RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 PARP1P09874 1014 aaKnown RBP17.88■□□□□ 0.45
RTN1-209ENST00000611068 SLC16A2P36021 539 aa17.88■□□□□ 0.45
RTN1-209ENST00000611068 JAKMIP3Q5VZ66 844 aa17.88■□□□□ 0.45
RTN1-209ENST00000611068 MIGA2Q7L4E1 593 aa17.88■□□□□ 0.45
RTN1-209ENST00000611068 MAP3K14Q99558 947 aa17.88■□□□□ 0.45
RTN1-209ENST00000611068 PHF20Q9BVI0 1012 aa17.88■□□□□ 0.45
RTN1-209ENST00000611068 VIL1P09327 827 aaKnown RBP17.87■□□□□ 0.45
RTN1-209ENST00000611068 JAG1P78504 1218 aa17.87■□□□□ 0.45
RTN1-209ENST00000611068 PPP2R5BQ15173 497 aa17.87■□□□□ 0.45
RTN1-209ENST00000611068 NBPF9Q3BBW0 867 aa17.87■□□□□ 0.45
RTN1-209ENST00000611068 PRPF38AQ8NAV1 312 aaKnown RBP17.87■□□□□ 0.45
RTN1-209ENST00000611068 FAM71BQ8TC56 605 aa17.87■□□□□ 0.45
RTN1-209ENST00000611068 CSRNP1Q96S65 589 aa17.87■□□□□ 0.45
RTN1-209ENST00000611068 GJA3Q9Y6H8 435 aa17.87■□□□□ 0.45
RTN1-209ENST00000611068 MYH6P13533 1939 aa17.87■□□□□ 0.45
RTN1-209ENST00000611068 TOP1P11387 765 aaKnown RBP17.87■□□□□ 0.45
RTN1-209ENST00000611068 XBP1P17861 261 aa17.87■□□□□ 0.45
RTN1-209ENST00000611068 KRT2P35908 639 aa17.87■□□□□ 0.45
RTN1-209ENST00000611068 NEDD9Q14511 834 aa17.87■□□□□ 0.45
RTN1-209ENST00000611068 TTBK2Q6IQ55 1244 aa17.87■□□□□ 0.45
RTN1-209ENST00000611068 CCDC73Q6ZRK6 1079 aa17.87■□□□□ 0.45
RTN1-209ENST00000611068 PIK3AP1Q6ZUJ8 805 aa17.87■□□□□ 0.45
RTN1-209ENST00000611068 KCTD1Q719H9 257 aa17.87■□□□□ 0.45
RTN1-209ENST00000611068 HOMEZQ8IX15 550 aa17.87■□□□□ 0.45
RTN1-209ENST00000611068 ZNF526Q8TF50 670 aaPredicted RBP17.87■□□□□ 0.45
RTN1-209ENST00000611068 JDP2Q8WYK2 163 aa17.87■□□□□ 0.45
RTN1-209ENST00000611068 ANKS1AQ92625 1134 aa17.87■□□□□ 0.45
RTN1-209ENST00000611068 RABEP2Q9H5N1 569 aa17.87■□□□□ 0.45
RTN1-209ENST00000611068 CERKLQ49MI3 558 aaPredicted RBP17.86■□□□□ 0.45
RTN1-209ENST00000611068 HSP90B2PQ58FF3 399 aa17.86■□□□□ 0.45
RTN1-209ENST00000611068 HNRNPLLQ8WVV9 542 aaKnown RBP17.86■□□□□ 0.45
RTN1-209ENST00000611068 PI4KBQ9UBF8 816 aa17.86■□□□□ 0.45
RTN1-209ENST00000611068 SPDYE2BA6NHP3 402 aa17.86■□□□□ 0.45
RTN1-209ENST00000611068 MYO1FO00160 1098 aa17.86■□□□□ 0.45
RTN1-209ENST00000611068 SPDYE6P0CI01 402 aa17.86■□□□□ 0.45
RTN1-209ENST00000611068 CALRP27797 417 aaKnown RBP17.86■□□□□ 0.45
RTN1-209ENST00000611068 TBC1D8BQ0IIM8 1120 aa17.86■□□□□ 0.45
RTN1-209ENST00000611068 RRP1BQ14684 758 aaKnown RBP17.86■□□□□ 0.45
RTN1-209ENST00000611068 CASP8Q14790 479 aa17.86■□□□□ 0.45
RTN1-209ENST00000611068 SEPT2Q15019 361 aa17.86■□□□□ 0.45
RTN1-209ENST00000611068 SLC39A14Q15043 492 aa17.86■□□□□ 0.45
RTN1-209ENST00000611068 ZNF174Q15697 407 aa17.86■□□□□ 0.45
RTN1-209ENST00000611068 NPY5RQ15761 445 aa17.86■□□□□ 0.45
RTN1-209ENST00000611068 PTPN21Q16825 1174 aa17.86■□□□□ 0.45
RTN1-209ENST00000611068 PFKFB3Q16875 520 aaPredicted RBP17.86■□□□□ 0.45
RTN1-209ENST00000611068 ZKSCAN4Q969J2 545 aaPredicted RBP17.86■□□□□ 0.45
RTN1-209ENST00000611068 TMEM39BQ9GZU3 492 aa17.86■□□□□ 0.45
RTN1-209ENST00000611068 A1CFQ9NQ94 594 aaKnown RBP17.86■□□□□ 0.45
RTN1-209ENST00000611068 PALM3A6NDB9 673 aaPredicted RBP17.85■□□□□ 0.45
RTN1-209ENST00000611068 PTGER2P43116 358 aa17.85■□□□□ 0.45
RTN1-209ENST00000611068 PRELPP51888 382 aa17.85■□□□□ 0.45
RTN1-209ENST00000611068 PTPAQ15257 358 aa17.85■□□□□ 0.45
RTN1-209ENST00000611068 KCNG4Q8TDN1 519 aa17.85■□□□□ 0.45
RTN1-209ENST00000611068 PIGSQ96S52 555 aa17.85■□□□□ 0.45
RTN1-209ENST00000611068 FAM107BQ9H098 131 aa17.85■□□□□ 0.45
RTN1-209ENST00000611068 FOXP1Q9H334 677 aaPredicted RBP17.85■□□□□ 0.45
RTN1-209ENST00000611068 MYH15Q9Y2K3 1946 aa17.85■□□□□ 0.45
RTN1-209ENST00000611068 CCP110O43303 1012 aa17.85■□□□□ 0.45
RTN1-209ENST00000611068 NRDCO43847 1150 aa17.85■□□□□ 0.45
RTN1-209ENST00000611068 PDHBP11177 359 aa17.85■□□□□ 0.45
RTN1-209ENST00000611068 FKBP1AP62942 108 aaKnown RBP17.85■□□□□ 0.45
RTN1-209ENST00000611068 ATL3Q6DD88 541 aa17.85■□□□□ 0.45
RTN1-209ENST00000611068 ADALQ6DHV7 355 aa17.85■□□□□ 0.45
RTN1-209ENST00000611068 CEP57L1Q8IYX8 460 aa17.85■□□□□ 0.45
RTN1-209ENST00000611068 MRPS27Q92552 414 aaKnown RBP17.85■□□□□ 0.45
RTN1-209ENST00000611068 IDI2Q9BXS1 227 aa17.85■□□□□ 0.45
RTN1-209ENST00000611068 ZNF70Q9UC06 446 aaPredicted RBP17.85■□□□□ 0.45
RTN1-209ENST00000611068 PUF60Q9UHX1 559 aaKnown RBP17.85■□□□□ 0.45
RTN1-209ENST00000611068 YEATS4O95619 227 aa17.85■□□□□ 0.45
RTN1-209ENST00000611068 HDLBPQ00341 1268 aaKnown RBP17.85■□□□□ 0.45
RTN1-209ENST00000611068 CCDC96Q2M329 555 aa17.85■□□□□ 0.45
RTN1-209ENST00000611068 KIFC2Q96AC6 838 aa17.85■□□□□ 0.45
RTN1-209ENST00000611068 GMLQ99445 158 aa17.85■□□□□ 0.45
RTN1-209ENST00000611068 ANO10Q9NW15 660 aa17.85■□□□□ 0.45
RTN1-209ENST00000611068 DLEC1Q9Y238 1755 aa17.84■□□□□ 0.45
RTN1-209ENST00000611068 LRRIQ3A6PVS8 624 aaPredicted RBP17.84■□□□□ 0.45
RTN1-209ENST00000611068 RNF40O75150 1001 aa17.84■□□□□ 0.45
RTN1-209ENST00000611068 TTLL1O95922 423 aa17.84■□□□□ 0.45
RTN1-209ENST00000611068 CCNHP51946 323 aaPredicted RBP17.84■□□□□ 0.45
RTN1-209ENST00000611068 SNAP25P60880 206 aa17.84■□□□□ 0.45
RTN1-209ENST00000611068 NUP88Q99567 741 aaPredicted RBP17.84■□□□□ 0.45
RTN1-209ENST00000611068 ASTN2O75129 1339 aaPredicted RBP17.84■□□□□ 0.45
RTN1-209ENST00000611068 EEF2P13639 858 aaKnown RBP17.84■□□□□ 0.45
RTN1-209ENST00000611068 GCFC2P16383 781 aaKnown RBP17.84■□□□□ 0.45
RTN1-209ENST00000611068 CCDC178Q5BJE1 867 aa17.84■□□□□ 0.45
RTN1-209ENST00000611068 SGIP1Q9BQI5 828 aa17.84■□□□□ 0.45
RTN1-209ENST00000611068 MRIQ9BWK5 157 aa17.84■□□□□ 0.45
RTN1-209ENST00000611068 EHD4Q9H223 541 aa17.84■□□□□ 0.45
RTN1-209ENST00000611068 SWAP70Q9UH65 585 aa17.84■□□□□ 0.45
RTN1-209ENST00000611068 HDAC9Q9UKV0 1011 aa17.84■□□□□ 0.45
RTN1-209ENST00000611068 CAPN7Q9Y6W3 813 aa17.84■□□□□ 0.45
RTN1-209ENST00000611068 KINO60870 393 aaKnown RBP17.83■□□□□ 0.44
RTN1-209ENST00000611068 GH2P01242 217 aa17.83■□□□□ 0.44
RTN1-209ENST00000611068 INPP5BP32019 993 aa17.83■□□□□ 0.44
RTN1-209ENST00000611068 CHMP4BP1P59074 171 aa17.83■□□□□ 0.44
RTN1-209ENST00000611068 SETQ01105 290 aaPredicted RBP17.83■□□□□ 0.44
RTN1-209ENST00000611068 SHC4Q6S5L8 630 aa17.83■□□□□ 0.44
RTN1-209ENST00000611068 SAMD7Q7Z3H4 446 aa17.83■□□□□ 0.44
RTN1-209ENST00000611068 CCDC84Q86UT8 332 aaPredicted RBP17.83■□□□□ 0.44
RTN1-209ENST00000611068 AFAP1L1Q8TED9 768 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms