RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 VAT1LQ9HCJ6 419 aa18.61■□□□□ 0.57
BRCA1-228ENST00000618469 SPTBN5Q9NRC6 3674 aaKnown RBP18.61■□□□□ 0.57
BRCA1-228ENST00000618469 ABCB11O95342 1321 aa18.6■□□□□ 0.57
BRCA1-228ENST00000618469 PALM3A6NDB9 673 aaPredicted RBP18.6■□□□□ 0.57
BRCA1-228ENST00000618469 DNM1LO00429 736 aa18.6■□□□□ 0.57
BRCA1-228ENST00000618469 RARBP10826 455 aa18.6■□□□□ 0.57
BRCA1-228ENST00000618469 BAATQ14032 418 aaPredicted RBP18.6■□□□□ 0.57
BRCA1-228ENST00000618469 SLC39A5Q6ZMH5 540 aa18.6■□□□□ 0.57
BRCA1-228ENST00000618469 NFXL1Q6ZNB6 911 aa18.6■□□□□ 0.57
BRCA1-228ENST00000618469 TMEM87BQ96K49 555 aa18.6■□□□□ 0.57
BRCA1-228ENST00000618469 PURBQ96QR8 312 aaKnown RBP18.6■□□□□ 0.57
BRCA1-228ENST00000618469 MTA3Q9BTC8 594 aa18.6■□□□□ 0.57
BRCA1-228ENST00000618469 LRRC2Q9BYS8 371 aa18.6■□□□□ 0.57
BRCA1-228ENST00000618469 RAPGEFL1Q9UHV5 662 aa18.6■□□□□ 0.57
BRCA1-228ENST00000618469 CDH23Q9H251 3354 aa18.6■□□□□ 0.57
BRCA1-228ENST00000618469 CCDC69A6NI79 296 aa18.59■□□□□ 0.57
BRCA1-228ENST00000618469 ASB14A6NK59 587 aa18.59■□□□□ 0.57
BRCA1-228ENST00000618469 DDAH1O94760 285 aa18.59■□□□□ 0.57
BRCA1-228ENST00000618469 FOSL2P15408 326 aa18.59■□□□□ 0.57
BRCA1-228ENST00000618469 CALML3P27482 149 aa18.59■□□□□ 0.57
BRCA1-228ENST00000618469 RNF207Q6ZRF8 634 aa18.59■□□□□ 0.57
BRCA1-228ENST00000618469 FBXO11Q86XK2 927 aa18.59■□□□□ 0.57
BRCA1-228ENST00000618469 HOMER1Q86YM7 354 aa18.59■□□□□ 0.57
BRCA1-228ENST00000618469 RASEFQ8IZ41 740 aa18.59■□□□□ 0.57
BRCA1-228ENST00000618469 ABHD16BQ9H3Z7 469 aa18.59■□□□□ 0.57
BRCA1-228ENST00000618469 XPNPEP3Q9NQH7 507 aa18.59■□□□□ 0.57
BRCA1-228ENST00000618469 DDX49Q9Y6V7 483 aaKnown RBP18.59■□□□□ 0.57
BRCA1-228ENST00000618469 TRIM43BA6NCK2 446 aa18.58■□□□□ 0.56
BRCA1-228ENST00000618469 KBTBD13C9JR72 458 aa18.58■□□□□ 0.56
BRCA1-228ENST00000618469 REC8O95072 547 aa18.58■□□□□ 0.56
BRCA1-228ENST00000618469 ADCYAP1R1P41586 468 aa18.58■□□□□ 0.56
BRCA1-228ENST00000618469 ACVR2BQ13705 512 aa18.58■□□□□ 0.56
BRCA1-228ENST00000618469 KRT32Q14532 448 aa18.58■□□□□ 0.56
BRCA1-228ENST00000618469 ARRDC4Q8NCT1 418 aa18.58■□□□□ 0.56
BRCA1-228ENST00000618469 CTCFLQ8NI51 663 aaPredicted RBP18.58■□□□□ 0.56
BRCA1-228ENST00000618469 TRIM43Q96BQ3 446 aaPredicted RBP18.58■□□□□ 0.56
BRCA1-228ENST00000618469 NEK1Q96PY6 1258 aa18.58■□□□□ 0.56
BRCA1-228ENST00000618469 ADD3Q9UEY8 706 aaKnown RBP18.58■□□□□ 0.56
BRCA1-228ENST00000618469 ALDH5A1P51649 535 aaPredicted RBP18.57■□□□□ 0.56
BRCA1-228ENST00000618469 RPS6P62753 249 aaKnown RBP18.57■□□□□ 0.56
BRCA1-228ENST00000618469 SLC35G1Q2M3R5 365 aa18.57■□□□□ 0.56
BRCA1-228ENST00000618469 ADCK5Q3MIX3 580 aa18.57■□□□□ 0.56
BRCA1-228ENST00000618469 RAB11FIP4Q86YS3 637 aa18.57■□□□□ 0.56
BRCA1-228ENST00000618469 USP38Q8NB14 1042 aa18.57■□□□□ 0.56
BRCA1-228ENST00000618469 TCEANC2Q96MN5 208 aa18.57■□□□□ 0.56
BRCA1-228ENST00000618469 AMNQ9BXJ7 453 aa18.57■□□□□ 0.56
BRCA1-228ENST00000618469 KATNBL1Q9H079 304 aa18.57■□□□□ 0.56
BRCA1-228ENST00000618469 PDLIM7Q9NR12 457 aa18.57■□□□□ 0.56
BRCA1-228ENST00000618469 FAM184BQ9ULE4 1060 aa18.57■□□□□ 0.56
BRCA1-228ENST00000618469 SYNRGQ9UMZ2 1314 aa18.56■□□□□ 0.56
BRCA1-228ENST00000618469 ZBTB5O15062 677 aa18.56■□□□□ 0.56
BRCA1-228ENST00000618469 PGK1P00558 417 aa18.56■□□□□ 0.56
BRCA1-228ENST00000618469 RXRAP19793 462 aa18.56■□□□□ 0.56
BRCA1-228ENST00000618469 ITGB8P26012 769 aa18.56■□□□□ 0.56
BRCA1-228ENST00000618469 KIF5BP33176 963 aa18.56■□□□□ 0.56
BRCA1-228ENST00000618469 LIFRP42702 1097 aa18.56■□□□□ 0.56
BRCA1-228ENST00000618469 EPHB4P54760 987 aa18.56■□□□□ 0.56
BRCA1-228ENST00000618469 LRRC41Q15345 812 aa18.56■□□□□ 0.56
BRCA1-228ENST00000618469 CCDC144BQ3MJ40 725 aa18.56■□□□□ 0.56
BRCA1-228ENST00000618469 TSGA10IPQ3SY00 556 aa18.56■□□□□ 0.56
BRCA1-228ENST00000618469 FBXO16Q8IX29 292 aaPredicted RBP18.56■□□□□ 0.56
BRCA1-228ENST00000618469 MTMR8Q96EF0 704 aa18.56■□□□□ 0.56
BRCA1-228ENST00000618469 PIGSQ96S52 555 aa18.56■□□□□ 0.56
BRCA1-228ENST00000618469 MRPL11Q9Y3B7 192 aaKnown RBP18.56■□□□□ 0.56
BRCA1-228ENST00000618469 ADCY6O43306 1168 aa18.55■□□□□ 0.56
BRCA1-228ENST00000618469 CYTH3O43739 400 aa18.55■□□□□ 0.56
BRCA1-228ENST00000618469 PPP1R11O60927 126 aaPredicted RBP18.55■□□□□ 0.56
BRCA1-228ENST00000618469 HSPA4P34932 840 aa18.55■□□□□ 0.56
BRCA1-228ENST00000618469 EEPD1Q7L9B9 569 aa18.55■□□□□ 0.56
BRCA1-228ENST00000618469 MICU3Q86XE3 530 aa18.55■□□□□ 0.56
BRCA1-228ENST00000618469 TMTC2Q8N394 836 aa18.55■□□□□ 0.56
BRCA1-228ENST00000618469 PIBF1Q8WXW3 757 aa18.55■□□□□ 0.56
BRCA1-228ENST00000618469 MAP3K14Q99558 947 aa18.55■□□□□ 0.56
BRCA1-228ENST00000618469 RIOX1Q9H6W3 641 aa18.55■□□□□ 0.56
BRCA1-228ENST00000618469 SLC12A7Q9Y666 1083 aa18.55■□□□□ 0.56
BRCA1-228ENST00000618469 BAZ2BQ9UIF8 2168 aaKnown RBP18.55■□□□□ 0.56
BRCA1-228ENST00000618469 SMAD3P84022 425 aaKnown RBP18.54■□□□□ 0.56
BRCA1-228ENST00000618469 TLE2Q04725 743 aa18.54■□□□□ 0.56
BRCA1-228ENST00000618469 DHX32Q7L7V1 743 aaKnown RBP18.54■□□□□ 0.56
BRCA1-228ENST00000618469 RNF180Q86T96 592 aa18.54■□□□□ 0.56
BRCA1-228ENST00000618469 MCF2L2Q86YR7 1114 aa18.54■□□□□ 0.56
BRCA1-228ENST00000618469 PPM1EQ8WY54 764 aa18.54■□□□□ 0.56
BRCA1-228ENST00000618469 JAKMIP1Q96N16 626 aaKnown RBP18.54■□□□□ 0.56
BRCA1-228ENST00000618469 SNX14Q9Y5W7 946 aa18.54■□□□□ 0.56
BRCA1-228ENST00000618469 ADAMTS4O75173 837 aa18.53■□□□□ 0.56
BRCA1-228ENST00000618469 DUSP11O75319 330 aaKnown RBP18.53■□□□□ 0.56
BRCA1-228ENST00000618469 PLEKHA8P1O95397 391 aa18.53■□□□□ 0.56
BRCA1-228ENST00000618469 CALM1P0DP23 149 aa18.53■□□□□ 0.56
BRCA1-228ENST00000618469 CALM2P0DP24 149 aa18.53■□□□□ 0.56
BRCA1-228ENST00000618469 CALM3P0DP25 149 aa18.53■□□□□ 0.56
BRCA1-228ENST00000618469 COL9A1P20849 921 aa18.53■□□□□ 0.56
BRCA1-228ENST00000618469 GRIN2CQ14957 1233 aa18.53■□□□□ 0.56
BRCA1-228ENST00000618469 SGMS1Q86VZ5 419 aa18.53■□□□□ 0.56
BRCA1-228ENST00000618469 RGS22Q8NE09 1264 aa18.53■□□□□ 0.56
BRCA1-228ENST00000618469 MORC4Q8TE76 937 aa18.53■□□□□ 0.56
BRCA1-228ENST00000618469 RNPC3Q96LT9 517 aaKnown RBP18.53■□□□□ 0.56
BRCA1-228ENST00000618469 MPHOSPH6Q99547 160 aaKnown RBP18.53■□□□□ 0.56
BRCA1-228ENST00000618469 VTA1Q9NP79 307 aa18.53■□□□□ 0.56
BRCA1-228ENST00000618469 PCDHA1Q9Y5I3 950 aa18.53■□□□□ 0.56
BRCA1-228ENST00000618469 LOC102724159A0A0B4J2E5 919 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms