RNA–Protein interactions for RNA: ENST00000602660.1

SFXN2-208, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 667 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-208ENST00000602660 MTA3Q9BTC8 594 aa18.6■□□□□ 0.57
SFXN2-208ENST00000602660 RIOX1Q9H6W3 641 aa18.6■□□□□ 0.57
SFXN2-208ENST00000602660 COL20A1Q9P218 1284 aa18.6■□□□□ 0.57
SFXN2-208ENST00000602660 GNEQ9Y223 722 aaKnown RBP18.6■□□□□ 0.57
SFXN2-208ENST00000602660 KAT6AQ92794 2004 aa18.59■□□□□ 0.57
SFXN2-208ENST00000602660 LOC102724159A0A0B4J2E5 919 aa18.59■□□□□ 0.57
SFXN2-208ENST00000602660 SH2B2O14492 632 aaPredicted RBP18.59■□□□□ 0.57
SFXN2-208ENST00000602660 EDNRBP24530 442 aa18.59■□□□□ 0.57
SFXN2-208ENST00000602660 GJA9P57773 515 aa18.59■□□□□ 0.57
SFXN2-208ENST00000602660 NKX3-2P78367 333 aa18.59■□□□□ 0.57
SFXN2-208ENST00000602660 SART3Q15020 963 aaKnown RBP18.59■□□□□ 0.57
SFXN2-208ENST00000602660 PWP2Q15269 919 aaKnown RBP18.59■□□□□ 0.57
SFXN2-208ENST00000602660 EEPD1Q7L9B9 569 aa18.59■□□□□ 0.57
SFXN2-208ENST00000602660 FBXO11Q86XK2 927 aa18.59■□□□□ 0.57
SFXN2-208ENST00000602660 RASEFQ8IZ41 740 aa18.59■□□□□ 0.57
SFXN2-208ENST00000602660 ZNF654Q8IZM8 581 aa18.59■□□□□ 0.57
SFXN2-208ENST00000602660 TSEN34Q9BSV6 310 aaKnown RBP18.59■□□□□ 0.57
SFXN2-208ENST00000602660 ADD3Q9UEY8 706 aaKnown RBP18.59■□□□□ 0.57
SFXN2-208ENST00000602660 MYO9BQ13459 2157 aa18.59■□□□□ 0.57
SFXN2-208ENST00000602660 A0A1W2PQ45 241 aaPredicted RBP18.58■□□□□ 0.56
SFXN2-208ENST00000602660 A0A1W2PQY0 241 aa18.58■□□□□ 0.56
SFXN2-208ENST00000602660 DHX16O60231 1041 aaKnown RBP18.58■□□□□ 0.56
SFXN2-208ENST00000602660 SMPD1P17405 629 aa18.58■□□□□ 0.56
SFXN2-208ENST00000602660 MCM5P33992 734 aa18.58■□□□□ 0.56
SFXN2-208ENST00000602660 C1orf53Q5VUE5 145 aa18.58■□□□□ 0.56
SFXN2-208ENST00000602660 MYL10Q9BUA6 226 aa18.58■□□□□ 0.56
SFXN2-208ENST00000602660 VTA1Q9NP79 307 aa18.58■□□□□ 0.56
SFXN2-208ENST00000602660 WDR81Q562E7 1941 aa18.58■□□□□ 0.56
SFXN2-208ENST00000602660 ZBTB5O15062 677 aa18.57■□□□□ 0.56
SFXN2-208ENST00000602660 C6orf222P0C671 652 aaPredicted RBP18.57■□□□□ 0.56
SFXN2-208ENST00000602660 ACLYP53396 1101 aa18.57■□□□□ 0.56
SFXN2-208ENST00000602660 GHRHRQ02643 423 aa18.57■□□□□ 0.56
SFXN2-208ENST00000602660 TNFAIP2Q03169 654 aa18.57■□□□□ 0.56
SFXN2-208ENST00000602660 KCNA10Q16322 511 aa18.57■□□□□ 0.56
SFXN2-208ENST00000602660 TSGA10IPQ3SY00 556 aa18.57■□□□□ 0.56
SFXN2-208ENST00000602660 TRIM60Q495X7 471 aa18.57■□□□□ 0.56
SFXN2-208ENST00000602660 CATIPQ7Z7H3 387 aa18.57■□□□□ 0.56
SFXN2-208ENST00000602660 DNERQ8NFT8 737 aa18.57■□□□□ 0.56
SFXN2-208ENST00000602660 SYTL5Q8TDW5 730 aaPredicted RBP18.57■□□□□ 0.56
SFXN2-208ENST00000602660 TMEM87BQ96K49 555 aa18.57■□□□□ 0.56
SFXN2-208ENST00000602660 AMNQ9BXJ7 453 aa18.57■□□□□ 0.56
SFXN2-208ENST00000602660 LRRC2Q9BYS8 371 aa18.57■□□□□ 0.56
SFXN2-208ENST00000602660 MAF1Q9H063 256 aa18.57■□□□□ 0.56
SFXN2-208ENST00000602660 SCN5AQ14524 2016 aa18.56■□□□□ 0.56
SFXN2-208ENST00000602660 RBM47A0AV96 593 aaKnown RBP18.56■□□□□ 0.56
SFXN2-208ENST00000602660 DDAH1O94760 285 aa18.56■□□□□ 0.56
SFXN2-208ENST00000602660 LIFRP42702 1097 aa18.56■□□□□ 0.56
SFXN2-208ENST00000602660 MAGEA10P43363 369 aaPredicted RBP18.56■□□□□ 0.56
SFXN2-208ENST00000602660 FXR1P51114 621 aaKnown RBP eCLIP18.56■□□□□ 0.56
SFXN2-208ENST00000602660 ADCK5Q3MIX3 580 aa18.56■□□□□ 0.56
SFXN2-208ENST00000602660 CASC1Q6TDU7 716 aa18.56■□□□□ 0.56
SFXN2-208ENST00000602660 TAAR1Q96RJ0 339 aa18.56■□□□□ 0.56
SFXN2-208ENST00000602660 PIGSQ96S52 555 aa18.56■□□□□ 0.56
SFXN2-208ENST00000602660 MAP3K14Q99558 947 aa18.56■□□□□ 0.56
SFXN2-208ENST00000602660 ATP11BQ9Y2G3 1177 aa18.56■□□□□ 0.56
SFXN2-208ENST00000602660 MRPL11Q9Y3B7 192 aaKnown RBP18.56■□□□□ 0.56
SFXN2-208ENST00000602660 LAMA2P24043 3122 aaKnown RBP18.56■□□□□ 0.56
SFXN2-208ENST00000602660 MOXD2PA6NHM9 499 aa18.55■□□□□ 0.56
SFXN2-208ENST00000602660 SLC34A2O95436 690 aa18.55■□□□□ 0.56
SFXN2-208ENST00000602660 ASGR1P07306 291 aa18.55■□□□□ 0.56
SFXN2-208ENST00000602660 HSD17B4P51659 736 aa18.55■□□□□ 0.56
SFXN2-208ENST00000602660 EXOSC10Q01780 885 aaKnown RBP18.55■□□□□ 0.56
SFXN2-208ENST00000602660 IQSEC1Q6DN90 963 aa18.55■□□□□ 0.56
SFXN2-208ENST00000602660 TLK2Q86UE8 772 aa18.55■□□□□ 0.56
SFXN2-208ENST00000602660 NUP133Q8WUM0 1156 aa18.55■□□□□ 0.56
SFXN2-208ENST00000602660 KCNB2Q92953 911 aa18.55■□□□□ 0.56
SFXN2-208ENST00000602660 GBF1Q92538 1859 aa18.54■□□□□ 0.56
SFXN2-208ENST00000602660 BMP8BP34820 402 aa18.54■□□□□ 0.56
SFXN2-208ENST00000602660 BEX3Q00994 111 aa18.54■□□□□ 0.56
SFXN2-208ENST00000602660 GNASQ5JWF2 1037 aa18.54■□□□□ 0.56
SFXN2-208ENST00000602660 RNF20Q5VTR2 975 aa18.54■□□□□ 0.56
SFXN2-208ENST00000602660 SGMS1Q86VZ5 419 aa18.54■□□□□ 0.56
SFXN2-208ENST00000602660 HOMER1Q86YM7 354 aa18.54■□□□□ 0.56
SFXN2-208ENST00000602660 TET1Q8NFU7 2136 aa18.54■□□□□ 0.56
SFXN2-208ENST00000602660 SPZ1Q9BXG8 430 aa18.54■□□□□ 0.56
SFXN2-208ENST00000602660 PDLIM7Q9NR12 457 aa18.54■□□□□ 0.56
SFXN2-208ENST00000602660 PPP4R2Q9NY27 417 aa18.54■□□□□ 0.56
SFXN2-208ENST00000602660 PCDHA1Q9Y5I3 950 aa18.54■□□□□ 0.56
SFXN2-208ENST00000602660 PLEKHA8P1O95397 391 aa18.53■□□□□ 0.56
SFXN2-208ENST00000602660 RXRAP19793 462 aa18.53■□□□□ 0.56
SFXN2-208ENST00000602660 TLE2Q04725 743 aa18.53■□□□□ 0.56
SFXN2-208ENST00000602660 DUSP28Q4G0W2 176 aa18.53■□□□□ 0.56
SFXN2-208ENST00000602660 ERICH6BQ5W0A0 696 aa18.53■□□□□ 0.56
SFXN2-208ENST00000602660 SH3RF1Q7Z6J0 888 aa18.53■□□□□ 0.56
SFXN2-208ENST00000602660 MCF2L2Q86YR7 1114 aa18.53■□□□□ 0.56
SFXN2-208ENST00000602660 TMTC2Q8N394 836 aa18.53■□□□□ 0.56
SFXN2-208ENST00000602660 PCSK9Q8NBP7 692 aaKnown RBP18.53■□□□□ 0.56
SFXN2-208ENST00000602660 TCEANC2Q96MN5 208 aa18.53■□□□□ 0.56
SFXN2-208ENST00000602660 NEK1Q96PY6 1258 aa18.53■□□□□ 0.56
SFXN2-208ENST00000602660 STARD7Q9NQZ5 370 aa18.53■□□□□ 0.56
SFXN2-208ENST00000602660 Q9Y3F1 56 aa18.53■□□□□ 0.56
SFXN2-208ENST00000602660 PNMA6FA0A0J9YX94 578 aa18.52■□□□□ 0.56
SFXN2-208ENST00000602660 PDE4DQ08499 809 aa18.52■□□□□ 0.56
SFXN2-208ENST00000602660 FSCN1Q16658 493 aaKnown RBP18.52■□□□□ 0.56
SFXN2-208ENST00000602660 NOL8Q76FK4 1167 aaKnown RBP18.52■□□□□ 0.56
SFXN2-208ENST00000602660 RAB11FIP4Q86YS3 637 aa18.52■□□□□ 0.56
SFXN2-208ENST00000602660 WDR11Q9BZH6 1224 aa18.52■□□□□ 0.56
SFXN2-208ENST00000602660 SPC25Q9HBM1 224 aa18.52■□□□□ 0.56
SFXN2-208ENST00000602660 TANC1Q9C0D5 1861 aa18.52■□□□□ 0.55
SFXN2-208ENST00000602660 ELP1O95163 1332 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms