RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 SPDYE3A6NKU9 549 aa24.45■■□□□ 1.5
USP6NL-204ENST00000606752 POTECB2RU33 542 aa24.45■■□□□ 1.5
USP6NL-204ENST00000606752 ACTN4O43707 911 aaKnown RBP24.45■■□□□ 1.5
USP6NL-204ENST00000606752 CAVIN2O95810 425 aa24.45■■□□□ 1.5
USP6NL-204ENST00000606752 HMGCS2P54868 508 aa24.45■■□□□ 1.5
USP6NL-204ENST00000606752 STX1AQ16623 288 aa24.45■■□□□ 1.5
USP6NL-204ENST00000606752 UVSSAQ2YD98 709 aa24.45■■□□□ 1.5
USP6NL-204ENST00000606752 ANO6Q4KMQ2 910 aa24.45■■□□□ 1.5
USP6NL-204ENST00000606752 PNMA8AQ86V59 439 aaPredicted RBP24.45■■□□□ 1.5
USP6NL-204ENST00000606752 POTEDQ86YR6 584 aa24.45■■□□□ 1.5
USP6NL-204ENST00000606752 CDCA5Q96FF9 252 aa24.45■■□□□ 1.5
USP6NL-204ENST00000606752 USP25Q9UHP3 1055 aa24.45■■□□□ 1.5
USP6NL-204ENST00000606752 CSADQ9Y600 493 aa24.45■■□□□ 1.5
USP6NL-204ENST00000606752 FDX1P10109 184 aa24.45■■□□□ 1.5
USP6NL-204ENST00000606752 TXLNAP40222 546 aa24.45■■□□□ 1.5
USP6NL-204ENST00000606752 MDM2Q00987 491 aaPredicted RBP24.45■■□□□ 1.5
USP6NL-204ENST00000606752 CALCRLQ16602 461 aa24.45■■□□□ 1.5
USP6NL-204ENST00000606752 EAPPQ56P03 285 aaPredicted RBP24.45■■□□□ 1.5
USP6NL-204ENST00000606752 RBM46Q8TBY0 533 aaKnown RBP24.45■■□□□ 1.5
USP6NL-204ENST00000606752 CCDC34Q96HJ3 373 aa24.45■■□□□ 1.5
USP6NL-204ENST00000606752 AK8Q96MA6 479 aa24.45■■□□□ 1.5
USP6NL-204ENST00000606752 P2RX7Q99572 595 aaKnown RBP24.45■■□□□ 1.5
USP6NL-204ENST00000606752 SLC38A10Q9HBR0 1119 aa24.45■■□□□ 1.5
USP6NL-204ENST00000606752 ANO10Q9NW15 660 aa24.45■■□□□ 1.5
USP6NL-204ENST00000606752 ZNF536O15090 1300 aa24.44■■□□□ 1.5
USP6NL-204ENST00000606752 SLC37A4O43826 429 aa24.44■■□□□ 1.5
USP6NL-204ENST00000606752 FAM200AQ8TCP9 573 aa24.44■■□□□ 1.5
USP6NL-204ENST00000606752 DHX58Q96C10 678 aa24.44■■□□□ 1.5
USP6NL-204ENST00000606752 TMOD4Q9NZQ9 345 aa24.44■■□□□ 1.5
USP6NL-204ENST00000606752 CCPG1Q9ULG6 757 aa24.44■■□□□ 1.5
USP6NL-204ENST00000606752 GCOM1H8Y6P7 765 aaPredicted RBP24.43■■□□□ 1.5
USP6NL-204ENST00000606752 SLFN14P0C7P3 912 aa24.43■■□□□ 1.5
USP6NL-204ENST00000606752 POLR2MP0CAP2 368 aa24.43■■□□□ 1.5
USP6NL-204ENST00000606752 HOXA13P31271 388 aaPredicted RBP24.43■■□□□ 1.5
USP6NL-204ENST00000606752 ZRSR1Q15695 479 aaKnown RBP24.43■■□□□ 1.5
USP6NL-204ENST00000606752 MOXD1Q6UVY6 613 aa24.43■■□□□ 1.5
USP6NL-204ENST00000606752 CRYGNQ8WXF5 182 aa24.43■■□□□ 1.5
USP6NL-204ENST00000606752 ANP32BQ92688 251 aaKnown RBP24.43■■□□□ 1.5
USP6NL-204ENST00000606752 AGBL1Q96MI9 1066 aa24.43■■□□□ 1.5
USP6NL-204ENST00000606752 DDX25Q9UHL0 483 aaKnown RBP24.43■■□□□ 1.5
USP6NL-204ENST00000606752 TUBE1Q9UJT0 475 aa24.43■■□□□ 1.5
USP6NL-204ENST00000606752 PNMA2Q9UL42 364 aa24.43■■□□□ 1.5
USP6NL-204ENST00000606752 CYP3A7-CYP3A51PA0A087WV96 503 aa24.42■■□□□ 1.5
USP6NL-204ENST00000606752 CFBP00751 764 aa24.42■■□□□ 1.5
USP6NL-204ENST00000606752 CYP3A7P24462 503 aa24.42■■□□□ 1.5
USP6NL-204ENST00000606752 SREBF1P36956 1147 aa24.42■■□□□ 1.5
USP6NL-204ENST00000606752 ARHGAP4P98171 946 aa24.42■■□□□ 1.5
USP6NL-204ENST00000606752 PNOCQ13519 176 aa24.42■■□□□ 1.5
USP6NL-204ENST00000606752 IQUBQ8NA54 791 aa24.42■■□□□ 1.5
USP6NL-204ENST00000606752 CCSER1Q9C0I3 900 aa24.42■■□□□ 1.5
USP6NL-204ENST00000606752 ZBED4O75132 1171 aa24.42■■□□□ 1.5
USP6NL-204ENST00000606752 SH3D19Q5HYK7 790 aa24.42■■□□□ 1.5
USP6NL-204ENST00000606752 CEP57L1Q8IYX8 460 aa24.42■■□□□ 1.5
USP6NL-204ENST00000606752 TBC1D5Q92609 795 aa24.42■■□□□ 1.5
USP6NL-204ENST00000606752 DNAJC25Q9H1X3 360 aa24.42■■□□□ 1.5
USP6NL-204ENST00000606752 SCN4AP35499 1836 aa24.41■■□□□ 1.5
USP6NL-204ENST00000606752 CDC25AP30304 524 aa24.41■■□□□ 1.5
USP6NL-204ENST00000606752 UBA7P41226 1012 aa24.41■■□□□ 1.5
USP6NL-204ENST00000606752 TXKP42681 527 aa24.41■■□□□ 1.5
USP6NL-204ENST00000606752 POSTNQ15063 836 aa24.41■■□□□ 1.5
USP6NL-204ENST00000606752 CTDP1Q9Y5B0 961 aaPredicted RBP24.41■■□□□ 1.5
USP6NL-204ENST00000606752 FOXN1O15353 648 aa24.4■■□□□ 1.5
USP6NL-204ENST00000606752 TECP42680 631 aa24.4■■□□□ 1.5
USP6NL-204ENST00000606752 ZNF165P49910 485 aa24.4■■□□□ 1.5
USP6NL-204ENST00000606752 E2F4Q16254 413 aa24.4■■□□□ 1.5
USP6NL-204ENST00000606752 ANKRD13AQ8IZ07 590 aa24.4■■□□□ 1.5
USP6NL-204ENST00000606752 IGSF22Q8N9C0 903 aa24.4■■□□□ 1.5
USP6NL-204ENST00000606752 MBOAT7Q96N66 472 aa24.4■■□□□ 1.5
USP6NL-204ENST00000606752 VWA5AO00534 786 aa24.4■■□□□ 1.5
USP6NL-204ENST00000606752 FXR2P51116 673 aaKnown RBP eCLIP24.4■■□□□ 1.5
USP6NL-204ENST00000606752 SH3RF1Q7Z6J0 888 aa24.4■■□□□ 1.5
USP6NL-204ENST00000606752 FCHSD1Q86WN1 690 aa24.4■■□□□ 1.5
USP6NL-204ENST00000606752 CPXCR1Q8N123 301 aa24.4■■□□□ 1.5
USP6NL-204ENST00000606752 RAVER2Q9HCJ3 691 aaKnown RBP24.4■■□□□ 1.5
USP6NL-204ENST00000606752 PCDHA5Q9Y5H7 936 aa24.4■■□□□ 1.5
USP6NL-204ENST00000606752 SMCHD1A6NHR9 2005 aa24.4■■□□□ 1.5
USP6NL-204ENST00000606752 PHIPQ8WWQ0 1821 aa24.39■■□□□ 1.5
USP6NL-204ENST00000606752 COG2Q14746 738 aa24.39■■□□□ 1.49
USP6NL-204ENST00000606752 TMEM266Q2M3C6 531 aa24.39■■□□□ 1.49
USP6NL-204ENST00000606752 CATSPERGQ6ZRH7 1159 aa24.39■■□□□ 1.49
USP6NL-204ENST00000606752 CBX8Q9HC52 389 aa24.39■■□□□ 1.49
USP6NL-204ENST00000606752 PP2D1A8MPX8 630 aa24.38■■□□□ 1.49
USP6NL-204ENST00000606752 CYP3A4P08684 503 aa24.38■■□□□ 1.49
USP6NL-204ENST00000606752 DSG3P32926 999 aa24.38■■□□□ 1.49
USP6NL-204ENST00000606752 CIITAP33076 1130 aa24.38■■□□□ 1.49
USP6NL-204ENST00000606752 NLRP12P59046 1061 aa24.38■■□□□ 1.49
USP6NL-204ENST00000606752 TTLL12Q14166 644 aaPredicted RBP24.38■■□□□ 1.49
USP6NL-204ENST00000606752 PDIA5Q14554 519 aa24.38■■□□□ 1.49
USP6NL-204ENST00000606752 KARSQ15046 597 aaKnown RBP24.38■■□□□ 1.49
USP6NL-204ENST00000606752 MCF2L2Q86YR7 1114 aa24.38■■□□□ 1.49
USP6NL-204ENST00000606752 HAS1Q92839 578 aa24.38■■□□□ 1.49
USP6NL-204ENST00000606752 ATG4CQ96DT6 458 aa24.38■■□□□ 1.49
USP6NL-204ENST00000606752 PAGE5Q96GU1 130 aa24.38■■□□□ 1.49
USP6NL-204ENST00000606752 RAB34Q9BZG1 259 aa24.38■■□□□ 1.49
USP6NL-204ENST00000606752 CCDC39Q9UFE4 941 aa24.38■■□□□ 1.49
USP6NL-204ENST00000606752 MYH7BA7E2Y1 1941 aa24.38■■□□□ 1.49
USP6NL-204ENST00000606752 A0A087WWV3 80 aa24.38■■□□□ 1.49
USP6NL-204ENST00000606752 PPATQ06203 517 aa24.38■■□□□ 1.49
USP6NL-204ENST00000606752 C11orf57Q6ZUT1 292 aaPredicted RBP24.38■■□□□ 1.49
USP6NL-204ENST00000606752 CLEC4DQ8WXI8 215 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms