RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 UNC5CLQ8IV45 518 aa19.39■□□□□ 0.69
ATXN2-227ENST00000616825 NT5C1BQ96P26 610 aa19.39■□□□□ 0.69
ATXN2-227ENST00000616825 ZNF148Q9UQR1 794 aa19.39■□□□□ 0.69
ATXN2-227ENST00000616825 FAM135BQ49AJ0 1406 aa19.39■□□□□ 0.69
ATXN2-227ENST00000616825 QTRT2Q9H974 415 aaKnown RBP19.39■□□□□ 0.69
ATXN2-227ENST00000616825 KIF11P52732 1056 aa19.38■□□□□ 0.69
ATXN2-227ENST00000616825 FKBP3Q00688 224 aaKnown RBP19.38■□□□□ 0.69
ATXN2-227ENST00000616825 TSNAXIP1Q2TAA8 658 aa19.38■□□□□ 0.69
ATXN2-227ENST00000616825 MAP7D3Q8IWC1 876 aa19.38■□□□□ 0.69
ATXN2-227ENST00000616825 VCXQ9H320 206 aa19.38■□□□□ 0.69
ATXN2-227ENST00000616825 TLR7Q9NYK1 1049 aaKnown RBP19.38■□□□□ 0.69
ATXN2-227ENST00000616825 NR2F2P24468 414 aa19.38■□□□□ 0.69
ATXN2-227ENST00000616825 SEC31BQ9NQW1 1179 aa19.38■□□□□ 0.69
ATXN2-227ENST00000616825 SORBS3O60504 671 aa19.38■□□□□ 0.69
ATXN2-227ENST00000616825 PPP6R2O75170 966 aa19.38■□□□□ 0.69
ATXN2-227ENST00000616825 ZNF710Q8N1W2 664 aa19.38■□□□□ 0.69
ATXN2-227ENST00000616825 TYW1Q9NV66 732 aaKnown RBP19.38■□□□□ 0.69
ATXN2-227ENST00000616825 POLR3EQ9NVU0 708 aa19.38■□□□□ 0.69
ATXN2-227ENST00000616825 ANKFY1Q9P2R3 1169 aa19.38■□□□□ 0.69
ATXN2-227ENST00000616825 BFSP1Q12934 665 aa19.37■□□□□ 0.69
ATXN2-227ENST00000616825 TFDP1Q14186 410 aa19.37■□□□□ 0.69
ATXN2-227ENST00000616825 SLC17A8Q8NDX2 589 aa19.37■□□□□ 0.69
ATXN2-227ENST00000616825 PLEKHF1Q96S99 279 aa19.37■□□□□ 0.69
ATXN2-227ENST00000616825 PPEF1O14829 653 aaPredicted RBP19.37■□□□□ 0.69
ATXN2-227ENST00000616825 TRIM37O94972 964 aa19.37■□□□□ 0.69
ATXN2-227ENST00000616825 ADD2P35612 726 aa19.37■□□□□ 0.69
ATXN2-227ENST00000616825 CUL4BQ13620 913 aa19.37■□□□□ 0.69
ATXN2-227ENST00000616825 DPP9Q86TI2 863 aa19.37■□□□□ 0.69
ATXN2-227ENST00000616825 MGARPQ8TDB4 240 aa19.37■□□□□ 0.69
ATXN2-227ENST00000616825 CNOT6LQ96LI5 555 aaKnown RBP19.37■□□□□ 0.69
ATXN2-227ENST00000616825 BCAP29Q9UHQ4 241 aa19.37■□□□□ 0.69
ATXN2-227ENST00000616825 SF3A3Q12874 501 aaKnown RBP eCLIP19.37■□□□□ 0.69
ATXN2-227ENST00000616825 PTPROQ16827 1216 aa19.37■□□□□ 0.69
ATXN2-227ENST00000616825 SUPT20HL1Q3ZLR7 823 aa19.37■□□□□ 0.69
ATXN2-227ENST00000616825 KMT5BQ4FZB7 885 aa19.37■□□□□ 0.69
ATXN2-227ENST00000616825 LRRC8AQ8IWT6 810 aa19.37■□□□□ 0.69
ATXN2-227ENST00000616825 DHTKD1Q96HY7 919 aaPredicted RBP19.37■□□□□ 0.69
ATXN2-227ENST00000616825 PCDHA4Q9UN74 947 aa19.37■□□□□ 0.69
ATXN2-227ENST00000616825 IFNAR1P17181 557 aa19.37■□□□□ 0.69
ATXN2-227ENST00000616825 GBP1P32455 592 aa19.37■□□□□ 0.69
ATXN2-227ENST00000616825 IGBP1P78318 339 aa19.37■□□□□ 0.69
ATXN2-227ENST00000616825 MUM1L1Q5H9M0 696 aa19.37■□□□□ 0.69
ATXN2-227ENST00000616825 NSUN7Q8NE18 718 aaKnown RBP19.37■□□□□ 0.69
ATXN2-227ENST00000616825 FAM71BQ8TC56 605 aa19.37■□□□□ 0.69
ATXN2-227ENST00000616825 DPH5Q9H2P9 285 aa19.37■□□□□ 0.69
ATXN2-227ENST00000616825 ADD3Q9UEY8 706 aaKnown RBP19.37■□□□□ 0.69
ATXN2-227ENST00000616825 ZNF215Q9UL58 517 aaPredicted RBP19.37■□□□□ 0.69
ATXN2-227ENST00000616825 WDR17Q8IZU2 1322 aa19.36■□□□□ 0.69
ATXN2-227ENST00000616825 EEF1GP26641 437 aaKnown RBP19.36■□□□□ 0.69
ATXN2-227ENST00000616825 ARHGAP4P98171 946 aa19.36■□□□□ 0.69
ATXN2-227ENST00000616825 MAP7Q14244 749 aa19.36■□□□□ 0.69
ATXN2-227ENST00000616825 NLRP10Q86W26 655 aa19.36■□□□□ 0.69
ATXN2-227ENST00000616825 TSC1Q92574 1164 aa19.36■□□□□ 0.69
ATXN2-227ENST00000616825 PLXNC1O60486 1568 aa19.36■□□□□ 0.69
ATXN2-227ENST00000616825 EXOC8Q8IYI6 725 aa19.36■□□□□ 0.69
ATXN2-227ENST00000616825 CDHR1Q96JP9 859 aa19.36■□□□□ 0.69
ATXN2-227ENST00000616825 DHX36Q9H2U1 1008 aaKnown RBP19.36■□□□□ 0.69
ATXN2-227ENST00000616825 ANTXR1Q9H6X2 564 aa19.36■□□□□ 0.69
ATXN2-227ENST00000616825 BBOF1Q8ND07 529 aa19.36■□□□□ 0.69
ATXN2-227ENST00000616825 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.36■□□□□ 0.69
ATXN2-227ENST00000616825 PPP4R1Q8TF05 950 aa19.36■□□□□ 0.69
ATXN2-227ENST00000616825 RPS6KC1Q96S38 1066 aa19.36■□□□□ 0.69
ATXN2-227ENST00000616825 ZNF577Q9BSK1 485 aa19.36■□□□□ 0.69
ATXN2-227ENST00000616825 EFCAB8A8MWE9 144 aa19.35■□□□□ 0.69
ATXN2-227ENST00000616825 INO80B-WBP1J3KQ70 363 aa19.35■□□□□ 0.69
ATXN2-227ENST00000616825 OATP04181 439 aa19.35■□□□□ 0.69
ATXN2-227ENST00000616825 BMP3P12645 472 aa19.35■□□□□ 0.69
ATXN2-227ENST00000616825 GAP43P17677 238 aa19.35■□□□□ 0.69
ATXN2-227ENST00000616825 DYNLL1P63167 89 aaKnown RBP19.35■□□□□ 0.69
ATXN2-227ENST00000616825 EHHADHQ08426 723 aa19.35■□□□□ 0.69
ATXN2-227ENST00000616825 SEPT14Q6ZU15 432 aa19.35■□□□□ 0.69
ATXN2-227ENST00000616825 ADAT2Q7Z6V5 191 aaKnown RBP19.35■□□□□ 0.69
ATXN2-227ENST00000616825 INO80BQ9C086 356 aaPredicted RBP19.35■□□□□ 0.69
ATXN2-227ENST00000616825 KLHL14Q9P2G3 628 aa19.35■□□□□ 0.69
ATXN2-227ENST00000616825 ERVV-1B6SEH8 477 aa19.35■□□□□ 0.69
ATXN2-227ENST00000616825 FMNL1O95466 1100 aaPredicted RBP19.35■□□□□ 0.69
ATXN2-227ENST00000616825 MFAP3P55082 362 aa19.35■□□□□ 0.69
ATXN2-227ENST00000616825 RASGRP4Q8TDF6 673 aa19.35■□□□□ 0.69
ATXN2-227ENST00000616825 CCDC68Q9H2F9 335 aa19.35■□□□□ 0.69
ATXN2-227ENST00000616825 ATP10DQ9P241 1426 aa19.35■□□□□ 0.69
ATXN2-227ENST00000616825 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.35■□□□□ 0.69
ATXN2-227ENST00000616825 USP14P54578 494 aa19.35■□□□□ 0.69
ATXN2-227ENST00000616825 RAB3IPQ96QF0 476 aaPredicted RBP19.35■□□□□ 0.69
ATXN2-227ENST00000616825 NBPF3Q9H094 633 aa19.35■□□□□ 0.69
ATXN2-227ENST00000616825 SPDYE16A6NNV3 312 aaPredicted RBP19.35■□□□□ 0.69
ATXN2-227ENST00000616825 THAP12O43422 761 aa19.35■□□□□ 0.69
ATXN2-227ENST00000616825 SLFN14P0C7P3 912 aa19.35■□□□□ 0.69
ATXN2-227ENST00000616825 SPDYE2Q495Y8 402 aa19.35■□□□□ 0.69
ATXN2-227ENST00000616825 DISC1Q9NRI5 854 aa19.35■□□□□ 0.69
ATXN2-227ENST00000616825 CASQ2O14958 399 aaPredicted RBP19.34■□□□□ 0.69
ATXN2-227ENST00000616825 PFDN6O15212 129 aa19.34■□□□□ 0.69
ATXN2-227ENST00000616825 PHLDB2Q86SQ0 1253 aa19.34■□□□□ 0.69
ATXN2-227ENST00000616825 ZNF589Q86UQ0 364 aaPredicted RBP19.34■□□□□ 0.69
ATXN2-227ENST00000616825 PRPF31Q8WWY3 499 aaKnown RBP19.34■□□□□ 0.69
ATXN2-227ENST00000616825 NACC1Q96RE7 527 aa19.34■□□□□ 0.69
ATXN2-227ENST00000616825 TLR3O15455 904 aaKnown RBP19.34■□□□□ 0.69
ATXN2-227ENST00000616825 LMNB1P20700 586 aa19.34■□□□□ 0.69
ATXN2-227ENST00000616825 PLCB4Q15147 1175 aa19.34■□□□□ 0.69
ATXN2-227ENST00000616825 SESTD1Q86VW0 696 aa19.34■□□□□ 0.69
ATXN2-227ENST00000616825 RETREG2Q8NC44 543 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms