RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 SBF1O95248 1867 aa28.62■■■□□ 2.17
VEGFC-202ENST00000618562 PHF20L1A8MW92 1017 aa28.62■■■□□ 2.17
VEGFC-202ENST00000618562 LETM2Q2VYF4 491 aa28.62■■■□□ 2.17
VEGFC-202ENST00000618562 BTNL9Q6UXG8 535 aa28.62■■■□□ 2.17
VEGFC-202ENST00000618562 ZNF592Q92610 1267 aa28.62■■■□□ 2.17
VEGFC-202ENST00000618562 TUBB4AP04350 444 aa28.61■■■□□ 2.17
VEGFC-202ENST00000618562 CLK2P49760 499 aaKnown RBP28.61■■■□□ 2.17
VEGFC-202ENST00000618562 SYDE2Q5VT97 1194 aa28.61■■■□□ 2.17
VEGFC-202ENST00000618562 KIF18AQ8NI77 898 aa28.61■■■□□ 2.17
VEGFC-202ENST00000618562 CCP110O43303 1012 aa28.6■■■□□ 2.17
VEGFC-202ENST00000618562 SLFN14P0C7P3 912 aa28.6■■■□□ 2.17
VEGFC-202ENST00000618562 ZNF18P17022 549 aa28.6■■■□□ 2.17
VEGFC-202ENST00000618562 UBE2SQ16763 222 aa28.6■■■□□ 2.17
VEGFC-202ENST00000618562 CUL5Q93034 780 aa28.6■■■□□ 2.17
VEGFC-202ENST00000618562 CCDC94Q9BW85 323 aaPredicted RBP28.6■■■□□ 2.17
VEGFC-202ENST00000618562 CCNT1O60563 726 aaKnown RBP28.6■■■□□ 2.17
VEGFC-202ENST00000618562 ERCC5P28715 1186 aaPredicted RBP28.6■■■□□ 2.17
VEGFC-202ENST00000618562 SNAP25P60880 206 aa28.6■■■□□ 2.17
VEGFC-202ENST00000618562 IKQ13123 557 aaPredicted RBP28.6■■■□□ 2.17
VEGFC-202ENST00000618562 DHX58Q96C10 678 aa28.6■■■□□ 2.17
VEGFC-202ENST00000618562 PPP1R13BQ96KQ4 1090 aa28.6■■■□□ 2.17
VEGFC-202ENST00000618562 GOPCQ9HD26 462 aa28.6■■■□□ 2.17
VEGFC-202ENST00000618562 PCDHA1Q9Y5I3 950 aa28.6■■■□□ 2.17
VEGFC-202ENST00000618562 LAD1O00515 517 aa28.59■■■□□ 2.17
VEGFC-202ENST00000618562 LONP1P36776 959 aaKnown RBP28.59■■■□□ 2.17
VEGFC-202ENST00000618562 SH3RF1Q7Z6J0 888 aa28.59■■■□□ 2.17
VEGFC-202ENST00000618562 PSTPIP2Q9H939 334 aa28.59■■■□□ 2.17
VEGFC-202ENST00000618562 NFE2L3Q9Y4A8 694 aa28.59■■■□□ 2.17
VEGFC-202ENST00000618562 ASNSP08243 561 aa28.58■■■□□ 2.17
VEGFC-202ENST00000618562 LMNB1P20700 586 aa28.58■■■□□ 2.17
VEGFC-202ENST00000618562 NCBP1Q09161 790 aaKnown RBP28.58■■■□□ 2.17
VEGFC-202ENST00000618562 GRAMD1CQ8IYS0 662 aa28.58■■■□□ 2.17
VEGFC-202ENST00000618562 TMX1Q9H3N1 280 aa28.58■■■□□ 2.17
VEGFC-202ENST00000618562 EDIL3O43854 480 aa28.58■■■□□ 2.17
VEGFC-202ENST00000618562 MRPL12P52815 198 aaKnown RBP28.58■■■□□ 2.17
VEGFC-202ENST00000618562 FMR1Q06787 632 aaKnown RBP eCLIP28.58■■■□□ 2.17
VEGFC-202ENST00000618562 GLIS2Q9BZE0 524 aaPredicted RBP28.58■■■□□ 2.17
VEGFC-202ENST00000618562 DEFB129Q9H1M3 183 aa28.58■■■□□ 2.17
VEGFC-202ENST00000618562 PRPHP41219 470 aa28.57■■■□□ 2.16
VEGFC-202ENST00000618562 DTHD1Q6ZMT9 781 aa28.57■■■□□ 2.16
VEGFC-202ENST00000618562 CCDC84Q86UT8 332 aaPredicted RBP28.57■■■□□ 2.16
VEGFC-202ENST00000618562 PDCL2Q8N4E4 241 aa28.57■■■□□ 2.16
VEGFC-202ENST00000618562 VCPKMTQ9H867 229 aa28.57■■■□□ 2.16
VEGFC-202ENST00000618562 H7C1D1 291 aa28.57■■■□□ 2.16
VEGFC-202ENST00000618562 INTS13Q9NVM9 706 aa28.57■■■□□ 2.16
VEGFC-202ENST00000618562 PRR12Q9ULL5 1215 aa28.57■■■□□ 2.16
VEGFC-202ENST00000618562 MYH7BA7E2Y1 1941 aa28.57■■■□□ 2.16
VEGFC-202ENST00000618562 FAM83BQ5T0W9 1011 aa28.56■■■□□ 2.16
VEGFC-202ENST00000618562 AMNQ9BXJ7 453 aa28.56■■■□□ 2.16
VEGFC-202ENST00000618562 GPRC5DQ9NZD1 345 aa28.56■■■□□ 2.16
VEGFC-202ENST00000618562 STAT2P52630 851 aa28.55■■■□□ 2.16
VEGFC-202ENST00000618562 ORC2Q13416 577 aaPredicted RBP28.55■■■□□ 2.16
VEGFC-202ENST00000618562 FCHSD1Q86WN1 690 aa28.55■■■□□ 2.16
VEGFC-202ENST00000618562 PYM1Q9BRP8 204 aaKnown RBP28.55■■■□□ 2.16
VEGFC-202ENST00000618562 OR52Z1P0C646 297 aa28.55■■■□□ 2.16
VEGFC-202ENST00000618562 ZYXQ15942 572 aaKnown RBP28.55■■■□□ 2.16
VEGFC-202ENST00000618562 E2F4Q16254 413 aa28.55■■■□□ 2.16
VEGFC-202ENST00000618562 GPC2Q8N158 579 aa28.55■■■□□ 2.16
VEGFC-202ENST00000618562 TRPM4Q8TD43 1214 aa28.55■■■□□ 2.16
VEGFC-202ENST00000618562 PAGE5Q96GU1 130 aa28.55■■■□□ 2.16
VEGFC-202ENST00000618562 GSDMAQ96QA5 445 aa28.55■■■□□ 2.16
VEGFC-202ENST00000618562 CDC25AP30304 524 aa28.54■■■□□ 2.16
VEGFC-202ENST00000618562 TBX2Q13207 712 aaPredicted RBP28.54■■■□□ 2.16
VEGFC-202ENST00000618562 FBXO11Q86XK2 927 aa28.54■■■□□ 2.16
VEGFC-202ENST00000618562 SH2D4AQ9H788 454 aa28.54■■■□□ 2.16
VEGFC-202ENST00000618562 CDK11BP21127 795 aaKnown RBP28.54■■■□□ 2.16
VEGFC-202ENST00000618562 GLT8D2Q9H1C3 349 aa28.54■■■□□ 2.16
VEGFC-202ENST00000618562 USP17L15C9J2P7 530 aa28.53■■■□□ 2.16
VEGFC-202ENST00000618562 USP17L13C9JLJ4 530 aa28.53■■■□□ 2.16
VEGFC-202ENST00000618562 USP17L11C9JVI0 530 aa28.53■■■□□ 2.16
VEGFC-202ENST00000618562 USP17L18D6R9N7 530 aa28.53■■■□□ 2.16
VEGFC-202ENST00000618562 USP17L22D6RA61 530 aa28.53■■■□□ 2.16
VEGFC-202ENST00000618562 USP17L17D6RBQ6 530 aa28.53■■■□□ 2.16
VEGFC-202ENST00000618562 USP17L19D6RCP7 530 aa28.53■■■□□ 2.16
VEGFC-202ENST00000618562 USP17L20D6RJB6 530 aa28.53■■■□□ 2.16
VEGFC-202ENST00000618562 USP17L24Q0WX57 530 aa28.53■■■□□ 2.16
VEGFC-202ENST00000618562 NBPF12Q5TAG4 269 aaPredicted RBP28.53■■■□□ 2.16
VEGFC-202ENST00000618562 USP17L6PQ6QN14 398 aa28.53■■■□□ 2.16
VEGFC-202ENST00000618562 SMCHD1A6NHR9 2005 aa28.53■■■□□ 2.16
VEGFC-202ENST00000618562 DPYDQ12882 1025 aa28.52■■■□□ 2.16
VEGFC-202ENST00000618562 ANGEL2Q5VTE6 544 aaKnown RBP28.52■■■□□ 2.16
VEGFC-202ENST00000618562 POTEDQ86YR6 584 aa28.52■■■□□ 2.16
VEGFC-202ENST00000618562 PP2D1A8MPX8 630 aa28.52■■■□□ 2.16
VEGFC-202ENST00000618562 TDP2O95551 362 aa28.52■■■□□ 2.16
VEGFC-202ENST00000618562 USH1GQ495M9 461 aa28.52■■■□□ 2.16
VEGFC-202ENST00000618562 IQUBQ8NA54 791 aa28.52■■■□□ 2.16
VEGFC-202ENST00000618562 MED15Q96RN5 788 aa28.52■■■□□ 2.16
VEGFC-202ENST00000618562 TAL1P17542 331 aaPredicted RBP28.51■■■□□ 2.15
VEGFC-202ENST00000618562 SPECC1LQ69YQ0 1117 aa28.51■■■□□ 2.15
VEGFC-202ENST00000618562 TRMT44Q8IYL2 757 aaKnown RBP28.51■■■□□ 2.15
VEGFC-202ENST00000618562 ZNF341Q9BYN7 854 aa28.51■■■□□ 2.15
VEGFC-202ENST00000618562 MEIS2O14770 477 aa28.5■■■□□ 2.15
VEGFC-202ENST00000618562 SLC37A4O43826 429 aa28.5■■■□□ 2.15
VEGFC-202ENST00000618562 AFMP43652 599 aa28.5■■■□□ 2.15
VEGFC-202ENST00000618562 PDXDC2PQ6P474 469 aa28.5■■■□□ 2.15
VEGFC-202ENST00000618562 MTMR9Q96QG7 549 aa28.5■■■□□ 2.15
VEGFC-202ENST00000618562 ARHGAP6O43182 974 aa28.5■■■□□ 2.15
VEGFC-202ENST00000618562 CTNND1O60716 968 aaKnown RBP28.5■■■□□ 2.15
VEGFC-202ENST00000618562 TXLNAP40222 546 aa28.5■■■□□ 2.15
VEGFC-202ENST00000618562 EPS15P42566 896 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms