RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 IPO11Q9UI26 975 aaKnown RBP9.52□□□□□ -0.89
TTC28-208ENST00000612946 ARL2BPQ9Y2Y0 163 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 CRLF3Q8IUI8 442 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 PRAM1Q96QH2 718 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 TTC1Q99614 292 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 RIOK1Q9BRS2 568 aaKnown RBP9.52□□□□□ -0.89
TTC28-208ENST00000612946 VPS16Q9H269 839 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 TFAP4Q01664 338 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 ART3Q13508 389 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 FRA10AC1Q70Z53 315 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 RNF169Q8NCN4 708 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 KAT6AQ92794 2004 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 ABCB6Q9NP58 842 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 SNX5Q9Y5X3 404 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 CCDC78A2IDD5 438 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 C16orf96A6NNT2 1141 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 DTNBO60941 627 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 PDHA1P08559 390 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 PPP2R5DQ14738 602 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 ZNF274Q96GC6 653 aaPredicted RBP9.51□□□□□ -0.89
TTC28-208ENST00000612946 DESI2Q9BSY9 194 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 ADKP55263 362 aaKnown RBP9.51□□□□□ -0.89
TTC28-208ENST00000612946 NCAPH2Q6IBW4 605 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 IQANK1A0A1B0GTG1 560 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 VWA3AA6NCI4 1184 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 RSPH10B2B2RC85 870 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 ABLIM1O14639 778 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 XPO1O14980 1071 aaKnown RBP9.51□□□□□ -0.89
TTC28-208ENST00000612946 RSPH10BP0C881 870 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 KCNA3P22001 575 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 NONOQ15233 471 aaKnown RBP eCLIP9.51□□□□□ -0.89
TTC28-208ENST00000612946 GIPC2Q8TF65 315 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 BRIP1Q9BX63 1249 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 NR1I2O75469 434 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 RNF207Q6ZRF8 634 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 CDC5LQ99459 802 aaKnown RBP9.51□□□□□ -0.89
TTC28-208ENST00000612946 DISP3Q9P2K9 1392 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 LIN7AO14910 233 aaPredicted RBP9.51□□□□□ -0.89
TTC28-208ENST00000612946 CCDC22O60826 627 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 MSH2P43246 934 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 RAD23BP54727 409 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 PDE4DQ08499 809 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 DNAL1Q4LDG9 190 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 CDC37L1Q7L3B6 337 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 PSPC1Q8WXF1 523 aaKnown RBP9.51□□□□□ -0.89
TTC28-208ENST00000612946 RAB20Q9NX57 234 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 MBD2Q9UBB5 411 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 SPDYE3A6NKU9 549 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 PFKFB2O60825 505 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 CNGA3Q16281 694 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 RRAGAQ7L523 313 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 DNAJC9Q8WXX5 260 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 MTBPQ96DY7 904 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 RBM42Q9BTD8 480 aaKnown RBP9.51□□□□□ -0.89
TTC28-208ENST00000612946 ING2Q9H160 280 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 TCOF1Q13428 1488 aaKnown RBP9.51□□□□□ -0.89
TTC28-208ENST00000612946 POGZQ7Z3K3 1410 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 H0YC42 278 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 ECEL1O95672 775 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 ABCD1P33897 745 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 PSMC1P62191 440 aaKnown RBP9.51□□□□□ -0.89
TTC28-208ENST00000612946 PITPNM3Q9BZ71 974 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 EHD2Q9NZN4 543 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 E2F6O75461 281 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 C1orf146Q5VVC0 180 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 TBC1D1Q86TI0 1168 aaPredicted RBP9.51□□□□□ -0.89
TTC28-208ENST00000612946 H0YCG3 227 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 TMEM259Q4ZIN3 620 aa9.51□□□□□ -0.89
TTC28-208ENST00000612946 THUMPD2Q9BTF0 503 aaKnown RBP9.51□□□□□ -0.89
TTC28-208ENST00000612946 NT5C2P49902 561 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 GAS2L3Q86XJ1 694 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 CNBD2Q96M20 576 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 ABCC12Q96J65 1359 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 SLC27A2O14975 620 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 TRPA1O75762 1119 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 HOXB7P09629 217 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 S100A5P33763 92 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 RAB14P61106 215 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 CUL4BQ13620 913 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 TTC38Q5R3I4 469 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 KRT25Q7Z3Z0 450 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 TUBGCP3Q96CW5 907 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 AATFQ9NY61 560 aaKnown RBP eCLIP9.5□□□□□ -0.89
TTC28-208ENST00000612946 GGCXP38435 758 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 TRAPPC10P48553 1259 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 ANKLE2Q86XL3 938 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 OPTNQ96CV9 577 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 KDM5CP41229 1560 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 ENOX1Q8TC92 643 aaKnown RBP9.5□□□□□ -0.89
TTC28-208ENST00000612946 C19orf44Q9H6X5 657 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 IFT122Q9HBG6 1241 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 EPB41L5Q9HCM4 733 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 ECT2Q9H8V3 914 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 TMOD4Q9NZQ9 345 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 CABP1Q9NZU7 370 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 ZFATQ9P243 1243 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 ZNF229Q9UJW7 825 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 YEATS2Q9ULM3 1422 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 RAPGEF6Q8TEU7 1601 aa9.5□□□□□ -0.89
TTC28-208ENST00000612946 SYCE1LA8MT33 242 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms