RNA–Protein interactions for RNA: ENST00000619117.1

C9orf50-202, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf50, Length 796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-202ENST00000619117 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.74■□□□□ 0.43
C9orf50-202ENST00000619117 A0A1W2PQ45 241 aaPredicted RBP17.74■□□□□ 0.43
C9orf50-202ENST00000619117 A0A1W2PQY0 241 aa17.74■□□□□ 0.43
C9orf50-202ENST00000619117 MYADML2A6NDP7 307 aa17.74■□□□□ 0.43
C9orf50-202ENST00000619117 MOXD2PA6NHM9 499 aa17.74■□□□□ 0.43
C9orf50-202ENST00000619117 PPP1R11O60927 126 aaPredicted RBP17.74■□□□□ 0.43
C9orf50-202ENST00000619117 TNFAIP2Q03169 654 aa17.74■□□□□ 0.43
C9orf50-202ENST00000619117 TSGA10IPQ3SY00 556 aa17.74■□□□□ 0.43
C9orf50-202ENST00000619117 MCF2L2Q86YR7 1114 aa17.74■□□□□ 0.43
C9orf50-202ENST00000619117 TMTC2Q8N394 836 aa17.74■□□□□ 0.43
C9orf50-202ENST00000619117 FERMT2Q96AC1 680 aa17.74■□□□□ 0.43
C9orf50-202ENST00000619117 MPHOSPH6Q99547 160 aaKnown RBP17.74■□□□□ 0.43
C9orf50-202ENST00000619117 GDF15Q99988 308 aa17.74■□□□□ 0.43
C9orf50-202ENST00000619117 GNEQ9Y223 722 aaKnown RBP17.74■□□□□ 0.43
C9orf50-202ENST00000619117 CTAGE5O15320 804 aa17.73■□□□□ 0.43
C9orf50-202ENST00000619117 CYTH3O43739 400 aa17.73■□□□□ 0.43
C9orf50-202ENST00000619117 C6orf222P0C671 652 aaPredicted RBP17.73■□□□□ 0.43
C9orf50-202ENST00000619117 SYN1P17600 705 aa17.73■□□□□ 0.43
C9orf50-202ENST00000619117 LIFRP42702 1097 aa17.73■□□□□ 0.43
C9orf50-202ENST00000619117 ACLYP53396 1101 aa17.73■□□□□ 0.43
C9orf50-202ENST00000619117 GHRHRQ02643 423 aa17.73■□□□□ 0.43
C9orf50-202ENST00000619117 TRAF1Q13077 416 aa17.73■□□□□ 0.43
C9orf50-202ENST00000619117 IQSEC1Q6DN90 963 aa17.73■□□□□ 0.43
C9orf50-202ENST00000619117 EEPD1Q7L9B9 569 aa17.73■□□□□ 0.43
C9orf50-202ENST00000619117 PCSK9Q8NBP7 692 aaKnown RBP17.73■□□□□ 0.43
C9orf50-202ENST00000619117 SYTL5Q8TDW5 730 aaPredicted RBP17.73■□□□□ 0.43
C9orf50-202ENST00000619117 PPP4R2Q9NY27 417 aa17.73■□□□□ 0.43
C9orf50-202ENST00000619117 RBM27Q9P2N5 1060 aaKnown RBP17.73■□□□□ 0.43
C9orf50-202ENST00000619117 A0A1W2PPC1 479 aa17.72■□□□□ 0.43
C9orf50-202ENST00000619117 B4DLN1 442 aa17.72■□□□□ 0.43
C9orf50-202ENST00000619117 OPLAHO14841 1288 aa17.72■□□□□ 0.43
C9orf50-202ENST00000619117 CENPBP07199 599 aaPredicted RBP17.72■□□□□ 0.43
C9orf50-202ENST00000619117 SMPD1P17405 629 aa17.72■□□□□ 0.43
C9orf50-202ENST00000619117 KIF5BP33176 963 aa17.72■□□□□ 0.43
C9orf50-202ENST00000619117 MRPL12P52815 198 aaKnown RBP17.72■□□□□ 0.43
C9orf50-202ENST00000619117 KCNA10Q16322 511 aa17.72■□□□□ 0.43
C9orf50-202ENST00000619117 TRIM60Q495X7 471 aa17.72■□□□□ 0.43
C9orf50-202ENST00000619117 TLK2Q86UE8 772 aa17.72■□□□□ 0.43
C9orf50-202ENST00000619117 CTCFLQ8NI51 663 aaPredicted RBP17.72■□□□□ 0.43
C9orf50-202ENST00000619117 NUP133Q8WUM0 1156 aa17.72■□□□□ 0.43
C9orf50-202ENST00000619117 MYL10Q9BUA6 226 aa17.72■□□□□ 0.43
C9orf50-202ENST00000619117 SPZ1Q9BXG8 430 aa17.72■□□□□ 0.43
C9orf50-202ENST00000619117 PDGFCQ9NRA1 345 aa17.72■□□□□ 0.43
C9orf50-202ENST00000619117 COL20A1Q9P218 1284 aa17.72■□□□□ 0.43
C9orf50-202ENST00000619117 ATP11BQ9Y2G3 1177 aa17.72■□□□□ 0.43
C9orf50-202ENST00000619117 Q9Y3F1 56 aa17.72■□□□□ 0.43
C9orf50-202ENST00000619117 TRIOBPQ9H2D6 2365 aa17.71■□□□□ 0.43
C9orf50-202ENST00000619117 RBM47A0AV96 593 aaKnown RBP17.71■□□□□ 0.43
C9orf50-202ENST00000619117 CCDC69A6NI79 296 aa17.71■□□□□ 0.43
C9orf50-202ENST00000619117 BMP8BP34820 402 aa17.71■□□□□ 0.43
C9orf50-202ENST00000619117 MAGEA10P43363 369 aaPredicted RBP17.71■□□□□ 0.43
C9orf50-202ENST00000619117 HSD17B4P51659 736 aa17.71■□□□□ 0.43
C9orf50-202ENST00000619117 IRX5P78411 483 aaPredicted RBP17.71■□□□□ 0.43
C9orf50-202ENST00000619117 PDE4DQ08499 809 aa17.71■□□□□ 0.43
C9orf50-202ENST00000619117 KRT32Q14532 448 aa17.71■□□□□ 0.43
C9orf50-202ENST00000619117 NFXL1Q6ZNB6 911 aa17.71■□□□□ 0.43
C9orf50-202ENST00000619117 NOL8Q76FK4 1167 aaKnown RBP17.71■□□□□ 0.43
C9orf50-202ENST00000619117 SGMS1Q86VZ5 419 aa17.71■□□□□ 0.43
C9orf50-202ENST00000619117 HOMER1Q86YM7 354 aa17.71■□□□□ 0.43
C9orf50-202ENST00000619117 RASEFQ8IZ41 740 aa17.71■□□□□ 0.43
C9orf50-202ENST00000619117 TBC1D5Q92609 795 aa17.71■□□□□ 0.43
C9orf50-202ENST00000619117 NEK1Q96PY6 1258 aa17.71■□□□□ 0.43
C9orf50-202ENST00000619117 PIGSQ96S52 555 aa17.71■□□□□ 0.43
C9orf50-202ENST00000619117 PCDHA1Q9Y5I3 950 aa17.71■□□□□ 0.43
C9orf50-202ENST00000619117 ELP1O95163 1332 aa17.71■□□□□ 0.42
C9orf50-202ENST00000619117 PNMA6FA0A0J9YX94 578 aa17.7■□□□□ 0.42
C9orf50-202ENST00000619117 SLC34A2O95436 690 aa17.7■□□□□ 0.42
C9orf50-202ENST00000619117 CALM1P0DP23 149 aa17.7■□□□□ 0.42
C9orf50-202ENST00000619117 CALM2P0DP24 149 aa17.7■□□□□ 0.42
C9orf50-202ENST00000619117 CALM3P0DP25 149 aa17.7■□□□□ 0.42
C9orf50-202ENST00000619117 SMARCA1P28370 1054 aa17.7■□□□□ 0.42
C9orf50-202ENST00000619117 GNAQP50148 359 aa17.7■□□□□ 0.42
C9orf50-202ENST00000619117 DUSP28Q4G0W2 176 aa17.7■□□□□ 0.42
C9orf50-202ENST00000619117 GNASQ5JWF2 1037 aa17.7■□□□□ 0.42
C9orf50-202ENST00000619117 SAMD3Q8N6K7 520 aa17.7■□□□□ 0.42
C9orf50-202ENST00000619117 NSUN6Q8TEA1 469 aaKnown RBP17.7■□□□□ 0.42
C9orf50-202ENST00000619117 KCNB2Q92953 911 aa17.7■□□□□ 0.42
C9orf50-202ENST00000619117 LZTS2Q9BRK4 669 aa17.7■□□□□ 0.42
C9orf50-202ENST00000619117 STARD7Q9NQZ5 370 aa17.7■□□□□ 0.42
C9orf50-202ENST00000619117 MAP3K20Q9NYL2 800 aaKnown RBP17.7■□□□□ 0.42
C9orf50-202ENST00000619117 CFBP00751 764 aa17.69■□□□□ 0.42
C9orf50-202ENST00000619117 ASGR1P07306 291 aa17.69■□□□□ 0.42
C9orf50-202ENST00000619117 EXOSC10Q01780 885 aaKnown RBP17.69■□□□□ 0.42
C9orf50-202ENST00000619117 FSCN1Q16658 493 aaKnown RBP17.69■□□□□ 0.42
C9orf50-202ENST00000619117 ADCK5Q3MIX3 580 aa17.69■□□□□ 0.42
C9orf50-202ENST00000619117 SCFD2Q8WU76 684 aa17.69■□□□□ 0.42
C9orf50-202ENST00000619117 GLT1D1Q96MS3 346 aa17.69■□□□□ 0.42
C9orf50-202ENST00000619117 TAAR1Q96RJ0 339 aa17.69■□□□□ 0.42
C9orf50-202ENST00000619117 IWS1Q96ST2 819 aa17.69■□□□□ 0.42
C9orf50-202ENST00000619117 LRRC2Q9BYS8 371 aa17.69■□□□□ 0.42
C9orf50-202ENST00000619117 WDR11Q9BZH6 1224 aa17.69■□□□□ 0.42
C9orf50-202ENST00000619117 AP5M1Q9H0R1 490 aa17.69■□□□□ 0.42
C9orf50-202ENST00000619117 PDLIM7Q9NR12 457 aa17.69■□□□□ 0.42
C9orf50-202ENST00000619117 DNAH12Q6ZR08 3092 aa17.69■□□□□ 0.42
C9orf50-202ENST00000619117 RANBP2P49792 3224 aaKnown RBP17.69■□□□□ 0.42
C9orf50-202ENST00000619117 REC8O95072 547 aa17.68■□□□□ 0.42
C9orf50-202ENST00000619117 FXR1P51114 621 aaKnown RBP eCLIP17.68■□□□□ 0.42
C9orf50-202ENST00000619117 BEX3Q00994 111 aa17.68■□□□□ 0.42
C9orf50-202ENST00000619117 TLE2Q04725 743 aa17.68■□□□□ 0.42
C9orf50-202ENST00000619117 TMEM63BQ5T3F8 832 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms