RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 SYNRGQ9UMZ2 1314 aa19.78■□□□□ 0.76
LHX1-202ENST00000616237 EVI5O60447 810 aa19.78■□□□□ 0.76
LHX1-202ENST00000616237 PLEKHA8P1O95397 391 aa19.78■□□□□ 0.76
LHX1-202ENST00000616237 MYCNP04198 464 aaPredicted RBP19.78■□□□□ 0.76
LHX1-202ENST00000616237 PTGS1P23219 599 aa19.78■□□□□ 0.76
LHX1-202ENST00000616237 KRT32Q14532 448 aa19.78■□□□□ 0.76
LHX1-202ENST00000616237 TAPT1Q6NXT6 567 aa19.78■□□□□ 0.76
LHX1-202ENST00000616237 FBXO16Q8IX29 292 aaPredicted RBP19.78■□□□□ 0.76
LHX1-202ENST00000616237 SYTL5Q8TDW5 730 aaPredicted RBP19.78■□□□□ 0.76
LHX1-202ENST00000616237 ADD3Q9UEY8 706 aaKnown RBP19.78■□□□□ 0.76
LHX1-202ENST00000616237 MRPL11Q9Y3B7 192 aaKnown RBP19.78■□□□□ 0.76
LHX1-202ENST00000616237 MYADML2A6NDP7 307 aa19.77■□□□□ 0.76
LHX1-202ENST00000616237 DUSP11O75319 330 aaKnown RBP19.77■□□□□ 0.76
LHX1-202ENST00000616237 REC8O95072 547 aa19.77■□□□□ 0.76
LHX1-202ENST00000616237 EDNRBP24530 442 aa19.77■□□□□ 0.76
LHX1-202ENST00000616237 ADCYAP1R1P41586 468 aa19.77■□□□□ 0.76
LHX1-202ENST00000616237 CMTR1Q8N1G2 835 aaKnown RBP19.77■□□□□ 0.76
LHX1-202ENST00000616237 SRBD1Q8N5C6 995 aaKnown RBP19.77■□□□□ 0.76
LHX1-202ENST00000616237 KLHDC9Q8NEP7 349 aa19.77■□□□□ 0.76
LHX1-202ENST00000616237 CTCFLQ8NI51 663 aaPredicted RBP19.77■□□□□ 0.76
LHX1-202ENST00000616237 BRPF3Q9ULD4 1205 aa19.77■□□□□ 0.76
LHX1-202ENST00000616237 SLC12A7Q9Y666 1083 aa19.77■□□□□ 0.76
LHX1-202ENST00000616237 CCSAPQ6IQ19 270 aaPredicted RBP19.76■□□□□ 0.75
LHX1-202ENST00000616237 PIBF1Q8WXW3 757 aa19.76■□□□□ 0.75
LHX1-202ENST00000616237 TAAR1Q96RJ0 339 aa19.76■□□□□ 0.75
LHX1-202ENST00000616237 SPZ1Q9BXG8 430 aa19.76■□□□□ 0.75
LHX1-202ENST00000616237 PCDH10Q9P2E7 1040 aa19.76■□□□□ 0.75
LHX1-202ENST00000616237 PCDHA1Q9Y5I3 950 aa19.76■□□□□ 0.75
LHX1-202ENST00000616237 LOC102724159A0A0B4J2E5 919 aa19.75■□□□□ 0.75
LHX1-202ENST00000616237 PNMA6FA0A0J9YX94 578 aa19.75■□□□□ 0.75
LHX1-202ENST00000616237 KBTBD13C9JR72 458 aa19.75■□□□□ 0.75
LHX1-202ENST00000616237 CTAGE5O15320 804 aa19.75■□□□□ 0.75
LHX1-202ENST00000616237 SMPD1P17405 629 aa19.75■□□□□ 0.75
LHX1-202ENST00000616237 KIF5BP33176 963 aa19.75■□□□□ 0.75
LHX1-202ENST00000616237 ATN1P54259 1190 aaPredicted RBP19.75■□□□□ 0.75
LHX1-202ENST00000616237 GHRHRQ02643 423 aa19.75■□□□□ 0.75
LHX1-202ENST00000616237 PWP2Q15269 919 aaKnown RBP19.75■□□□□ 0.75
LHX1-202ENST00000616237 RNF180Q86T96 592 aa19.75■□□□□ 0.75
LHX1-202ENST00000616237 MCF2L2Q86YR7 1114 aa19.75■□□□□ 0.75
LHX1-202ENST00000616237 C7orf61Q8IZ16 206 aa19.75■□□□□ 0.75
LHX1-202ENST00000616237 DNERQ8NFT8 737 aa19.75■□□□□ 0.75
LHX1-202ENST00000616237 FERMT2Q96AC1 680 aa19.75■□□□□ 0.75
LHX1-202ENST00000616237 JAKMIP1Q96N16 626 aaKnown RBP19.75■□□□□ 0.75
LHX1-202ENST00000616237 USP26Q9BXU7 913 aa19.75■□□□□ 0.75
LHX1-202ENST00000616237 MAF1Q9H063 256 aa19.75■□□□□ 0.75
LHX1-202ENST00000616237 PHF24Q9UPV7 400 aa19.75■□□□□ 0.75
LHX1-202ENST00000616237 GNEQ9Y223 722 aaKnown RBP19.75■□□□□ 0.75
LHX1-202ENST00000616237 NR2E3Q9Y5X4 410 aa19.75■□□□□ 0.75
LHX1-202ENST00000616237 SMARCA1P28370 1054 aa19.74■□□□□ 0.75
LHX1-202ENST00000616237 GJA9P57773 515 aa19.74■□□□□ 0.75
LHX1-202ENST00000616237 TNFAIP2Q03169 654 aa19.74■□□□□ 0.75
LHX1-202ENST00000616237 APOA5Q6Q788 366 aa19.74■□□□□ 0.75
LHX1-202ENST00000616237 MICU3Q86XE3 530 aa19.74■□□□□ 0.75
LHX1-202ENST00000616237 FANCBQ8NB91 859 aa19.74■□□□□ 0.75
LHX1-202ENST00000616237 UPF3AQ9H1J1 476 aaKnown RBP19.74■□□□□ 0.75
LHX1-202ENST00000616237 VTA1Q9NP79 307 aa19.74■□□□□ 0.75
LHX1-202ENST00000616237 RANBP2P49792 3224 aaKnown RBP19.73■□□□□ 0.75
LHX1-202ENST00000616237 EPB41L2O43491 1005 aaKnown RBP19.73■□□□□ 0.75
LHX1-202ENST00000616237 CFBP00751 764 aa19.73■□□□□ 0.75
LHX1-202ENST00000616237 HMGB1P09429 215 aaKnown RBP19.73■□□□□ 0.75
LHX1-202ENST00000616237 CALM1P0DP23 149 aa19.73■□□□□ 0.75
LHX1-202ENST00000616237 CALM2P0DP24 149 aa19.73■□□□□ 0.75
LHX1-202ENST00000616237 CALM3P0DP25 149 aa19.73■□□□□ 0.75
LHX1-202ENST00000616237 HSD17B4P51659 736 aa19.73■□□□□ 0.75
LHX1-202ENST00000616237 NKX3-2P78367 333 aa19.73■□□□□ 0.75
LHX1-202ENST00000616237 SLC39A5Q6ZMH5 540 aa19.73■□□□□ 0.75
LHX1-202ENST00000616237 RBM47A0AV96 593 aaKnown RBP19.72■□□□□ 0.75
LHX1-202ENST00000616237 C6orf222P0C671 652 aaPredicted RBP19.72■□□□□ 0.75
LHX1-202ENST00000616237 CST5P28325 142 aaPredicted RBP19.72■□□□□ 0.75
LHX1-202ENST00000616237 GNAQP50148 359 aa19.72■□□□□ 0.75
LHX1-202ENST00000616237 IQSEC1Q6DN90 963 aa19.72■□□□□ 0.75
LHX1-202ENST00000616237 TMTC3Q6ZXV5 915 aa19.72■□□□□ 0.75
LHX1-202ENST00000616237 LZTS2Q9BRK4 669 aa19.72■□□□□ 0.75
LHX1-202ENST00000616237 ZMYND8Q9ULU4 1186 aaPredicted RBP19.72■□□□□ 0.75
LHX1-202ENST00000616237 HOXA13P31271 388 aaPredicted RBP19.71■□□□□ 0.75
LHX1-202ENST00000616237 ACLYP53396 1101 aa19.71■□□□□ 0.75
LHX1-202ENST00000616237 PDE4DQ08499 809 aa19.71■□□□□ 0.75
LHX1-202ENST00000616237 SNX17Q15036 470 aa19.71■□□□□ 0.75
LHX1-202ENST00000616237 KCNA10Q16322 511 aa19.71■□□□□ 0.75
LHX1-202ENST00000616237 Q6ZUG5 572 aa19.71■□□□□ 0.75
LHX1-202ENST00000616237 CCDC82Q8N4S0 544 aa19.71■□□□□ 0.75
LHX1-202ENST00000616237 RRP36Q96EU6 259 aaKnown RBP19.71■□□□□ 0.75
LHX1-202ENST00000616237 RMDN3Q96TC7 470 aa19.71■□□□□ 0.75
LHX1-202ENST00000616237 TSEN34Q9BSV6 310 aaKnown RBP19.71■□□□□ 0.75
LHX1-202ENST00000616237 FAM217BQ9NTX9 383 aaPredicted RBP19.71■□□□□ 0.75
LHX1-202ENST00000616237 KLF18A0A0U1RQI7 1052 aa19.7■□□□□ 0.74
LHX1-202ENST00000616237 A0A1W2PQ45 241 aaPredicted RBP19.7■□□□□ 0.74
LHX1-202ENST00000616237 A0A1W2PQY0 241 aa19.7■□□□□ 0.74
LHX1-202ENST00000616237 hCG_1642624A0A1W2PR95 340 aa19.7■□□□□ 0.74
LHX1-202ENST00000616237 SYN1P17600 705 aa19.7■□□□□ 0.74
LHX1-202ENST00000616237 RPS6KB1P23443 525 aa19.7■□□□□ 0.74
LHX1-202ENST00000616237 RTP1P59025 263 aa19.7■□□□□ 0.74
LHX1-202ENST00000616237 BEX3Q00994 111 aa19.7■□□□□ 0.74
LHX1-202ENST00000616237 BLOC1S2Q6QNY1 142 aa19.7■□□□□ 0.74
LHX1-202ENST00000616237 NOL8Q76FK4 1167 aaKnown RBP19.7■□□□□ 0.74
LHX1-202ENST00000616237 NSUN6Q8TEA1 469 aaKnown RBP19.7■□□□□ 0.74
LHX1-202ENST00000616237 PXMP2Q9NR77 195 aa19.7■□□□□ 0.74
LHX1-202ENST00000616237 COLQQ9Y215 455 aaPredicted RBP19.7■□□□□ 0.74
LHX1-202ENST00000616237 DYNC1LI2O43237 492 aaPredicted RBP19.7■□□□□ 0.74
LHX1-202ENST00000616237 ZBTB43O43298 467 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms