RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 PTPDC1A2A3K4 754 aa10.1□□□□□ -0.79
SNCA-212ENST00000611107 TRIM43BA6NCK2 446 aa10.1□□□□□ -0.79
SNCA-212ENST00000611107 KLRF2D3W0D1 207 aa10.1□□□□□ -0.79
SNCA-212ENST00000611107 SH2B2O14492 632 aaPredicted RBP10.1□□□□□ -0.79
SNCA-212ENST00000611107 PRC1O43663 620 aa10.1□□□□□ -0.79
SNCA-212ENST00000611107 MSCO60682 206 aa10.1□□□□□ -0.79
SNCA-212ENST00000611107 ARIH2O95376 493 aa10.1□□□□□ -0.79
SNCA-212ENST00000611107 PLEKHA8P1O95397 391 aa10.1□□□□□ -0.79
SNCA-212ENST00000611107 PARP1P09874 1014 aaKnown RBP10.1□□□□□ -0.79
SNCA-212ENST00000611107 AKR1A1P14550 325 aa10.1□□□□□ -0.79
SNCA-212ENST00000611107 MAGEA10P43363 369 aaPredicted RBP10.1□□□□□ -0.79
SNCA-212ENST00000611107 ALDH5A1P51649 535 aaPredicted RBP10.1□□□□□ -0.79
SNCA-212ENST00000611107 KCNA10Q16322 511 aa10.1□□□□□ -0.79
SNCA-212ENST00000611107 ASPRV1Q53RT3 343 aa10.1□□□□□ -0.79
SNCA-212ENST00000611107 TMEM67Q5HYA8 995 aa10.1□□□□□ -0.79
SNCA-212ENST00000611107 GPATCH4Q5T3I0 446 aaKnown RBP10.1□□□□□ -0.79
SNCA-212ENST00000611107 CMTR1Q8N1G2 835 aaKnown RBP10.1□□□□□ -0.79
SNCA-212ENST00000611107 MSL3Q8N5Y2 521 aaKnown RBP10.1□□□□□ -0.79
SNCA-212ENST00000611107 PIBF1Q8WXW3 757 aa10.1□□□□□ -0.79
SNCA-212ENST00000611107 COPS5Q92905 334 aa10.1□□□□□ -0.79
SNCA-212ENST00000611107 TRIM43Q96BQ3 446 aaPredicted RBP10.1□□□□□ -0.79
SNCA-212ENST00000611107 ZFP91Q96JP5 570 aaPredicted RBP10.1□□□□□ -0.79
SNCA-212ENST00000611107 PIGSQ96S52 555 aa10.1□□□□□ -0.79
SNCA-212ENST00000611107 UPF3AQ9H1J1 476 aaKnown RBP10.1□□□□□ -0.79
SNCA-212ENST00000611107 NRBP1Q9UHY1 535 aa10.1□□□□□ -0.79
SNCA-212ENST00000611107 FAM184BQ9ULE4 1060 aa10.1□□□□□ -0.79
SNCA-212ENST00000611107 A0A1W2PQ45 241 aaPredicted RBP10.09□□□□□ -0.79
SNCA-212ENST00000611107 A0A1W2PQY0 241 aa10.09□□□□□ -0.79
SNCA-212ENST00000611107 hCG_1642624A0A1W2PR95 340 aa10.09□□□□□ -0.79
SNCA-212ENST00000611107 RARBP10826 455 aa10.09□□□□□ -0.79
SNCA-212ENST00000611107 EDNRBP24530 442 aa10.09□□□□□ -0.79
SNCA-212ENST00000611107 MCM5P33992 734 aa10.09□□□□□ -0.79
SNCA-212ENST00000611107 KRT32Q14532 448 aa10.09□□□□□ -0.79
SNCA-212ENST00000611107 WTAPQ15007 396 aa10.09□□□□□ -0.79
SNCA-212ENST00000611107 SNX17Q15036 470 aa10.09□□□□□ -0.79
SNCA-212ENST00000611107 CCDC178Q5BJE1 867 aa10.09□□□□□ -0.79
SNCA-212ENST00000611107 SYTL5Q8TDW5 730 aaPredicted RBP10.09□□□□□ -0.79
SNCA-212ENST00000611107 JAKMIP1Q96N16 626 aaKnown RBP10.09□□□□□ -0.79
SNCA-212ENST00000611107 ABHD16BQ9H3Z7 469 aa10.09□□□□□ -0.79
SNCA-212ENST00000611107 RIOX1Q9H6W3 641 aa10.09□□□□□ -0.79
SNCA-212ENST00000611107 CNPY2Q9Y2B0 182 aa10.09□□□□□ -0.79
SNCA-212ENST00000611107 ATP11BQ9Y2G3 1177 aa10.09□□□□□ -0.79
SNCA-212ENST00000611107 GRIN2DO15399 1336 aa10.08□□□□□ -0.8
SNCA-212ENST00000611107 TRIP12Q14669 1992 aaPredicted RBP10.08□□□□□ -0.8
SNCA-212ENST00000611107 WDR81Q562E7 1941 aa10.08□□□□□ -0.8
SNCA-212ENST00000611107 KBTBD13C9JR72 458 aa10.08□□□□□ -0.8
SNCA-212ENST00000611107 DUSP11O75319 330 aaKnown RBP10.08□□□□□ -0.8
SNCA-212ENST00000611107 SLC34A2O95436 690 aa10.08□□□□□ -0.8
SNCA-212ENST00000611107 CAPN2P17655 700 aa10.08□□□□□ -0.8
SNCA-212ENST00000611107 ACLYP53396 1101 aa10.08□□□□□ -0.8
SNCA-212ENST00000611107 GJA9P57773 515 aa10.08□□□□□ -0.8
SNCA-212ENST00000611107 MDM2Q00987 491 aaPredicted RBP10.08□□□□□ -0.8
SNCA-212ENST00000611107 EXOSC10Q01780 885 aaKnown RBP10.08□□□□□ -0.8
SNCA-212ENST00000611107 RNF207Q6ZRF8 634 aa10.08□□□□□ -0.8
SNCA-212ENST00000611107 FBXO11Q86XK2 927 aa10.08□□□□□ -0.8
SNCA-212ENST00000611107 HOMER1Q86YM7 354 aa10.08□□□□□ -0.8
SNCA-212ENST00000611107 ZNF654Q8IZM8 581 aa10.08□□□□□ -0.8
SNCA-212ENST00000611107 SRBD1Q8N5C6 995 aaKnown RBP10.08□□□□□ -0.8
SNCA-212ENST00000611107 ARRDC4Q8NCT1 418 aa10.08□□□□□ -0.8
SNCA-212ENST00000611107 IL31RAQ8NI17 732 aa10.08□□□□□ -0.8
SNCA-212ENST00000611107 IL17RAQ96F46 866 aa10.08□□□□□ -0.8
SNCA-212ENST00000611107 NEK1Q96PY6 1258 aa10.08□□□□□ -0.8
SNCA-212ENST00000611107 PDLIM7Q9NR12 457 aa10.08□□□□□ -0.8
SNCA-212ENST00000611107 BRPF3Q9ULD4 1205 aa10.08□□□□□ -0.8
SNCA-212ENST00000611107 NR2E3Q9Y5X4 410 aa10.08□□□□□ -0.8
SNCA-212ENST00000611107 SCN10AQ9Y5Y9 1956 aa10.08□□□□□ -0.8
SNCA-212ENST00000611107 RBM47A0AV96 593 aaKnown RBP10.07□□□□□ -0.8
SNCA-212ENST00000611107 ADAMTS3O15072 1205 aa10.07□□□□□ -0.8
SNCA-212ENST00000611107 RGS20O76081 388 aa10.07□□□□□ -0.8
SNCA-212ENST00000611107 ASGR1P07306 291 aa10.07□□□□□ -0.8
SNCA-212ENST00000611107 C6orf222P0C671 652 aaPredicted RBP10.07□□□□□ -0.8
SNCA-212ENST00000611107 CASTP20810 708 aaKnown RBP10.07□□□□□ -0.8
SNCA-212ENST00000611107 CST5P28325 142 aaPredicted RBP10.07□□□□□ -0.8
SNCA-212ENST00000611107 HOXA13P31271 388 aaPredicted RBP10.07□□□□□ -0.8
SNCA-212ENST00000611107 EPHB4P54760 987 aa10.07□□□□□ -0.8
SNCA-212ENST00000611107 NKX3-2P78367 333 aa10.07□□□□□ -0.8
SNCA-212ENST00000611107 TNFAIP2Q03169 654 aa10.07□□□□□ -0.8
SNCA-212ENST00000611107 TLE2Q04725 743 aa10.07□□□□□ -0.8
SNCA-212ENST00000611107 SART3Q15020 963 aaKnown RBP10.07□□□□□ -0.8
SNCA-212ENST00000611107 NUP133Q8WUM0 1156 aa10.07□□□□□ -0.8
SNCA-212ENST00000611107 GPKOWQ92917 476 aaPredicted RBP eCLIP10.07□□□□□ -0.8
SNCA-212ENST00000611107 LRCH3Q96II8 777 aa10.07□□□□□ -0.8
SNCA-212ENST00000611107 TMEM87BQ96K49 555 aa10.07□□□□□ -0.8
SNCA-212ENST00000611107 MTA3Q9BTC8 594 aa10.07□□□□□ -0.8
SNCA-212ENST00000611107 BCAS3Q9H6U6 928 aa10.07□□□□□ -0.8
SNCA-212ENST00000611107 FAM217BQ9NTX9 383 aaPredicted RBP10.07□□□□□ -0.8
SNCA-212ENST00000611107 TELO2Q9Y4R8 837 aa10.07□□□□□ -0.8
SNCA-212ENST00000611107 ABCB11O95342 1321 aa10.07□□□□□ -0.8
SNCA-212ENST00000611107 SCN5AQ14524 2016 aa10.06□□□□□ -0.8
SNCA-212ENST00000611107 MYH15Q9Y2K3 1946 aa10.06□□□□□ -0.8
SNCA-212ENST00000611107 ASB14A6NK59 587 aa10.06□□□□□ -0.8
SNCA-212ENST00000611107 ZBTB5O15062 677 aa10.06□□□□□ -0.8
SNCA-212ENST00000611107 DYNC1LI2O43237 492 aaPredicted RBP10.06□□□□□ -0.8
SNCA-212ENST00000611107 DHX16O60231 1041 aaKnown RBP10.06□□□□□ -0.8
SNCA-212ENST00000611107 RPS6KB1P23443 525 aa10.06□□□□□ -0.8
SNCA-212ENST00000611107 CDK7P50613 346 aa10.06□□□□□ -0.8
SNCA-212ENST00000611107 HSD17B4P51659 736 aa10.06□□□□□ -0.8
SNCA-212ENST00000611107 ANAPC15P60006 121 aa10.06□□□□□ -0.8
SNCA-212ENST00000611107 PSMC6P62333 389 aa10.06□□□□□ -0.8
SNCA-212ENST00000611107 CXCL17Q6UXB2 119 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms