RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 ALAS1P13196 640 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 GUCY2FP51841 1108 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 ALX1Q15699 326 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 MAN2A1Q16706 1144 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 CDAN1Q8IWY9 1227 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 ANKRD13CQ8N6S4 541 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 PANX2Q96RD6 677 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 N4BP1O75113 896 aaKnown RBP15.15■□□□□ 0.02
GGA3-220ENST00000613421 H2AFZP0C0S5 128 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 CYP19A1P11511 503 aaPredicted RBP15.15■□□□□ 0.02
GGA3-220ENST00000613421 ARID5BQ14865 1188 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 H2AFVQ71UI9 128 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 LARSQ9P2J5 1176 aaKnown RBP15.15■□□□□ 0.02
GGA3-220ENST00000613421 USTQ9Y2C2 406 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 GTF2A1P52655 376 aaPredicted RBP15.15■□□□□ 0.02
GGA3-220ENST00000613421 EXOC3L4Q17RC7 722 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 FAM102BQ5T8I3 360 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 STOX1Q6ZVD7 989 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 GPATCH11Q8N954 259 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 ZNF579Q8NAF0 562 aaKnown RBP15.15■□□□□ 0.02
GGA3-220ENST00000613421 COA7Q96BR5 231 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 THAP9Q9H5L6 903 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 AZI2Q9H6S1 392 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 MKRN1Q9UHC7 482 aaKnown RBP15.15■□□□□ 0.02
GGA3-220ENST00000613421 TESPA1A2RU30 521 aaPredicted RBP15.15■□□□□ 0.02
GGA3-220ENST00000613421 KRIT1O00522 736 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 ENC1O14682 589 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 PLCG1P19174 1290 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 CCNE1P24864 410 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 RCAN1P53805 252 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 TNFAIP1Q13829 316 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 KRT71Q3SY84 523 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 DCUN1D2Q6PH85 259 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 KRT26Q7Z3Y9 468 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 ACRBPQ8NEB7 543 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 GJA10Q969M2 543 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 MTA3Q9BTC8 594 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 COMMD10Q9Y6G5 202 aa15.15■□□□□ 0.02
GGA3-220ENST00000613421 CEP57Q86XR8 500 aa15.14■□□□□ 0.01
GGA3-220ENST00000613421 BPIFA3Q9BQP9 254 aa15.14■□□□□ 0.01
GGA3-220ENST00000613421 TNNI1P19237 187 aa15.14■□□□□ 0.01
GGA3-220ENST00000613421 RASSF7Q02833 373 aa15.14■□□□□ 0.01
GGA3-220ENST00000613421 PABPC4Q13310 644 aaKnown RBP eCLIP15.14■□□□□ 0.015e-10■■■■■ 57.7
GGA3-220ENST00000613421 CNKSR1Q969H4 720 aa15.14■□□□□ 0.01
GGA3-220ENST00000613421 SH3GLB2Q9NR46 395 aa15.14■□□□□ 0.01
GGA3-220ENST00000613421 TXNDC16Q9P2K2 825 aa15.14■□□□□ 0.01
GGA3-220ENST00000613421 NR2F2P24468 414 aa15.14■□□□□ 0.01
GGA3-220ENST00000613421 CDC27P30260 824 aa15.14■□□□□ 0.01
GGA3-220ENST00000613421 SLC16A2P36021 539 aa15.14■□□□□ 0.01
GGA3-220ENST00000613421 TRIM28Q13263 835 aaKnown RBP15.14■□□□□ 0.01
GGA3-220ENST00000613421 LRRC41Q15345 812 aa15.14■□□□□ 0.01
GGA3-220ENST00000613421 TAOK1Q7L7X3 1001 aa15.14■□□□□ 0.01
GGA3-220ENST00000613421 DISC1Q9NRI5 854 aa15.14■□□□□ 0.01
GGA3-220ENST00000613421 INPP5BP32019 993 aa15.14■□□□□ 0.01
GGA3-220ENST00000613421 MAIP1Q8WWC4 291 aa15.14■□□□□ 0.01
GGA3-220ENST00000613421 PLCB1Q9NQ66 1216 aa15.14■□□□□ 0.01
GGA3-220ENST00000613421 FAM170AA1A519 330 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 FKBP3Q00688 224 aaKnown RBP15.13■□□□□ 0.01
GGA3-220ENST00000613421 KANSL2Q9H9L4 492 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 MED4Q9NPJ6 270 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.13■□□□□ 0.01
GGA3-220ENST00000613421 CPDO75976 1380 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 ATP8B1O43520 1251 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 CDK8P49336 464 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 SCARF1Q14162 830 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 KMT5BQ4FZB7 885 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 ARHGEF16Q5VV41 709 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 POTEDQ86YR6 584 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 MCF2L2Q86YR7 1114 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 PARP2Q9UGN5 583 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 ZNF609O15014 1411 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 FERP16591 822 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 UAP1Q16222 522 aaPredicted RBP15.13■□□□□ 0.01
GGA3-220ENST00000613421 PPP2R5EQ16537 467 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 ZSCAN26Q16670 478 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 PTPROQ16827 1216 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 INTS8Q75QN2 995 aaKnown RBP15.13■□□□□ 0.01
GGA3-220ENST00000613421 SMC6Q96SB8 1091 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.13■□□□□ 0.01
GGA3-220ENST00000613421 CTNNA1P35221 906 aaKnown RBP15.13■□□□□ 0.01
GGA3-220ENST00000613421 EXOSC10Q01780 885 aaKnown RBP15.13■□□□□ 0.01
GGA3-220ENST00000613421 XKR9Q5GH70 373 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 FAM184BQ9ULE4 1060 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 MINPP1Q9UNW1 487 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 BZW2Q9Y6E2 419 aaKnown RBP15.13■□□□□ 0.01
GGA3-220ENST00000613421 UBN2Q6ZU65 1347 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 KRT31Q15323 416 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 FAM182BQ5T319 152 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 LRCH2Q5VUJ6 765 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 DENND2CQ68D51 928 aa15.13■□□□□ 0.01
GGA3-220ENST00000613421 GOLGA8KD6RF30 607 aa15.12■□□□□ 0.01
GGA3-220ENST00000613421 SEC31AO94979 1220 aaKnown RBP15.12■□□□□ 0.01
GGA3-220ENST00000613421 ZBED6P86452 979 aa15.12■□□□□ 0.01
GGA3-220ENST00000613421 GNPTABQ3T906 1256 aa15.12■□□□□ 0.01
GGA3-220ENST00000613421 TCP11X2Q5H9J9 407 aa15.12■□□□□ 0.01
GGA3-220ENST00000613421 ZNF354CQ86Y25 554 aa15.12■□□□□ 0.01
GGA3-220ENST00000613421 ENAHQ8N8S7 591 aaPredicted RBP15.12■□□□□ 0.01
GGA3-220ENST00000613421 FAM71BQ8TC56 605 aa15.12■□□□□ 0.01
GGA3-220ENST00000613421 FRMPD1Q5SYB0 1578 aa15.12■□□□□ 0.01
GGA3-220ENST00000613421 CYP2D6P10635 497 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms