RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 SPICE1Q8N0Z3 855 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 ZFP91Q96JP5 570 aaPredicted RBP6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 NUCKS1Q9H1E3 243 aaKnown RBP6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.24□□□□□ -1.412e-8■■■□□ 15.6
SYNCRIP-204ENST00000616122 CNTNAP5Q8WYK1 1306 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 TTLL1O95922 423 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 XRCC5P13010 732 aaKnown RBP6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 AKR1B1P15121 316 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 PPP4CP60510 307 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 CACNB1Q02641 598 aaPredicted RBP6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 IFI16Q16666 785 aaKnown RBP6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 USH1GQ495M9 461 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 CERKLQ49MI3 558 aaPredicted RBP6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 PRR5LQ6MZQ0 368 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 SEPT12Q8IYM1 358 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 ARFGAP2Q8N6H7 521 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 RIC8AQ9NPQ8 531 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 KIAA0754O94854 1291 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 TDP2O95551 362 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 GYPCP04921 128 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 ADRA2BP18089 450 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 NR2F2P24468 414 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 MAP3K9P80192 1104 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 MAPK8IP2Q13387 824 aaPredicted RBP6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 GRM4Q14833 912 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 UTP14CQ5TAP6 766 aaKnown RBP6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 DDX12PQ92771 950 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 PDE11AQ9HCR9 933 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 ABHD10Q9NUJ1 306 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 PLEKHG2Q9H7P9 1386 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 USP17L5A8MUK1 530 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 EXOC3O60645 756 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 ZMYND10O75800 440 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 FLOT1O75955 427 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 MMP10P09238 476 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 CCDC172P0C7W6 258 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 KRT13P13646 458 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 PRPHP41219 470 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 DPYDQ12882 1025 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 TMC4Q7Z404 712 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 MAATS1Q7Z4T9 603 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 ELOA2Q8IYF1 753 aaPredicted RBP6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 FNBP4Q8N3X1 1017 aaPredicted RBP6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 DBNDD1Q9H9R9 158 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 ADAM21Q9UKJ8 722 aa6.24□□□□□ -1.41
SYNCRIP-204ENST00000616122 SHTN1A0MZ66 631 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 EBAG9O00559 213 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 CEP104O60308 925 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 RC3H1Q5TC82 1133 aaKnown RBP6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 NSMFQ6X4W1 530 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 ATRIPQ8WXE1 791 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 BHMT2Q9H2M3 363 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 PKD2L1Q9P0L9 805 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 LIMA1Q9UHB6 759 aaKnown RBP6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 JCADQ9P266 1359 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 LRRC10BA6NIK2 292 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 ALDH1B1P30837 517 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 POLR2FP61218 127 aaKnown RBP6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 TNNC1P63316 161 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 IFFO1Q0D2I5 559 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 KCNB1Q14721 858 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 ZSCAN26Q16670 478 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 VWA3BQ502W6 1294 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 MB21D1Q8N884 522 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 TBC1D5Q92609 795 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 ZEB2O60315 1214 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 EIF4A3P38919 411 aaKnown RBP6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 KCTD1Q719H9 257 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 PODNQ7Z5L7 613 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 TAX1BP1Q86VP1 789 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 CCDC170Q8IYT3 715 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 LACRTQ9GZZ8 138 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 POLD4Q9HCU8 107 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 SH3GLB2Q9NR46 395 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 A0A1W2PQC6 194 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 CD44P16070 742 aaKnown RBP6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 EHHADHQ08426 723 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 CFAP221Q4G0U5 840 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 SFMBT2Q5VUG0 894 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 CDKAL1Q5VV42 579 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 CC2D2BQ6DHV5 1058 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 CCDC174Q6PII3 467 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 FBXO11Q86XK2 927 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 RDH13Q8NBN7 331 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 HPS3Q969F9 1004 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 COA1Q9GZY4 146 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 MTMR4Q9NYA4 1195 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 DAGLAQ9Y4D2 1042 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 GOLGA6BA6NDN3 693 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 hCG_1984214I3L0E3 225 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 SARSP49591 514 aaKnown RBP6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 PLS1Q14651 629 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 UBE2SQ16763 222 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 LARGE2Q8N3Y3 721 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 ZNF713Q8N859 430 aaPredicted RBP6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 LINC00116Q8NCU8 138 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 GIMAP8Q8ND71 665 aaPredicted RBP6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 ZMYND12Q9H0C1 365 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 DDX25Q9UHL0 483 aaKnown RBP6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 HDAC9Q9UKV0 1011 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms