RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 CCDC78A2IDD5 438 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 H0YCG3 227 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 DLL1O00548 723 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 RPSAP08865 295 aaKnown RBP7.8□□□□□ -1.16
COLCA1-205ENST00000620864 KCNQ4P56696 695 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 GJC2Q5T442 439 aaPredicted RBP7.8□□□□□ -1.16
COLCA1-205ENST00000620864 TADA2BQ86TJ2 420 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 NECAB1Q8N987 351 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 IP6K1Q92551 441 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 MTBPQ96DY7 904 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 GSDMAQ96QA5 445 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 MKNK1Q9BUB5 465 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 NT5C3AQ9H0P0 336 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 MMEP08473 750 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 POLR2BP30876 1174 aaKnown RBP7.8□□□□□ -1.16
COLCA1-205ENST00000620864 HOXC9P31274 260 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 AK2P54819 239 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 TRIM31Q9BZY9 425 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 TMEM60Q9H2L4 133 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 NUP153P49790 1475 aaKnown RBP7.79□□□□□ -1.16
COLCA1-205ENST00000620864 INHBAP08476 426 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 KRT10P13645 584 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 STAT1P42224 750 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 FLOT2Q14254 428 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 POSTNQ15063 836 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 DDX42Q86XP3 938 aaKnown RBP eCLIP7.79□□□□□ -1.16
COLCA1-205ENST00000620864 CARD10Q9BWT7 1032 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 RRAGDQ9NQL2 400 aaPredicted RBP7.79□□□□□ -1.16
COLCA1-205ENST00000620864 FBXL21Q9UKT6 434 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 KRR1Q13601 381 aaKnown RBP7.79□□□□□ -1.16
COLCA1-205ENST00000620864 GADL1Q6ZQY3 521 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 HEMK1Q9Y5R4 338 aaPredicted RBP7.79□□□□□ -1.16
COLCA1-205ENST00000620864 DAB1O75553 588 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 RETREG2Q8NC44 543 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 STMN3Q9NZ72 180 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 SEPT3Q9UH03 358 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 CDC23Q9UJX2 597 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 SESN1Q9Y6P5 492 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 BIVM-ERCC5R4GMW8 1640 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 ABCC1P33527 1531 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 HNRNPCP07910 306 aaKnown RBP eCLIP7.79□□□□□ -1.16
COLCA1-205ENST00000620864 PRPSAP1Q14558 356 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 CREB3L3Q68CJ9 461 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 KIAA2013Q8IYS2 634 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 TCP11Q8WWU5 503 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 LCMT1Q9UIC8 334 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 G3BP2Q9UN86 482 aaKnown RBP7.79□□□□□ -1.16
COLCA1-205ENST00000620864 SLC4A4Q9Y6R1 1079 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 GSTA4O15217 222 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 CUL1Q13616 776 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 HOOK2Q96ED9 719 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 VPS16Q9H269 839 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 MBIPQ9NS73 344 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 MRGBPQ9NV56 204 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 TMEM2Q9UHN6 1383 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 SKOR1P84550 965 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 DHX9Q08211 1270 aaKnown RBP7.79□□□□□ -1.16
COLCA1-205ENST00000620864 ZYXQ15942 572 aaKnown RBP7.79□□□□□ -1.16
COLCA1-205ENST00000620864 NCAPH2Q6IBW4 605 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 CEP70Q8NHQ1 597 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 UGGT1Q9NYU2 1555 aa7.79□□□□□ -1.16
COLCA1-205ENST00000620864 MRPS15P82914 257 aaKnown RBP7.78□□□□□ -1.16
COLCA1-205ENST00000620864 NLGN1Q8N2Q7 840 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 STX19Q8N4C7 294 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 TTC25Q96NG3 672 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 SH3GL2Q99962 352 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 IQCA1LA6NCM1 817 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 RNF113AO15541 343 aaKnown RBP7.78□□□□□ -1.16
COLCA1-205ENST00000620864 HNRNPRO43390 633 aaKnown RBP7.78□□□□□ -1.16
COLCA1-205ENST00000620864 FOSL2P15408 326 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 CYP7A1P22680 504 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 ADCY2Q08462 1091 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 FBXL13Q8NEE6 735 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 RUBCNQ92622 972 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 PDE11AQ9HCR9 933 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 ZNF202O95125 648 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 ABCD1P33897 745 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 ART3Q13508 389 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 DLGAP5Q15398 846 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 FSCBQ5H9T9 825 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 KRT39Q6A163 491 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 ANO5Q75V66 913 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 ENGASEQ8NFI3 743 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.78□□□□□ -1.16
COLCA1-205ENST00000620864 RIOK1Q9BRS2 568 aaKnown RBP7.78□□□□□ -1.16
COLCA1-205ENST00000620864 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.78□□□□□ -1.16
COLCA1-205ENST00000620864 TRAIPQ9BWF2 469 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 USP26Q9BXU7 913 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 PKD2L1Q9P0L9 805 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 CCPG1Q9ULG6 757 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 NFE2L3Q9Y4A8 694 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 ACTN1P12814 892 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 ATP8B2P98198 1209 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 MED21Q13503 144 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 ARHGAP44Q17R89 818 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 C8orf34Q49A92 452 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 MRPS26Q9BYN8 205 aaKnown RBP7.78□□□□□ -1.16
COLCA1-205ENST00000620864 RTEL1Q9NZ71 1219 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 CHPF2Q9P2E5 772 aa7.78□□□□□ -1.16
COLCA1-205ENST00000620864 PPP2R2CQ9Y2T4 447 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms