RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 MAP3K20Q9NYL2 800 aaKnown RBP22.31■■□□□ 1.16
SRSF4-206ENST00000605204 SYN1P17600 705 aa22.3■■□□□ 1.16
SRSF4-206ENST00000605204 RPS6P62753 249 aaKnown RBP22.3■■□□□ 1.16
SRSF4-206ENST00000605204 VAT1LQ9HCJ6 419 aa22.3■■□□□ 1.16
SRSF4-206ENST00000605204 VTA1Q9NP79 307 aa22.3■■□□□ 1.16
SRSF4-206ENST00000605204 DUSP11O75319 330 aaKnown RBP22.29■■□□□ 1.16
SRSF4-206ENST00000605204 TAL1P17542 331 aaPredicted RBP22.29■■□□□ 1.16
SRSF4-206ENST00000605204 ALDH5A1P51649 535 aaPredicted RBP22.29■■□□□ 1.16
SRSF4-206ENST00000605204 RCAN1P53805 252 aa22.29■■□□□ 1.16
SRSF4-206ENST00000605204 SLC30A10Q6XR72 485 aa22.29■■□□□ 1.16
SRSF4-206ENST00000605204 RASEFQ8IZ41 740 aa22.29■■□□□ 1.16
SRSF4-206ENST00000605204 SPC25Q9HBM1 224 aa22.29■■□□□ 1.16
SRSF4-206ENST00000605204 ZNFX1Q9P2E3 1918 aaKnown RBP22.29■■□□□ 1.16
SRSF4-206ENST00000605204 PNMA6FA0A0J9YX94 578 aa22.28■■□□□ 1.16
SRSF4-206ENST00000605204 CALML3P27482 149 aa22.28■■□□□ 1.16
SRSF4-206ENST00000605204 PSMA5P28066 241 aa22.28■■□□□ 1.16
SRSF4-206ENST00000605204 EXOSC10Q01780 885 aaKnown RBP22.28■■□□□ 1.16
SRSF4-206ENST00000605204 GHRHRQ02643 423 aa22.28■■□□□ 1.16
SRSF4-206ENST00000605204 KATNBL1Q9H079 304 aa22.28■■□□□ 1.16
SRSF4-206ENST00000605204 ASTN1O14525 1302 aa22.28■■□□□ 1.16
SRSF4-206ENST00000605204 MAGEA10P43363 369 aaPredicted RBP22.27■■□□□ 1.16
SRSF4-206ENST00000605204 HOMER1Q86YM7 354 aa22.27■■□□□ 1.16
SRSF4-206ENST00000605204 GPHNQ9NQX3 736 aaPredicted RBP22.27■■□□□ 1.16
SRSF4-206ENST00000605204 PCDHA1Q9Y5I3 950 aa22.27■■□□□ 1.16
SRSF4-206ENST00000605204 LTBP2Q14767 1821 aa22.27■■□□□ 1.15
SRSF4-206ENST00000605204 LRRC41Q15345 812 aa22.26■■□□□ 1.15
SRSF4-206ENST00000605204 ADCK5Q3MIX3 580 aa22.26■■□□□ 1.15
SRSF4-206ENST00000605204 CCDC144BQ3MJ40 725 aa22.26■■□□□ 1.15
SRSF4-206ENST00000605204 RRP36Q96EU6 259 aaKnown RBP22.26■■□□□ 1.15
SRSF4-206ENST00000605204 RBM28Q9NW13 759 aaKnown RBP22.26■■□□□ 1.15
SRSF4-206ENST00000605204 SEC63Q9UGP8 760 aaKnown RBP22.26■■□□□ 1.15
SRSF4-206ENST00000605204 CYTH3O43739 400 aa22.25■■□□□ 1.15
SRSF4-206ENST00000605204 EDNRBP24530 442 aa22.25■■□□□ 1.15
SRSF4-206ENST00000605204 CST5P28325 142 aaPredicted RBP22.25■■□□□ 1.15
SRSF4-206ENST00000605204 FGD1P98174 961 aa22.25■■□□□ 1.15
SRSF4-206ENST00000605204 ANO1Q5XXA6 986 aa22.25■■□□□ 1.15
SRSF4-206ENST00000605204 APOA5Q6Q788 366 aa22.25■■□□□ 1.15
SRSF4-206ENST00000605204 BLOC1S2Q6QNY1 142 aa22.25■■□□□ 1.15
SRSF4-206ENST00000605204 FBXL16Q8N461 479 aa22.25■■□□□ 1.15
SRSF4-206ENST00000605204 JAKMIP1Q96N16 626 aaKnown RBP22.25■■□□□ 1.15
SRSF4-206ENST00000605204 PIGSQ96S52 555 aa22.25■■□□□ 1.15
SRSF4-206ENST00000605204 TSEN34Q9BSV6 310 aaKnown RBP22.25■■□□□ 1.15
SRSF4-206ENST00000605204 SNX14Q9Y5W7 946 aa22.25■■□□□ 1.15
SRSF4-206ENST00000605204 A0A0C4DFX4 3053 aa22.25■■□□□ 1.15
SRSF4-206ENST00000605204 ADAMTS4O75173 837 aa22.25■■□□□ 1.15
SRSF4-206ENST00000605204 NKX3-2P78367 333 aa22.25■■□□□ 1.15
SRSF4-206ENST00000605204 PDE4DQ08499 809 aa22.25■■□□□ 1.15
SRSF4-206ENST00000605204 PPP2R5BQ15173 497 aa22.25■■□□□ 1.15
SRSF4-206ENST00000605204 GJC2Q5T442 439 aaPredicted RBP22.25■■□□□ 1.15
SRSF4-206ENST00000605204 IQSEC1Q6DN90 963 aa22.25■■□□□ 1.15
SRSF4-206ENST00000605204 FANCBQ8NB91 859 aa22.25■■□□□ 1.15
SRSF4-206ENST00000605204 NSUN6Q8TEA1 469 aaKnown RBP22.25■■□□□ 1.15
SRSF4-206ENST00000605204 IWS1Q96ST2 819 aa22.25■■□□□ 1.15
SRSF4-206ENST00000605204 MYL10Q9BUA6 226 aa22.25■■□□□ 1.15
SRSF4-206ENST00000605204 LRRC2Q9BYS8 371 aa22.25■■□□□ 1.15
SRSF4-206ENST00000605204 Q9Y3F1 56 aa22.25■■□□□ 1.15
SRSF4-206ENST00000605204 SYNRGQ9UMZ2 1314 aa22.24■■□□□ 1.15
SRSF4-206ENST00000605204 MOXD2PA6NHM9 499 aa22.24■■□□□ 1.15
SRSF4-206ENST00000605204 ZBTB43O43298 467 aa22.24■■□□□ 1.15
SRSF4-206ENST00000605204 BMP8BP34820 402 aa22.24■■□□□ 1.15
SRSF4-206ENST00000605204 HSD17B4P51659 736 aa22.24■■□□□ 1.15
SRSF4-206ENST00000605204 TNFAIP2Q03169 654 aa22.24■■□□□ 1.15
SRSF4-206ENST00000605204 SLC35G1Q2M3R5 365 aa22.24■■□□□ 1.15
SRSF4-206ENST00000605204 MICU3Q86XE3 530 aa22.24■■□□□ 1.15
SRSF4-206ENST00000605204 SYTL5Q8TDW5 730 aaPredicted RBP22.24■■□□□ 1.15
SRSF4-206ENST00000605204 SENP6Q9GZR1 1112 aaPredicted RBP22.24■■□□□ 1.15
SRSF4-206ENST00000605204 UPF3AQ9H1J1 476 aaKnown RBP22.24■■□□□ 1.15
SRSF4-206ENST00000605204 PHF24Q9UPV7 400 aa22.24■■□□□ 1.15
SRSF4-206ENST00000605204 PPP1R11O60927 126 aaPredicted RBP22.23■■□□□ 1.15
SRSF4-206ENST00000605204 MYCNP04198 464 aaPredicted RBP22.23■■□□□ 1.15
SRSF4-206ENST00000605204 GJA9P57773 515 aa22.23■■□□□ 1.15
SRSF4-206ENST00000605204 COL9A3Q14050 684 aaPredicted RBP22.23■■□□□ 1.15
SRSF4-206ENST00000605204 LRRC26Q2I0M4 334 aa22.23■■□□□ 1.15
SRSF4-206ENST00000605204 TMTC3Q6ZXV5 915 aa22.23■■□□□ 1.15
SRSF4-206ENST00000605204 PCSK9Q8NBP7 692 aaKnown RBP22.23■■□□□ 1.15
SRSF4-206ENST00000605204 PGK1P00558 417 aa22.22■■□□□ 1.15
SRSF4-206ENST00000605204 CFBP00751 764 aa22.22■■□□□ 1.15
SRSF4-206ENST00000605204 C1orf53Q5VUE5 145 aa22.22■■□□□ 1.15
SRSF4-206ENST00000605204 TEX2Q8IWB9 1127 aa22.22■■□□□ 1.15
SRSF4-206ENST00000605204 FBXO16Q8IX29 292 aaPredicted RBP22.22■■□□□ 1.15
SRSF4-206ENST00000605204 KLHDC9Q8NEP7 349 aa22.22■■□□□ 1.15
SRSF4-206ENST00000605204 PURBQ96QR8 312 aaKnown RBP22.22■■□□□ 1.15
SRSF4-206ENST00000605204 USP26Q9BXU7 913 aa22.22■■□□□ 1.15
SRSF4-206ENST00000605204 UNC80Q8N2C7 3258 aa22.22■■□□□ 1.15
SRSF4-206ENST00000605204 CCDC196A0A1B0GTZ2 297 aa22.21■■□□□ 1.15
SRSF4-206ENST00000605204 RPS6KB1P23443 525 aa22.21■■□□□ 1.15
SRSF4-206ENST00000605204 RTN1Q16799 776 aa22.21■■□□□ 1.15
SRSF4-206ENST00000605204 TAPT1Q6NXT6 567 aa22.21■■□□□ 1.15
SRSF4-206ENST00000605204 Q7L0L9 218 aa22.21■■□□□ 1.15
SRSF4-206ENST00000605204 SCFD2Q8WU76 684 aa22.21■■□□□ 1.15
SRSF4-206ENST00000605204 RMDN3Q96TC7 470 aa22.21■■□□□ 1.15
SRSF4-206ENST00000605204 TM6SF1Q9BZW5 370 aa22.21■■□□□ 1.15
SRSF4-206ENST00000605204 GNEQ9Y223 722 aaKnown RBP22.21■■□□□ 1.15
SRSF4-206ENST00000605204 KLF18A0A0U1RQI7 1052 aa22.2■■□□□ 1.14
SRSF4-206ENST00000605204 RBM47A0AV96 593 aaKnown RBP22.2■■□□□ 1.14
SRSF4-206ENST00000605204 GCOM1H8Y6P7 765 aaPredicted RBP22.2■■□□□ 1.14
SRSF4-206ENST00000605204 OPLAHO14841 1288 aa22.2■■□□□ 1.14
SRSF4-206ENST00000605204 NKRFO15226 690 aaKnown RBP eCLIP22.2■■□□□ 1.14
SRSF4-206ENST00000605204 PLEKHA8P1O95397 391 aa22.2■■□□□ 1.14
SRSF4-206ENST00000605204 C6orf222P0C671 652 aaPredicted RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms