RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 TLR9Q9NR96 1032 aa8.33□□□□□ -1.08
MUC1-227ENST00000615517 MCM9Q9NXL9 1143 aa8.33□□□□□ -1.08
MUC1-227ENST00000615517 FAM50BQ9Y247 325 aa8.33□□□□□ -1.08
MUC1-227ENST00000615517 CFAP47Q6ZTR5 3102 aa8.33□□□□□ -1.08
MUC1-227ENST00000615517 MBTPS2O43462 519 aa8.32□□□□□ -1.08
MUC1-227ENST00000615517 ZXDAP98168 799 aa8.32□□□□□ -1.08
MUC1-227ENST00000615517 CLUL1Q15846 466 aa8.32□□□□□ -1.08
MUC1-227ENST00000615517 PKN1Q16512 942 aa8.32□□□□□ -1.08
MUC1-227ENST00000615517 NBPF20Q3BBV1 942 aa8.32□□□□□ -1.08
MUC1-227ENST00000615517 TNNI3KQ59H18 835 aa8.32□□□□□ -1.08
MUC1-227ENST00000615517 CCDC158Q5M9N0 1113 aa8.32□□□□□ -1.08
MUC1-227ENST00000615517 FAM117BQ6P1L5 589 aa8.32□□□□□ -1.08
MUC1-227ENST00000615517 CERS3Q8IU89 383 aa8.32□□□□□ -1.08
MUC1-227ENST00000615517 SUGP1Q8IWZ8 645 aaKnown RBP8.32□□□□□ -1.08
MUC1-227ENST00000615517 RETREG2Q8NC44 543 aa8.32□□□□□ -1.08
MUC1-227ENST00000615517 BANK1Q8NDB2 785 aa8.32□□□□□ -1.08
MUC1-227ENST00000615517 CTAGE1Q96RT6 745 aa8.32□□□□□ -1.08
MUC1-227ENST00000615517 RAVER2Q9HCJ3 691 aaKnown RBP8.32□□□□□ -1.08
MUC1-227ENST00000615517 CLDND1Q9NY35 253 aa8.32□□□□□ -1.08
MUC1-227ENST00000615517 TRPC6Q9Y210 931 aa8.32□□□□□ -1.08
MUC1-227ENST00000615517 Q9Y3F1 56 aa8.32□□□□□ -1.08
MUC1-227ENST00000615517 FPGT-TNNI3KV9GXZ4 949 aa8.32□□□□□ -1.08
MUC1-227ENST00000615517 CHD8Q9HCK8 2581 aa8.31□□□□□ -1.08
MUC1-227ENST00000615517 MYH7BA7E2Y1 1941 aa8.31□□□□□ -1.08
MUC1-227ENST00000615517 PNMA6EA0A0J9YXQ4 647 aa8.31□□□□□ -1.08
MUC1-227ENST00000615517 RAD21O60216 631 aa8.31□□□□□ -1.08
MUC1-227ENST00000615517 AVPR2P30518 371 aa8.31□□□□□ -1.08
MUC1-227ENST00000615517 CTC1Q2NKJ3 1217 aa8.31□□□□□ -1.08
MUC1-227ENST00000615517 TIGD5Q53EQ6 642 aa8.31□□□□□ -1.08
MUC1-227ENST00000615517 IQSEC1Q6DN90 963 aa8.31□□□□□ -1.08
MUC1-227ENST00000615517 EEPD1Q7L9B9 569 aa8.31□□□□□ -1.08
MUC1-227ENST00000615517 RPAINQ86UA6 219 aa8.31□□□□□ -1.08
MUC1-227ENST00000615517 FBXO16Q8IX29 292 aaPredicted RBP8.31□□□□□ -1.08
MUC1-227ENST00000615517 SDR42E1Q8WUS8 393 aa8.31□□□□□ -1.08
MUC1-227ENST00000615517 ASIC4Q96FT7 647 aa8.31□□□□□ -1.08
MUC1-227ENST00000615517 FSD1Q9BTV5 496 aa8.31□□□□□ -1.08
MUC1-227ENST00000615517 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.31□□□□□ -1.08
MUC1-227ENST00000615517 GOPCQ9HD26 462 aa8.31□□□□□ -1.08
MUC1-227ENST00000615517 DCP1AQ9NPI6 582 aaPredicted RBP8.31□□□□□ -1.08
MUC1-227ENST00000615517 GPR108Q9NPR9 543 aa8.31□□□□□ -1.08
MUC1-227ENST00000615517 TLR7Q9NYK1 1049 aaKnown RBP8.31□□□□□ -1.08
MUC1-227ENST00000615517 SWAP70Q9UH65 585 aa8.31□□□□□ -1.08
MUC1-227ENST00000615517 MYH7P12883 1935 aa8.31□□□□□ -1.08
MUC1-227ENST00000615517 ATRXP46100 2492 aa8.3□□□□□ -1.08
MUC1-227ENST00000615517 MAGEB6P1A0A0J9YX57 407 aa8.3□□□□□ -1.08
MUC1-227ENST00000615517 H3BNC9 293 aa8.3□□□□□ -1.08
MUC1-227ENST00000615517 STXBP3O00186 592 aa8.3□□□□□ -1.08
MUC1-227ENST00000615517 NBNO60934 754 aa8.3□□□□□ -1.08
MUC1-227ENST00000615517 CXCL10P02778 98 aa8.3□□□□□ -1.08
MUC1-227ENST00000615517 MYL3P08590 195 aa8.3□□□□□ -1.08
MUC1-227ENST00000615517 CDK8P49336 464 aa8.3□□□□□ -1.08
MUC1-227ENST00000615517 G3BP1Q13283 466 aaKnown RBP eCLIP8.3□□□□□ -1.08
MUC1-227ENST00000615517 BFSP2Q13515 415 aa8.3□□□□□ -1.08
MUC1-227ENST00000615517 PTPROQ16827 1216 aa8.3□□□□□ -1.08
MUC1-227ENST00000615517 EPC2Q52LR7 807 aa8.3□□□□□ -1.08
MUC1-227ENST00000615517 FAM47CQ5HY64 1035 aa8.3□□□□□ -1.08
MUC1-227ENST00000615517 CNKSR3Q6P9H4 555 aa8.3□□□□□ -1.08
MUC1-227ENST00000615517 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.3□□□□□ -1.08
MUC1-227ENST00000615517 CHST13Q8NET6 341 aa8.3□□□□□ -1.08
MUC1-227ENST00000615517 SP7Q8TDD2 431 aaPredicted RBP8.3□□□□□ -1.08
MUC1-227ENST00000615517 DHX38Q92620 1227 aaKnown RBP8.3□□□□□ -1.08
MUC1-227ENST00000615517 POP1Q99575 1024 aaKnown RBP8.3□□□□□ -1.08
MUC1-227ENST00000615517 NSUN3Q9H649 340 aaKnown RBP8.3□□□□□ -1.08
MUC1-227ENST00000615517 SLC38A10Q9HBR0 1119 aa8.3□□□□□ -1.08
MUC1-227ENST00000615517 A1CFQ9NQ94 594 aaKnown RBP8.3□□□□□ -1.08
MUC1-227ENST00000615517 POLR3EQ9NVU0 708 aa8.3□□□□□ -1.08
MUC1-227ENST00000615517 FBXO40Q9UH90 709 aa8.3□□□□□ -1.08
MUC1-227ENST00000615517 CTNNA3Q9UI47 895 aa8.3□□□□□ -1.08
MUC1-227ENST00000615517 DBNLQ9UJU6 430 aaKnown RBP8.3□□□□□ -1.08
MUC1-227ENST00000615517 HDAC5Q9UQL6 1122 aa8.3□□□□□ -1.08
MUC1-227ENST00000615517 KIAA1671Q9BY89 1806 aa8.29□□□□□ -1.08
MUC1-227ENST00000615517 CYP2D7A0A087X1C5 515 aa8.29□□□□□ -1.08
MUC1-227ENST00000615517 ASB14A6NK59 587 aa8.29□□□□□ -1.08
MUC1-227ENST00000615517 ZBED4O75132 1171 aa8.29□□□□□ -1.08
MUC1-227ENST00000615517 GTF2F1P35269 517 aaKnown RBP eCLIP8.29□□□□□ -1.08
MUC1-227ENST00000615517 NBL1P41271 181 aa8.29□□□□□ -1.08
MUC1-227ENST00000615517 HTRA4P83105 476 aaPredicted RBP8.29□□□□□ -1.08
MUC1-227ENST00000615517 GPM6BQ13491 265 aa8.29□□□□□ -1.08
MUC1-227ENST00000615517 LRRFIP1Q32MZ4 808 aaKnown RBP8.29□□□□□ -1.08
MUC1-227ENST00000615517 DUSP28Q4G0W2 176 aa8.29□□□□□ -1.08
MUC1-227ENST00000615517 NFRKBQ6P4R8 1299 aa8.29□□□□□ -1.08
MUC1-227ENST00000615517 KIAA1211Q6ZU35 1233 aa8.29□□□□□ -1.08
MUC1-227ENST00000615517 LCORLQ8N3X6 602 aa8.29□□□□□ -1.08
MUC1-227ENST00000615517 PRPF38AQ8NAV1 312 aaKnown RBP8.29□□□□□ -1.08
MUC1-227ENST00000615517 CCDC17Q96LX7 622 aa8.29□□□□□ -1.08
MUC1-227ENST00000615517 MTG1Q9BT17 334 aaPredicted RBP8.29□□□□□ -1.08
MUC1-227ENST00000615517 CRNKL1Q9BZJ0 848 aaKnown RBP8.29□□□□□ -1.08
MUC1-227ENST00000615517 IRF2BPLQ9H1B7 796 aa8.29□□□□□ -1.08
MUC1-227ENST00000615517 KANSL2Q9H9L4 492 aa8.29□□□□□ -1.08
MUC1-227ENST00000615517 HOMER2Q9NSB8 354 aa8.29□□□□□ -1.08
MUC1-227ENST00000615517 FRYLO94915 3013 aa8.29□□□□□ -1.08
MUC1-227ENST00000615517 USP24Q9UPU5 2620 aa8.29□□□□□ -1.08
MUC1-227ENST00000615517 KIAA1217Q5T5P2 1943 aa8.29□□□□□ -1.08
MUC1-227ENST00000615517 ABHD14A-ACY1A0A1B0GW23 586 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 LOC730098B7Z3J9 87 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 F5H6K3 240 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 LINC01565O15544 149 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 PRKAB2O43741 272 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 TBX10O75333 385 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 NDUFB10O96000 172 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms