RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 HOMER1Q86YM7 354 aa25.75■■□□□ 1.71
CBWD3-212ENST00000616550 TSEN34Q9BSV6 310 aaKnown RBP25.75■■□□□ 1.71
CBWD3-212ENST00000616550 VTA1Q9NP79 307 aa25.75■■□□□ 1.71
CBWD3-212ENST00000616550 ZMYND8Q9ULU4 1186 aaPredicted RBP25.75■■□□□ 1.71
CBWD3-212ENST00000616550 ADCY6O43306 1168 aa25.74■■□□□ 1.71
CBWD3-212ENST00000616550 C6orf222P0C671 652 aaPredicted RBP25.74■■□□□ 1.71
CBWD3-212ENST00000616550 KRT32Q14532 448 aa25.74■■□□□ 1.71
CBWD3-212ENST00000616550 IQSEC1Q6DN90 963 aa25.74■■□□□ 1.71
CBWD3-212ENST00000616550 CHRDL2Q6WN34 429 aa25.74■■□□□ 1.71
CBWD3-212ENST00000616550 FBXO16Q8IX29 292 aaPredicted RBP25.74■■□□□ 1.71
CBWD3-212ENST00000616550 MYL10Q9BUA6 226 aa25.74■■□□□ 1.71
CBWD3-212ENST00000616550 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.73■■□□□ 1.71
CBWD3-212ENST00000616550 GJA9P57773 515 aa25.73■■□□□ 1.71
CBWD3-212ENST00000616550 RTP1P59025 263 aa25.73■■□□□ 1.71
CBWD3-212ENST00000616550 PDE4DQ08499 809 aa25.73■■□□□ 1.71
CBWD3-212ENST00000616550 COL9A3Q14050 684 aaPredicted RBP25.73■■□□□ 1.71
CBWD3-212ENST00000616550 TAPT1Q6NXT6 567 aa25.73■■□□□ 1.71
CBWD3-212ENST00000616550 RASEFQ8IZ41 740 aa25.73■■□□□ 1.71
CBWD3-212ENST00000616550 KLHDC9Q8NEP7 349 aa25.73■■□□□ 1.71
CBWD3-212ENST00000616550 TBC1D5Q92609 795 aa25.73■■□□□ 1.71
CBWD3-212ENST00000616550 PIGSQ96S52 555 aa25.73■■□□□ 1.71
CBWD3-212ENST00000616550 LRRC2Q9BYS8 371 aa25.73■■□□□ 1.71
CBWD3-212ENST00000616550 PDGFCQ9NRA1 345 aa25.73■■□□□ 1.71
CBWD3-212ENST00000616550 PCDHA1Q9Y5I3 950 aa25.73■■□□□ 1.71
CBWD3-212ENST00000616550 SLC12A7Q9Y666 1083 aa25.73■■□□□ 1.71
CBWD3-212ENST00000616550 CYTH3O43739 400 aa25.72■■□□□ 1.71
CBWD3-212ENST00000616550 REC8O95072 547 aa25.72■■□□□ 1.71
CBWD3-212ENST00000616550 CALM1P0DP23 149 aa25.72■■□□□ 1.71
CBWD3-212ENST00000616550 CALM2P0DP24 149 aa25.72■■□□□ 1.71
CBWD3-212ENST00000616550 CALM3P0DP25 149 aa25.72■■□□□ 1.71
CBWD3-212ENST00000616550 SYN1P17600 705 aa25.72■■□□□ 1.71
CBWD3-212ENST00000616550 GNAQP50148 359 aa25.72■■□□□ 1.71
CBWD3-212ENST00000616550 KCNA10Q16322 511 aa25.72■■□□□ 1.71
CBWD3-212ENST00000616550 PCSK9Q8NBP7 692 aaKnown RBP25.72■■□□□ 1.71
CBWD3-212ENST00000616550 UPF3AQ9H1J1 476 aaKnown RBP25.72■■□□□ 1.71
CBWD3-212ENST00000616550 PNMA6FA0A0J9YX94 578 aa25.71■■□□□ 1.71
CBWD3-212ENST00000616550 MOXD2PA6NHM9 499 aa25.71■■□□□ 1.71
CBWD3-212ENST00000616550 PPP1R11O60927 126 aaPredicted RBP25.71■■□□□ 1.71
CBWD3-212ENST00000616550 CST5P28325 142 aaPredicted RBP25.71■■□□□ 1.71
CBWD3-212ENST00000616550 ACLYP53396 1101 aa25.71■■□□□ 1.71
CBWD3-212ENST00000616550 SLC35G1Q2M3R5 365 aa25.71■■□□□ 1.71
CBWD3-212ENST00000616550 HABP4Q5JVS0 413 aaKnown RBP25.71■■□□□ 1.71
CBWD3-212ENST00000616550 GNASQ5JWF2 1037 aa25.71■■□□□ 1.71
CBWD3-212ENST00000616550 DHX32Q7L7V1 743 aaKnown RBP25.71■■□□□ 1.71
CBWD3-212ENST00000616550 SYTL5Q8TDW5 730 aaPredicted RBP25.71■■□□□ 1.71
CBWD3-212ENST00000616550 LZTS2Q9BRK4 669 aa25.71■■□□□ 1.71
CBWD3-212ENST00000616550 GNEQ9Y223 722 aaKnown RBP25.71■■□□□ 1.71
CBWD3-212ENST00000616550 ATP11BQ9Y2G3 1177 aa25.71■■□□□ 1.71
CBWD3-212ENST00000616550 A0A1W2PQ45 241 aaPredicted RBP25.7■■□□□ 1.7
CBWD3-212ENST00000616550 A0A1W2PQY0 241 aa25.7■■□□□ 1.7
CBWD3-212ENST00000616550 MYADML2A6NDP7 307 aa25.7■■□□□ 1.7
CBWD3-212ENST00000616550 CFBP00751 764 aa25.7■■□□□ 1.7
CBWD3-212ENST00000616550 HMGB1P09429 215 aaKnown RBP25.7■■□□□ 1.7
CBWD3-212ENST00000616550 SMPD1P17405 629 aa25.7■■□□□ 1.7
CBWD3-212ENST00000616550 SMARCA1P28370 1054 aa25.7■■□□□ 1.7
CBWD3-212ENST00000616550 ADCK5Q3MIX3 580 aa25.7■■□□□ 1.7
CBWD3-212ENST00000616550 SYNE3Q6ZMZ3 975 aa25.7■■□□□ 1.7
CBWD3-212ENST00000616550 NSUN6Q8TEA1 469 aaKnown RBP25.7■■□□□ 1.7
CBWD3-212ENST00000616550 TAAR1Q96RJ0 339 aa25.7■■□□□ 1.7
CBWD3-212ENST00000616550 AP5M1Q9H0R1 490 aa25.7■■□□□ 1.7
CBWD3-212ENST00000616550 LRRC37A2A6NM11 1700 aa25.7■■□□□ 1.7
CBWD3-212ENST00000616550 EDNRBP24530 442 aa25.69■■□□□ 1.7
CBWD3-212ENST00000616550 EXOSC10Q01780 885 aaKnown RBP25.69■■□□□ 1.7
CBWD3-212ENST00000616550 SNX17Q15036 470 aa25.69■■□□□ 1.7
CBWD3-212ENST00000616550 C1orf53Q5VUE5 145 aa25.69■■□□□ 1.7
CBWD3-212ENST00000616550 CCSAPQ6IQ19 270 aaPredicted RBP25.69■■□□□ 1.7
CBWD3-212ENST00000616550 TLK2Q86UE8 772 aa25.69■■□□□ 1.7
CBWD3-212ENST00000616550 SGMS1Q86VZ5 419 aa25.69■■□□□ 1.7
CBWD3-212ENST00000616550 SAMD3Q8N6K7 520 aa25.69■■□□□ 1.7
CBWD3-212ENST00000616550 PIBF1Q8WXW3 757 aa25.69■■□□□ 1.7
CBWD3-212ENST00000616550 RRP36Q96EU6 259 aaKnown RBP25.69■■□□□ 1.7
CBWD3-212ENST00000616550 SPZ1Q9BXG8 430 aa25.69■■□□□ 1.7
CBWD3-212ENST00000616550 MAP3K20Q9NYL2 800 aaKnown RBP25.69■■□□□ 1.7
CBWD3-212ENST00000616550 Q9Y3F1 56 aa25.69■■□□□ 1.7
CBWD3-212ENST00000616550 DYNC1LI2O43237 492 aaPredicted RBP25.68■■□□□ 1.7
CBWD3-212ENST00000616550 RMDN3Q96TC7 470 aa25.68■■□□□ 1.7
CBWD3-212ENST00000616550 WDR11Q9BZH6 1224 aa25.68■■□□□ 1.7
CBWD3-212ENST00000616550 STARD7Q9NQZ5 370 aa25.68■■□□□ 1.7
CBWD3-212ENST00000616550 COL20A1Q9P218 1284 aa25.68■■□□□ 1.7
CBWD3-212ENST00000616550 PRKAG2Q9UGJ0 569 aa25.68■■□□□ 1.7
CBWD3-212ENST00000616550 ASGR1P07306 291 aa25.67■■□□□ 1.7
CBWD3-212ENST00000616550 RXRAP19793 462 aa25.67■■□□□ 1.7
CBWD3-212ENST00000616550 HSPA4P34932 840 aa25.67■■□□□ 1.7
CBWD3-212ENST00000616550 NKX3-2P78367 333 aa25.67■■□□□ 1.7
CBWD3-212ENST00000616550 IRX5P78411 483 aaPredicted RBP25.67■■□□□ 1.7
CBWD3-212ENST00000616550 TRIM60Q495X7 471 aa25.67■■□□□ 1.7
CBWD3-212ENST00000616550 DUSP28Q4G0W2 176 aa25.67■■□□□ 1.7
CBWD3-212ENST00000616550 ARHGEF16Q5VV41 709 aa25.67■■□□□ 1.7
CBWD3-212ENST00000616550 KCNB2Q92953 911 aa25.67■■□□□ 1.7
CBWD3-212ENST00000616550 VTI1AQ96AJ9 217 aa25.67■■□□□ 1.7
CBWD3-212ENST00000616550 TCEANC2Q96MN5 208 aa25.67■■□□□ 1.7
CBWD3-212ENST00000616550 GLT1D1Q96MS3 346 aa25.67■■□□□ 1.7
CBWD3-212ENST00000616550 IWS1Q96ST2 819 aa25.67■■□□□ 1.7
CBWD3-212ENST00000616550 RBM27Q9P2N5 1060 aaKnown RBP25.67■■□□□ 1.7
CBWD3-212ENST00000616550 RBM47A0AV96 593 aaKnown RBP25.66■■□□□ 1.7
CBWD3-212ENST00000616550 OPLAHO14841 1288 aa25.66■■□□□ 1.7
CBWD3-212ENST00000616550 ZEB2O60315 1214 aa25.66■■□□□ 1.7
CBWD3-212ENST00000616550 HSD17B4P51659 736 aa25.66■■□□□ 1.7
CBWD3-212ENST00000616550 FSCN1Q16658 493 aaKnown RBP25.66■■□□□ 1.7
CBWD3-212ENST00000616550 FANCBQ8NB91 859 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms