RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 YDJCA8MPS7 323 aa12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 CCNT1O60563 726 aaKnown RBP12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 URI1O94763 535 aaPredicted RBP12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 NAALADL2Q58DX5 795 aa12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 HHIPL2Q6UWX4 724 aa12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 ZSCAN29Q8IWY8 852 aaPredicted RBP12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 IQUBQ8NA54 791 aa12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 DAGLBQ8NCG7 672 aa12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 UIMC1Q96RL1 719 aa12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 PSD3Q9NYI0 1048 aa12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 PLIN4Q96Q06 1357 aa12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 C10orf71Q711Q0 1435 aa12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 TADA3O75528 432 aa12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 TTLL1O95922 423 aa12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 ZNF18P17022 549 aa12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 TAL1P17542 331 aaPredicted RBP12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 PIAS4Q8N2W9 510 aaPredicted RBP12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 MLKLQ8NB16 471 aa12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 TBCKQ8TEA7 893 aa12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 ZDHHC15Q96MV8 337 aa12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 RIOX1Q9H6W3 641 aa12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 TDRD3Q9H7E2 651 aaKnown RBP12.82□□□□□ -0.36
PCDHGA9-202ENST00000616887 H3BQF6 201 aa12.81□□□□□ -0.36
PCDHGA9-202ENST00000616887 GDF11O95390 407 aa12.81□□□□□ -0.36
PCDHGA9-202ENST00000616887 UBE2SQ16763 222 aa12.81□□□□□ -0.36
PCDHGA9-202ENST00000616887 CCDC96Q2M329 555 aa12.81□□□□□ -0.36
PCDHGA9-202ENST00000616887 KANK3Q6NY19 840 aa12.81□□□□□ -0.36
PCDHGA9-202ENST00000616887 EDIL3O43854 480 aa12.81□□□□□ -0.36
PCDHGA9-202ENST00000616887 IVLP07476 585 aa12.81□□□□□ -0.36
PCDHGA9-202ENST00000616887 SNHG28P0DPA3 235 aa12.81□□□□□ -0.36
PCDHGA9-202ENST00000616887 NT5C2P49902 561 aa12.81□□□□□ -0.36
PCDHGA9-202ENST00000616887 STRIP1Q5VSL9 837 aa12.81□□□□□ -0.36
PCDHGA9-202ENST00000616887 DTHD1Q6ZMT9 781 aa12.81□□□□□ -0.36
PCDHGA9-202ENST00000616887 POTEDQ86YR6 584 aa12.81□□□□□ -0.36
PCDHGA9-202ENST00000616887 ADGRF4Q8IZF3 695 aa12.81□□□□□ -0.36
PCDHGA9-202ENST00000616887 RASSF8Q8NHQ8 419 aa12.81□□□□□ -0.36
PCDHGA9-202ENST00000616887 C7orf43Q8WVR3 580 aa12.81□□□□□ -0.36
PCDHGA9-202ENST00000616887 GJA10Q969M2 543 aa12.81□□□□□ -0.36
PCDHGA9-202ENST00000616887 LZTS2Q9BRK4 669 aa12.81□□□□□ -0.36
PCDHGA9-202ENST00000616887 JMJD4Q9H9V9 463 aa12.81□□□□□ -0.36
PCDHGA9-202ENST00000616887 CTNND2Q9UQB3 1225 aa12.81□□□□□ -0.36
PCDHGA9-202ENST00000616887 GDAQ9Y2T3 454 aa12.81□□□□□ -0.36
PCDHGA9-202ENST00000616887 EFCAB8A8MWE9 144 aa12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 PPP1R3GB7ZBB8 358 aa12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 USP17L10C9JJH3 530 aa12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 HLA-DOAP06340 250 aa12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 GSDMDP57764 484 aa12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 ETF1P62495 437 aaKnown RBP12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 JAG1P78504 1218 aa12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 FHDC1Q9C0D6 1143 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 CXorf56Q9H5V9 222 aa12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 ARFGAP3Q9NP61 516 aa12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 KIF13BQ9NQT8 1826 aa12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 SYNRGQ9UMZ2 1314 aa12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 TDP2O95551 362 aa12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 SFPQP23246 707 aaKnown RBP eCLIP12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 STAT6P42226 847 aa12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 SNAP25P60880 206 aa12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 ZNF543Q08ER8 600 aa12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 NONOQ15233 471 aaKnown RBP eCLIP12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 SOGA3Q5TF21 947 aa12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 ARL6IP4Q66PJ3 421 aaKnown RBP12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 REXO1Q8N1G1 1221 aaKnown RBP12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 TRIML1Q8N9V2 468 aa12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 SUPT20HQ8NEM7 779 aa12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 ENOX1Q8TC92 643 aaKnown RBP12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 FUT8Q9BYC5 575 aa12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 C6orf50Q9HD87 102 aa12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 DISC1Q9NRI5 854 aa12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 VPS18Q9P253 973 aa12.8□□□□□ -0.36
PCDHGA9-202ENST00000616887 PPIP5K2O43314 1243 aa12.79□□□□□ -0.36
PCDHGA9-202ENST00000616887 SLC37A4O43826 429 aa12.79□□□□□ -0.36
PCDHGA9-202ENST00000616887 TPM1P09493 284 aa12.79□□□□□ -0.36
PCDHGA9-202ENST00000616887 LONP1P36776 959 aaKnown RBP12.79□□□□□ -0.36
PCDHGA9-202ENST00000616887 VSTM4Q8IW00 320 aa12.79□□□□□ -0.36
PCDHGA9-202ENST00000616887 PPM1EQ8WY54 764 aa12.79□□□□□ -0.36
PCDHGA9-202ENST00000616887 PRMT6Q96LA8 375 aaPredicted RBP12.79□□□□□ -0.36
PCDHGA9-202ENST00000616887 NUP88Q99567 741 aaPredicted RBP12.79□□□□□ -0.36
PCDHGA9-202ENST00000616887 TEX33O43247 280 aa12.79□□□□□ -0.36
PCDHGA9-202ENST00000616887 EEF2P13639 858 aaKnown RBP12.79□□□□□ -0.36
PCDHGA9-202ENST00000616887 TECP42680 631 aa12.79□□□□□ -0.36
PCDHGA9-202ENST00000616887 RRP1BQ14684 758 aaKnown RBP12.79□□□□□ -0.36
PCDHGA9-202ENST00000616887 SEPT2Q15019 361 aa12.79□□□□□ -0.36
PCDHGA9-202ENST00000616887 CCDC91Q7Z6B0 441 aa12.79□□□□□ -0.36
PCDHGA9-202ENST00000616887 NEK8Q86SG6 692 aa12.79□□□□□ -0.36
PCDHGA9-202ENST00000616887 IMPACTQ9P2X3 320 aa12.79□□□□□ -0.36
PCDHGA9-202ENST00000616887 SWAP70Q9UH65 585 aa12.79□□□□□ -0.36
PCDHGA9-202ENST00000616887 SIPA1L1O43166 1804 aa12.79□□□□□ -0.36
PCDHGA9-202ENST00000616887 RAD17O75943 681 aa12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 TNNI2P48788 182 aa12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 ASPRV1Q53RT3 343 aa12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 RRAGBQ5VZM2 374 aa12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 CDAN1Q8IWY9 1227 aa12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 EEF2KMTQ96G04 330 aa12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 GSDMAQ96QA5 445 aa12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 SCAF8Q9UPN6 1271 aaKnown RBP12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 ZBTB12Q9Y330 459 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 CD2APQ9Y5K6 639 aa12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 CLRN2A0PK11 232 aa12.78□□□□□ -0.36
PCDHGA9-202ENST00000616887 FANCGO15287 622 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms