RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, humanhuman

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-216ENST00000616614 MAMDC4Q6UXC1 1216 aa36.8■■■■□ 3.48
FMR1-216ENST00000616614 PHKBQ93100 1093 aa36.8■■■■□ 3.48
FMR1-216ENST00000616614 COL20A1Q9P218 1284 aa36.8■■■■□ 3.48
FMR1-216ENST00000616614 LARGE1O95461 756 aa36.79■■■■□ 3.48
FMR1-216ENST00000616614 CCND3P30281 292 aaPredicted RBP36.79■■■■□ 3.48
FMR1-216ENST00000616614 SCRN1Q12765 414 aa36.79■■■■□ 3.48
FMR1-216ENST00000616614 MCF2L2Q86YR7 1114 aa36.79■■■■□ 3.48
FMR1-216ENST00000616614 GPKOWQ92917 476 aaPredicted RBP eCLIP36.79■■■■□ 3.48
FMR1-216ENST00000616614 RNF208Q9H0X6 261 aa36.79■■■■□ 3.48
FMR1-216ENST00000616614 RPTORQ8N122 1335 aa36.79■■■■□ 3.48
FMR1-216ENST00000616614 SNAI1O95863 264 aaPredicted RBP36.78■■■■□ 3.48
FMR1-216ENST00000616614 GHRHRQ02643 423 aa36.78■■■■□ 3.48
FMR1-216ENST00000616614 TRAF1Q13077 416 aa36.78■■■■□ 3.48
FMR1-216ENST00000616614 SYTL5Q8TDW5 730 aaPredicted RBP36.78■■■■□ 3.48
FMR1-216ENST00000616614 PFKFB2O60825 505 aa36.77■■■■□ 3.48
FMR1-216ENST00000616614 CFBP00751 764 aa36.77■■■■□ 3.48
FMR1-216ENST00000616614 ME3Q16798 604 aa36.77■■■■□ 3.48
FMR1-216ENST00000616614 HMX1Q9NP08 348 aaPredicted RBP36.77■■■■□ 3.48
FMR1-216ENST00000616614 PAK6Q9NQU5 681 aaPredicted RBP36.77■■■■□ 3.48
FMR1-216ENST00000616614 POTEFA5A3E0 1075 aa36.76■■■■□ 3.48
FMR1-216ENST00000616614 CYBAP13498 195 aa36.76■■■■□ 3.48
FMR1-216ENST00000616614 IFNAR1P17181 557 aa36.76■■■■□ 3.48
FMR1-216ENST00000616614 HSD17B4P51659 736 aa36.76■■■■□ 3.48
FMR1-216ENST00000616614 WWC2Q6AWC2 1192 aa36.76■■■■□ 3.48
FMR1-216ENST00000616614 MSL3Q8N5Y2 521 aaKnown RBP36.76■■■■□ 3.48
FMR1-216ENST00000616614 MAF1Q9H063 256 aa36.76■■■■□ 3.48
FMR1-216ENST00000616614 XRN2Q9H0D6 950 aaKnown RBP eCLIP36.76■■■■□ 3.48
FMR1-216ENST00000616614 SOX10P56693 466 aa36.76■■■■□ 3.47
FMR1-216ENST00000616614 TYW1BQ6NUM6 668 aa36.76■■■■□ 3.47
FMR1-216ENST00000616614 HEATR3Q7Z4Q2 680 aa36.76■■■■□ 3.47
FMR1-216ENST00000616614 SLKQ9H2G2 1235 aaPredicted RBP36.76■■■■□ 3.47
FMR1-216ENST00000616614 PLXNA1Q9UIW2 1896 aa36.75■■■■□ 3.47
FMR1-216ENST00000616614 HOXA13P31271 388 aaPredicted RBP36.75■■■■□ 3.47
FMR1-216ENST00000616614 PKN1Q16512 942 aa36.75■■■■□ 3.47
FMR1-216ENST00000616614 ARMCX2Q7L311 632 aa36.75■■■■□ 3.47
FMR1-216ENST00000616614 TAAR1Q96RJ0 339 aa36.75■■■■□ 3.47
FMR1-216ENST00000616614 SYNGAP1Q96PV0 1343 aa36.75■■■■□ 3.47
FMR1-216ENST00000616614 LCTP09848 1927 aa36.74■■■■□ 3.47
FMR1-216ENST00000616614 MYH6P13533 1939 aa36.74■■■■□ 3.47
FMR1-216ENST00000616614 PRPF3O43395 683 aaKnown RBP36.74■■■■□ 3.47
FMR1-216ENST00000616614 DTNBO60941 627 aa36.74■■■■□ 3.47
FMR1-216ENST00000616614 CAPN15O75808 1086 aa36.74■■■■□ 3.47
FMR1-216ENST00000616614 ALDH5A1P51649 535 aaPredicted RBP36.74■■■■□ 3.47
FMR1-216ENST00000616614 NECAB1Q8N987 351 aa36.74■■■■□ 3.47
FMR1-216ENST00000616614 CDKN2AIPQ9NXV6 580 aaPredicted RBP36.74■■■■□ 3.47
FMR1-216ENST00000616614 RABEP1Q15276 862 aa36.73■■■■□ 3.47
FMR1-216ENST00000616614 TMEM106CQ9BVX2 250 aa36.73■■■■□ 3.47
FMR1-216ENST00000616614 ZNF865P0CJ78 1059 aaPredicted RBP36.72■■■■□ 3.47
FMR1-216ENST00000616614 PFKFB3Q16875 520 aaPredicted RBP36.72■■■■□ 3.47
FMR1-216ENST00000616614 DEFB118Q96PH6 123 aa36.72■■■■□ 3.47
FMR1-216ENST00000616614 SLC26A6Q9BXS9 759 aa36.72■■■■□ 3.47
FMR1-216ENST00000616614 KATNBL1Q9H079 304 aa36.72■■■■□ 3.47
FMR1-216ENST00000616614 STXBP3O00186 592 aa36.71■■■■□ 3.47
FMR1-216ENST00000616614 GJB1P08034 283 aa36.71■■■■□ 3.47
FMR1-216ENST00000616614 MORC4Q8TE76 937 aa36.71■■■■□ 3.47
FMR1-216ENST00000616614 RNF26Q9BY78 433 aaPredicted RBP36.71■■■■□ 3.47
FMR1-216ENST00000616614 ADD3Q9UEY8 706 aaKnown RBP36.71■■■■□ 3.47
FMR1-216ENST00000616614 ASB14A6NK59 587 aa36.7■■■■□ 3.47
FMR1-216ENST00000616614 GCOM1H8Y6P7 765 aaPredicted RBP36.7■■■■□ 3.47
FMR1-216ENST00000616614 POLR2MP0CAP2 368 aa36.7■■■■□ 3.47
FMR1-216ENST00000616614 CPLX1O14810 134 aa36.69■■■■□ 3.46
FMR1-216ENST00000616614 CTDNEP1O95476 244 aa36.69■■■■□ 3.46
FMR1-216ENST00000616614 SCG2P13521 617 aa36.69■■■■□ 3.46
FMR1-216ENST00000616614 CNGA1P29973 690 aa36.69■■■■□ 3.46
FMR1-216ENST00000616614 ST3GAL1Q11201 340 aa36.69■■■■□ 3.46
FMR1-216ENST00000616614 DNERQ8NFT8 737 aa36.69■■■■□ 3.46
FMR1-216ENST00000616614 BARHL2Q9NY43 387 aa36.69■■■■□ 3.46
FMR1-216ENST00000616614 MAP3K20Q9NYL2 800 aaKnown RBP36.69■■■■□ 3.46
FMR1-216ENST00000616614 NRBP1Q9UHY1 535 aa36.69■■■■□ 3.46
FMR1-216ENST00000616614 LIMCH1Q9UPQ0 1083 aa36.69■■■■□ 3.46
FMR1-216ENST00000616614 MEIS2O14770 477 aa36.68■■■■□ 3.46
FMR1-216ENST00000616614 EN2P19622 333 aaPredicted RBP36.68■■■■□ 3.46
FMR1-216ENST00000616614 LHX8Q68G74 356 aa36.68■■■■□ 3.46
FMR1-216ENST00000616614 USP17L6PQ6QN14 398 aa36.68■■■■□ 3.46
FMR1-216ENST00000616614 SAMD3Q8N6K7 520 aa36.68■■■■□ 3.46
FMR1-216ENST00000616614 CNPY2Q9Y2B0 182 aa36.68■■■■□ 3.46
FMR1-216ENST00000616614 ACVR2BQ13705 512 aa36.68■■■■□ 3.46
FMR1-216ENST00000616614 U2AF1L4Q8WU68 220 aaKnown RBP36.68■■■■□ 3.46
FMR1-216ENST00000616614 GTF3C6Q969F1 213 aa36.68■■■■□ 3.46
FMR1-216ENST00000616614 SHISA4Q96DD7 197 aa36.68■■■■□ 3.46
FMR1-216ENST00000616614 PSTPIP2Q9H939 334 aa36.68■■■■□ 3.46
FMR1-216ENST00000616614 EDNRBP24530 442 aa36.67■■■■□ 3.46
FMR1-216ENST00000616614 GJA8P48165 433 aa36.67■■■■□ 3.46
FMR1-216ENST00000616614 NAPAP54920 295 aa36.67■■■■□ 3.46
FMR1-216ENST00000616614 RMDN3Q96TC7 470 aa36.67■■■■□ 3.46
FMR1-216ENST00000616614 CD2BP2O95400 341 aaKnown RBP36.66■■■■□ 3.46
FMR1-216ENST00000616614 SGPL1O95470 568 aa36.66■■■■□ 3.46
FMR1-216ENST00000616614 SSRP1Q08945 709 aaKnown RBP36.66■■■■□ 3.46
FMR1-216ENST00000616614 EEPD1Q7L9B9 569 aa36.66■■■■□ 3.46
FMR1-216ENST00000616614 FCHSD1Q86WN1 690 aa36.66■■■■□ 3.46
FMR1-216ENST00000616614 ABHD16BQ9H3Z7 469 aa36.66■■■■□ 3.46
FMR1-216ENST00000616614 RBM27Q9P2N5 1060 aaKnown RBP36.66■■■■□ 3.46
FMR1-216ENST00000616614 ZHX1Q9UKY1 873 aaPredicted RBP36.66■■■■□ 3.46
FMR1-216ENST00000616614 PIK3CDO00329 1044 aa36.65■■■■□ 3.46
FMR1-216ENST00000616614 SEPT4O43236 478 aa36.65■■■■□ 3.46
FMR1-216ENST00000616614 AKAP17AQ02040 695 aaKnown RBP36.65■■■■□ 3.46
FMR1-216ENST00000616614 ANO1Q5XXA6 986 aa36.65■■■■□ 3.46
FMR1-216ENST00000616614 NSUN6Q8TEA1 469 aaKnown RBP36.65■■■■□ 3.46
FMR1-216ENST00000616614 PXMP2Q9NR77 195 aa36.65■■■■□ 3.46
FMR1-216ENST00000616614 DDX20Q9UHI6 824 aaKnown RBP36.65■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms