RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 ATP6V1G3Q96LB4 118 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 ITIH6Q6UXX5 1313 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 EXOC5O00471 708 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 LDHBP07195 334 aaKnown RBP11.22□□□□□ -0.61
CUL4A-212ENST00000617546 ADCY8P40145 1251 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 LIFRP42702 1097 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 DHX9Q08211 1270 aaKnown RBP11.22□□□□□ -0.61
CUL4A-212ENST00000617546 TEX2Q8IWB9 1127 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 IFNL3Q8IZI9 196 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 REXO1Q8N1G1 1221 aaKnown RBP11.22□□□□□ -0.61
CUL4A-212ENST00000617546 ZNF710Q8N1W2 664 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 TSPYL2Q9H2G4 693 aaPredicted RBP11.22□□□□□ -0.61
CUL4A-212ENST00000617546 NOVA2Q9UNW9 492 aaKnown RBP11.22□□□□□ -0.61
CUL4A-212ENST00000617546 ADD1P35611 737 aaKnown RBP11.22□□□□□ -0.61
CUL4A-212ENST00000617546 POLR2FP61218 127 aaKnown RBP11.22□□□□□ -0.61
CUL4A-212ENST00000617546 PPP2R2AP63151 447 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 IQCB1Q15051 598 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 OGFOD1Q8N543 542 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 HVCN1Q96D96 273 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 RILPQ96NA2 401 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 OLFM3Q96PB7 478 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 EPN3Q9H201 632 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 SUFUQ9UMX1 484 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 A0A1W2PQC6 194 aa11.21□□□□□ -0.61
CUL4A-212ENST00000617546 EIF3HO15372 352 aaKnown RBP eCLIP11.21□□□□□ -0.61
CUL4A-212ENST00000617546 KRT5P13647 590 aa11.21□□□□□ -0.61
CUL4A-212ENST00000617546 SLFN12Q8IYM2 578 aa11.21□□□□□ -0.61
CUL4A-212ENST00000617546 NLRP3Q96P20 1036 aa11.21□□□□□ -0.61
CUL4A-212ENST00000617546 FMO2Q99518 471 aa11.21□□□□□ -0.61
CUL4A-212ENST00000617546 USP27XA6NNY8 438 aa11.21□□□□□ -0.61
CUL4A-212ENST00000617546 ELF1P32519 619 aa11.21□□□□□ -0.61
CUL4A-212ENST00000617546 LRRC63Q05C16 580 aa11.21□□□□□ -0.61
CUL4A-212ENST00000617546 ARMCX5Q6P1M9 558 aa11.21□□□□□ -0.61
CUL4A-212ENST00000617546 DRC3Q9H069 523 aa11.21□□□□□ -0.61
CUL4A-212ENST00000617546 ZMYND12Q9H0C1 365 aa11.21□□□□□ -0.61
CUL4A-212ENST00000617546 SAMSN1Q9NSI8 373 aaKnown RBP11.21□□□□□ -0.61
CUL4A-212ENST00000617546 PLAAQ9Y263 795 aa11.21□□□□□ -0.61
CUL4A-212ENST00000617546 RASSF10A6NK89 507 aa11.21□□□□□ -0.62
CUL4A-212ENST00000617546 RASGRF2O14827 1237 aa11.21□□□□□ -0.62
CUL4A-212ENST00000617546 H2AFXP16104 143 aaPredicted RBP11.21□□□□□ -0.62
CUL4A-212ENST00000617546 CTDSPL2Q05D32 466 aa11.21□□□□□ -0.62
CUL4A-212ENST00000617546 PTGDRQ13258 359 aa11.21□□□□□ -0.62
CUL4A-212ENST00000617546 ARID5BQ14865 1188 aa11.21□□□□□ -0.62
CUL4A-212ENST00000617546 CNPY4Q8N129 248 aa11.21□□□□□ -0.62
CUL4A-212ENST00000617546 PAGE5Q96GU1 130 aa11.21□□□□□ -0.62
CUL4A-212ENST00000617546 PCDHB13Q9Y5F0 798 aa11.21□□□□□ -0.62
CUL4A-212ENST00000617546 ADCY10Q96PN6 1610 aa11.21□□□□□ -0.62
CUL4A-212ENST00000617546 LGALS16A8MUM7 142 aa11.21□□□□□ -0.62
CUL4A-212ENST00000617546 KRT31Q15323 416 aa11.21□□□□□ -0.62
CUL4A-212ENST00000617546 NEK8Q86SG6 692 aa11.21□□□□□ -0.62
CUL4A-212ENST00000617546 PALM2Q8IXS6 379 aa11.21□□□□□ -0.62
CUL4A-212ENST00000617546 FNBP1Q96RU3 617 aa11.21□□□□□ -0.62
CUL4A-212ENST00000617546 OSBPL9Q96SU4 736 aa11.21□□□□□ -0.62
CUL4A-212ENST00000617546 EDEM3Q9BZQ6 932 aa11.21□□□□□ -0.62
CUL4A-212ENST00000617546 PRDM4Q9UKN5 801 aa11.21□□□□□ -0.62
CUL4A-212ENST00000617546 FRMD3A2A2Y4 597 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 PABPN1LA6NDY0 278 aaKnown RBP11.2□□□□□ -0.62
CUL4A-212ENST00000617546 GCFC2P16383 781 aaKnown RBP11.2□□□□□ -0.62
CUL4A-212ENST00000617546 COG7P83436 770 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 CAV1Q03135 178 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 PDCLQ13371 301 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 TOB2Q14106 344 aaPredicted RBP11.2□□□□□ -0.62
CUL4A-212ENST00000617546 CAPRIN2Q6IMN6 1127 aaKnown RBP11.2□□□□□ -0.62
CUL4A-212ENST00000617546 PPP4R3CPQ6ZMV5 832 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 CCDC89Q8N998 374 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 SSX2IPQ9Y2D8 614 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 SH2B2O14492 632 aaPredicted RBP11.2□□□□□ -0.62
CUL4A-212ENST00000617546 KIF11P52732 1056 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 E4F1Q66K89 784 aaPredicted RBP11.2□□□□□ -0.62
CUL4A-212ENST00000617546 MYL10Q9BUA6 226 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 MIS12Q9H081 205 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 RAB20Q9NX57 234 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 MYO5CQ9NQX4 1742 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 ATP1A3P13637 1013 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 PTPREP23469 700 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 YWHAEP62258 255 aaKnown RBP11.2□□□□□ -0.62
CUL4A-212ENST00000617546 NBPF20Q3BBV1 942 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 TMEM60Q9H2L4 133 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 KIF1BO60333 1816 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 ARHGAP42A6NI28 874 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 DYMQ7RTS9 669 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 PANK4Q9NVE7 773 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 USP42Q9H9J4 1324 aaKnown RBP11.2□□□□□ -0.62
CUL4A-212ENST00000617546 FOXP2O15409 715 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 CNGA1P29973 690 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 PDCD2Q16342 344 aaPredicted RBP11.2□□□□□ -0.62
CUL4A-212ENST00000617546 FAM26FQ5R3K3 315 aa11.2□□□□□ -0.62
CUL4A-212ENST00000617546 EXOC3O60645 756 aa11.19□□□□□ -0.62
CUL4A-212ENST00000617546 MOCS3O95396 460 aa11.19□□□□□ -0.62
CUL4A-212ENST00000617546 ECEL1O95672 775 aa11.19□□□□□ -0.62
CUL4A-212ENST00000617546 ESRRGP62508 458 aa11.19□□□□□ -0.62
CUL4A-212ENST00000617546 FKBP3Q00688 224 aaKnown RBP11.19□□□□□ -0.62
CUL4A-212ENST00000617546 EXOC3L4Q17RC7 722 aa11.19□□□□□ -0.62
CUL4A-212ENST00000617546 SLC17A8Q8NDX2 589 aa11.19□□□□□ -0.62
CUL4A-212ENST00000617546 KLHDC4Q8TBB5 520 aa11.19□□□□□ -0.62
CUL4A-212ENST00000617546 NLRP7Q8WX94 980 aa11.19□□□□□ -0.62
CUL4A-212ENST00000617546 COMMD10Q9Y6G5 202 aa11.19□□□□□ -0.62
CUL4A-212ENST00000617546 GOLGA8FQ08AF8 430 aa11.19□□□□□ -0.62
CUL4A-212ENST00000617546 GOLGA8DPQ0D2H9 430 aa11.19□□□□□ -0.62
CUL4A-212ENST00000617546 PLEKHA4Q9H4M7 779 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms