RNA–Protein interactions for RNA: ENST00000613667.1

LINC00649-216, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 827 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-216ENST00000613667 CRAMP1Q96RY5 1269 aa3.88□□□□□ -1.79
LINC00649-216ENST00000613667 C11orf84Q9BUA3 381 aaPredicted RBP3.88□□□□□ -1.79
LINC00649-216ENST00000613667 C1orf115Q9H7X2 142 aa3.88□□□□□ -1.79
LINC00649-216ENST00000613667 PCDH18Q9HCL0 1135 aa3.88□□□□□ -1.79
LINC00649-216ENST00000613667 PATE3B3GLJ2 98 aa3.87□□□□□ -1.79
LINC00649-216ENST00000613667 CLEC3AO75596 197 aa3.87□□□□□ -1.79
LINC00649-216ENST00000613667 LDHBP07195 334 aaKnown RBP3.87□□□□□ -1.79
LINC00649-216ENST00000613667 INHBCP55103 352 aa3.87□□□□□ -1.79
LINC00649-216ENST00000613667 KRTAP10-9P60411 292 aa3.87□□□□□ -1.79
LINC00649-216ENST00000613667 PRR31Q5SQ13 230 aa3.87□□□□□ -1.79
LINC00649-216ENST00000613667 OVOS1Q6IE37 1185 aa3.87□□□□□ -1.79
LINC00649-216ENST00000613667 DPY19L2P1Q6NXN4 242 aa3.87□□□□□ -1.79
LINC00649-216ENST00000613667 REC114Q7Z4M0 266 aa3.87□□□□□ -1.79
LINC00649-216ENST00000613667 STK32CQ86UX6 486 aa3.87□□□□□ -1.79
LINC00649-216ENST00000613667 TMEM192Q8IY95 271 aa3.87□□□□□ -1.79
LINC00649-216ENST00000613667 LCORQ96JN0 433 aaPredicted RBP3.87□□□□□ -1.79
LINC00649-216ENST00000613667 RHOVQ96L33 236 aa3.87□□□□□ -1.79
LINC00649-216ENST00000613667 FRMD6Q96NE9 622 aa3.87□□□□□ -1.79
LINC00649-216ENST00000613667 TRIM8Q9BZR9 551 aa3.87□□□□□ -1.79
LINC00649-216ENST00000613667 FBXL21Q9UKT6 434 aa3.87□□□□□ -1.79
LINC00649-216ENST00000613667 AK5Q9Y6K8 562 aa3.87□□□□□ -1.79
LINC00649-216ENST00000613667 A0A087X1B8 175 aa3.86□□□□□ -1.79
LINC00649-216ENST00000613667 DDX3XO00571 662 aaKnown RBP eCLIP3.86□□□□□ -1.79
LINC00649-216ENST00000613667 SHOXO15266 292 aa3.86□□□□□ -1.79
LINC00649-216ENST00000613667 ZNF202O95125 648 aa3.86□□□□□ -1.79
LINC00649-216ENST00000613667 GSNP06396 782 aa3.86□□□□□ -1.79
LINC00649-216ENST00000613667 RLBP1P12271 317 aa3.86□□□□□ -1.79
LINC00649-216ENST00000613667 MCM7P33993 719 aa3.86□□□□□ -1.79
LINC00649-216ENST00000613667 TRIM26Q12899 539 aaPredicted RBP3.86□□□□□ -1.79
LINC00649-216ENST00000613667 KRTAP15-1Q3LI76 137 aa3.86□□□□□ -1.79
LINC00649-216ENST00000613667 NLGN2Q8NFZ4 835 aa3.86□□□□□ -1.79
LINC00649-216ENST00000613667 ZG16BQ96DA0 208 aa3.86□□□□□ -1.79
LINC00649-216ENST00000613667 ASB16Q96NS5 453 aa3.86□□□□□ -1.79
LINC00649-216ENST00000613667 NOC4LQ9BVI4 516 aaKnown RBP3.86□□□□□ -1.79
LINC00649-216ENST00000613667 MKRN2Q9H000 416 aaKnown RBP3.86□□□□□ -1.79
LINC00649-216ENST00000613667 ZFR2Q9UPR6 939 aaKnown RBP3.86□□□□□ -1.79
LINC00649-216ENST00000613667 PCDHB12Q9Y5F1 795 aa3.86□□□□□ -1.79
LINC00649-216ENST00000613667 C9orf118A6NHY6 69 aa3.85□□□□□ -1.79
LINC00649-216ENST00000613667 KRTAP29-1A8MX34 341 aaPredicted RBP3.85□□□□□ -1.79
LINC00649-216ENST00000613667 H0Y8X5 98 aa3.85□□□□□ -1.79
LINC00649-216ENST00000613667 ZNF623O75123 536 aa3.85□□□□□ -1.79
LINC00649-216ENST00000613667 CYP2C8P10632 490 aa3.85□□□□□ -1.79
LINC00649-216ENST00000613667 RAD51AP2Q09MP3 1159 aa3.85□□□□□ -1.79
LINC00649-216ENST00000613667 AUHQ13825 339 aaKnown RBP3.85□□□□□ -1.79
LINC00649-216ENST00000613667 SLC9A5Q14940 896 aa3.85□□□□□ -1.79
LINC00649-216ENST00000613667 CYP2R1Q6VVX0 501 aa3.85□□□□□ -1.79
LINC00649-216ENST00000613667 USP48Q86UV5 1035 aa3.85□□□□□ -1.79
LINC00649-216ENST00000613667 ZSCAN29Q8IWY8 852 aaPredicted RBP3.85□□□□□ -1.79
LINC00649-216ENST00000613667 FAM26EQ8N5C1 309 aa3.85□□□□□ -1.79
LINC00649-216ENST00000613667 MBD6Q96DN6 1003 aa3.85□□□□□ -1.79
LINC00649-216ENST00000613667 ZNF503Q96F45 646 aa3.85□□□□□ -1.79
LINC00649-216ENST00000613667 SRRTQ9BXP5 876 aaKnown RBP3.85□□□□□ -1.79
LINC00649-216ENST00000613667 CNNM2Q9H8M5 875 aa3.85□□□□□ -1.79
LINC00649-216ENST00000613667 GMIPQ9P107 970 aa3.85□□□□□ -1.79
LINC00649-216ENST00000613667 PPP1R11O60927 126 aaPredicted RBP3.84□□□□□ -1.79
LINC00649-216ENST00000613667 EPHB4P54760 987 aa3.84□□□□□ -1.79
LINC00649-216ENST00000613667 FAM160A1Q05DH4 1040 aa3.84□□□□□ -1.79
LINC00649-216ENST00000613667 MPP2Q14168 576 aa3.84□□□□□ -1.79
LINC00649-216ENST00000613667 KYQ8NBH2 561 aa3.84□□□□□ -1.79
LINC00649-216ENST00000613667 Q8TCH9 128 aa3.84□□□□□ -1.79
LINC00649-216ENST00000613667 USP33Q8TEY7 942 aa3.84□□□□□ -1.79
LINC00649-216ENST00000613667 ATG4CQ96DT6 458 aa3.84□□□□□ -1.79
LINC00649-216ENST00000613667 PTCHD1Q96NR3 888 aa3.84□□□□□ -1.79
LINC00649-216ENST00000613667 TIMELESSQ9UNS1 1208 aa3.84□□□□□ -1.79
LINC00649-216ENST00000613667 SIT1Q9Y3P8 196 aa3.84□□□□□ -1.79
LINC00649-216ENST00000613667 RWDD3Q9Y3V2 267 aa3.84□□□□□ -1.79
LINC00649-216ENST00000613667 TLR3O15455 904 aaKnown RBP3.83□□□□□ -1.8
LINC00649-216ENST00000613667 NARSO43776 548 aaKnown RBP3.83□□□□□ -1.8
LINC00649-216ENST00000613667 IFNGR1P15260 489 aa3.83□□□□□ -1.8
LINC00649-216ENST00000613667 GARTP22102 1010 aa3.83□□□□□ -1.8
LINC00649-216ENST00000613667 L1CAMP32004 1257 aa3.83□□□□□ -1.8
LINC00649-216ENST00000613667 RNF207Q6ZRF8 634 aa3.83□□□□□ -1.8
LINC00649-216ENST00000613667 SLC6A18Q96N87 628 aa3.83□□□□□ -1.8
LINC00649-216ENST00000613667 FCRL3Q96P31 734 aaPredicted RBP3.83□□□□□ -1.8
LINC00649-216ENST00000613667 DSCC1Q9BVC3 393 aa3.83□□□□□ -1.8
LINC00649-216ENST00000613667 PRR13Q9NZ81 148 aa3.83□□□□□ -1.8
LINC00649-216ENST00000613667 NUDT5Q9UKK9 219 aa3.83□□□□□ -1.8
LINC00649-216ENST00000613667 PCDHB14Q9Y5E9 798 aa3.83□□□□□ -1.8
LINC00649-216ENST00000613667 ZBTB7AO95365 584 aa3.82□□□□□ -1.8
LINC00649-216ENST00000613667 ITGA1P56199 1179 aa3.82□□□□□ -1.8
LINC00649-216ENST00000613667 PPP2CBP62714 309 aa3.82□□□□□ -1.8
LINC00649-216ENST00000613667 PPP2CAP67775 309 aa3.82□□□□□ -1.8
LINC00649-216ENST00000613667 HS1BP3Q53T59 392 aa3.82□□□□□ -1.8
LINC00649-216ENST00000613667 SLFN13Q68D06 897 aa3.82□□□□□ -1.8
LINC00649-216ENST00000613667 ARHGEF18Q6ZSZ5 1173 aa3.82□□□□□ -1.8
LINC00649-216ENST00000613667 NLRC3Q7RTR2 1065 aa3.82□□□□□ -1.8
LINC00649-216ENST00000613667 CABP7Q86V35 215 aa3.82□□□□□ -1.8
LINC00649-216ENST00000613667 TTLL6Q8N841 843 aa3.82□□□□□ -1.8
LINC00649-216ENST00000613667 GOLM1Q8NBJ4 401 aa3.82□□□□□ -1.8
LINC00649-216ENST00000613667 NETO2Q8NC67 525 aa3.82□□□□□ -1.8
LINC00649-216ENST00000613667 PEX11GQ96HA9 241 aa3.82□□□□□ -1.8
LINC00649-216ENST00000613667 MEGF9Q9H1U4 602 aa3.82□□□□□ -1.8
LINC00649-216ENST00000613667 BRMS1Q9HCU9 246 aa3.82□□□□□ -1.8
LINC00649-216ENST00000613667 C9IYK1 514 aa3.81□□□□□ -1.8
LINC00649-216ENST00000613667 ATE1O95260 518 aa3.81□□□□□ -1.8
LINC00649-216ENST00000613667 CTSHP09668 335 aa3.81□□□□□ -1.8
LINC00649-216ENST00000613667 ZNF28P17035 718 aa3.81□□□□□ -1.8
LINC00649-216ENST00000613667 IL12RB1P42701 662 aa3.81□□□□□ -1.8
LINC00649-216ENST00000613667 ST13P50502 369 aaKnown RBP3.81□□□□□ -1.8
LINC00649-216ENST00000613667 DGCR2P98153 550 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms