMA3B-215ENST00000621029 TLR3O15455 904 aaKnown RBP33.64■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms