RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	RBM41	Q96IZ5	413 aa	Known RBP	12.8	□□□□□ -0.36
TP53-222	ENST00000617185	ATP6V1G3	Q96LB4	118 aa		12.8	□□□□□ -0.36
TP53-222	ENST00000617185	PLA2G12B	Q9BX93	195 aa		12.8	□□□□□ -0.36
TP53-222	ENST00000617185	PPIP5K2	O43314	1243 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	DIAPH2	O60879	1101 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	ATP2C2	O75185	946 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	BCAM	P50895	628 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	IQCK	Q8N0W5	287 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	VGLL2	Q8N8G2	317 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	C8orf76	Q96K31	380 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	SENP2	Q9HC62	589 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	GOPC	Q9HD26	462 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	ABHD10	Q9NUJ1	306 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	DMGDH	Q9UI17	866 aa	Known RBP	12.79	□□□□□ -0.36
TP53-222	ENST00000617185	MAN1B1	Q9UKM7	699 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	ZNF232	Q9UNY5	417 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	ITIH6	Q6UXX5	1313 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	GOLGA6L10	A6NI86	522 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	ZNF233	A6NK53	670 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	STXBP3	O00186	592 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	PDE2A	O00408	941 aa	Predicted RBP	12.79	□□□□□ -0.36
TP53-222	ENST00000617185	CAMTA2	O94983	1202 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	ITIH3	Q06033	890 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	USP4	Q13107	963 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	ITGB3BP	Q13352	177 aa	Predicted RBP	12.79	□□□□□ -0.36
TP53-222	ENST00000617185	CUL3	Q13618	768 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	SHC4	Q6S5L8	630 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	APTX	Q7Z2E3	356 aa	Known RBP	12.79	□□□□□ -0.36
TP53-222	ENST00000617185	TEX9	Q8N6V9	391 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	CCDC63	Q8NA47	563 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	DSCC1	Q9BVC3	393 aa		12.79	□□□□□ -0.36
TP53-222	ENST00000617185	NUP98	P52948	1817 aa		12.78	□□□□□ -0.36
TP53-222	ENST00000617185	LRP6	O75581	1613 aa		12.78	□□□□□ -0.36
TP53-222	ENST00000617185	ANO9	A1A5B4	782 aa		12.78	□□□□□ -0.36
TP53-222	ENST00000617185	C5orf60	A6NFR6	353 aa		12.78	□□□□□ -0.36
TP53-222	ENST00000617185	PPP6R2	O75170	966 aa		12.78	□□□□□ -0.36
TP53-222	ENST00000617185	ECEL1	O95672	775 aa		12.78	□□□□□ -0.36
TP53-222	ENST00000617185	TNFRSF8	P28908	595 aa		12.78	□□□□□ -0.36
TP53-222	ENST00000617185	LONRF3	Q496Y0	759 aa		12.78	□□□□□ -0.36
TP53-222	ENST00000617185	HINFP	Q9BQA5	517 aa		12.78	□□□□□ -0.36
TP53-222	ENST00000617185	LRRC1	Q9BTT6	524 aa		12.78	□□□□□ -0.36
TP53-222	ENST00000617185	TRIM10	Q9UDY6	481 aa		12.78	□□□□□ -0.36
TP53-222	ENST00000617185	ADD3	Q9UEY8	706 aa	Known RBP	12.78	□□□□□ -0.36
TP53-222	ENST00000617185	SPATA31A5	Q5VU36	1347 aa		12.78	□□□□□ -0.36
TP53-222	ENST00000617185	SPATA31A7	Q8IWB4	1347 aa		12.78	□□□□□ -0.36
TP53-222	ENST00000617185	ZNF532	Q9HCE3	1301 aa		12.78	□□□□□ -0.36
TP53-222	ENST00000617185	RASSF10	A6NK89	507 aa		12.78	□□□□□ -0.36
TP53-222	ENST00000617185	UBAP1L	F5GYI3	381 aa		12.78	□□□□□ -0.36
TP53-222	ENST00000617185	TRAPPC3	O43617	180 aa		12.78	□□□□□ -0.36
TP53-222	ENST00000617185	CLTA	P09496	248 aa		12.78	□□□□□ -0.36
TP53-222	ENST00000617185	ERCC5	P28715	1186 aa	Predicted RBP	12.78	□□□□□ -0.36
TP53-222	ENST00000617185	CCDC96	Q2M329	555 aa		12.78	□□□□□ -0.36
TP53-222	ENST00000617185	RESP18	Q5W5W9	173 aa		12.78	□□□□□ -0.36
TP53-222	ENST00000617185	OSBPL1A	Q9BXW6	950 aa		12.78	□□□□□ -0.36
TP53-222	ENST00000617185	EPN1	Q9Y6I3	576 aa	Predicted RBP	12.78	□□□□□ -0.36
TP53-222	ENST00000617185	MYO5A	Q9Y4I1	1855 aa	Known RBP	12.77	□□□□□ -0.36
TP53-222	ENST00000617185	NDUFA10	O95299	355 aa		12.77	□□□□□ -0.36
TP53-222	ENST00000617185	FDPS	P14324	419 aa	Known RBP	12.77	□□□□□ -0.36
TP53-222	ENST00000617185	RRP12	Q5JTH9	1297 aa	Known RBP	12.77	□□□□□ -0.36
TP53-222	ENST00000617185	GKAP1	Q5VSY0	366 aa	Predicted RBP	12.77	□□□□□ -0.36
TP53-222	ENST00000617185	PNMA8A	Q86V59	439 aa	Predicted RBP	12.77	□□□□□ -0.36
TP53-222	ENST00000617185	TRIML1	Q8N9V2	468 aa		12.77	□□□□□ -0.36
TP53-222	ENST00000617185	LINC00116	Q8NCU8	138 aa		12.77	□□□□□ -0.36
TP53-222	ENST00000617185	ATL2	Q8NHH9	583 aa		12.77	□□□□□ -0.36
TP53-222	ENST00000617185	AGAP11	Q8TF27	550 aa		12.77	□□□□□ -0.36
TP53-222	ENST00000617185	HDAC7	Q8WUI4	952 aa		12.77	□□□□□ -0.36
TP53-222	ENST00000617185	DTNBP1	Q96EV8	351 aa		12.77	□□□□□ -0.36
TP53-222	ENST00000617185	ZNF274	Q96GC6	653 aa	Predicted RBP	12.77	□□□□□ -0.36
TP53-222	ENST00000617185	CCDC43	Q96MW1	224 aa	Known RBP	12.77	□□□□□ -0.36
TP53-222	ENST00000617185	MOV10L1	Q9BXT6	1211 aa	Known RBP	12.77	□□□□□ -0.36
TP53-222	ENST00000617185	STIM2	Q9P246	746 aa		12.77	□□□□□ -0.36
TP53-222	ENST00000617185	SRP68	Q9UHB9	627 aa	Known RBP	12.77	□□□□□ -0.36
TP53-222	ENST00000617185	MYH14	Q7Z406	1995 aa	Known RBP	12.77	□□□□□ -0.37
TP53-222	ENST00000617185	LRRD1	A4D1F6	860 aa		12.77	□□□□□ -0.37
TP53-222	ENST00000617185	CFAP73	A6NFT4	308 aa		12.77	□□□□□ -0.37
TP53-222	ENST00000617185	GSTA1	P08263	222 aa		12.77	□□□□□ -0.37
TP53-222	ENST00000617185	TPP2	P29144	1249 aa	Predicted RBP	12.77	□□□□□ -0.37
TP53-222	ENST00000617185	KIF5B	P33176	963 aa		12.77	□□□□□ -0.37
TP53-222	ENST00000617185	VAV2	P52735	878 aa		12.77	□□□□□ -0.37
TP53-222	ENST00000617185	RASGRF1	Q13972	1273 aa		12.77	□□□□□ -0.37
TP53-222	ENST00000617185	CCDC122	Q5T0U0	273 aa		12.77	□□□□□ -0.37
TP53-222	ENST00000617185	MYLK4	Q86YV6	388 aa	Predicted RBP	12.77	□□□□□ -0.37
TP53-222	ENST00000617185	MIGA1	Q8NAN2	632 aa		12.77	□□□□□ -0.37
TP53-222	ENST00000617185	APPBP2	Q92624	585 aa		12.77	□□□□□ -0.37
TP53-222	ENST00000617185	AGXT2	Q9BYV1	514 aa		12.77	□□□□□ -0.37
TP53-222	ENST00000617185	NDST4	Q9H3R1	872 aa		12.77	□□□□□ -0.37
TP53-222	ENST00000617185	ERVV-1	B6SEH8	477 aa		12.76	□□□□□ -0.37
TP53-222	ENST00000617185	ZNF185	O15231	689 aa		12.76	□□□□□ -0.37
TP53-222	ENST00000617185	MAFG	O15525	162 aa		12.76	□□□□□ -0.37
TP53-222	ENST00000617185	CCND1	P24385	295 aa		12.76	□□□□□ -0.37
TP53-222	ENST00000617185	CNGA1	P29973	690 aa		12.76	□□□□□ -0.37
TP53-222	ENST00000617185	PLCD1	P51178	756 aa		12.76	□□□□□ -0.37
TP53-222	ENST00000617185	MDM2	Q00987	491 aa	Predicted RBP	12.76	□□□□□ -0.37
TP53-222	ENST00000617185	EZH2	Q15910	746 aa	Known RBP	12.76	□□□□□ -0.37
TP53-222	ENST00000617185	QPCT	Q16769	361 aa		12.76	□□□□□ -0.37
TP53-222	ENST00000617185	ERFE	Q4G0M1	354 aa		12.76	□□□□□ -0.37
TP53-222	ENST00000617185	NT5DC1	Q5TFE4	455 aa		12.76	□□□□□ -0.37
TP53-222	ENST00000617185	MAATS1	Q7Z4T9	603 aa		12.76	□□□□□ -0.37
TP53-222	ENST00000617185	AMIGO3	Q86WK7	504 aa		12.76	□□□□□ -0.37
TP53-222	ENST00000617185	MAGEB6	Q8N7X4	407 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms