RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 TAF6LQ9Y6J9 622 aa26.48■■□□□ 1.83
SSBP4-209ENST00000601357 PTGS1P23219 599 aa26.47■■□□□ 1.83
SSBP4-209ENST00000601357 CALML3P27482 149 aa26.47■■□□□ 1.83
SSBP4-209ENST00000601357 USH1GQ495M9 461 aa26.47■■□□□ 1.83
SSBP4-209ENST00000601357 TMEM63BQ5T3F8 832 aa26.47■■□□□ 1.83
SSBP4-209ENST00000601357 MAP4K1Q92918 833 aa26.47■■□□□ 1.83
SSBP4-209ENST00000601357 MYH6P13533 1939 aa26.47■■□□□ 1.83
SSBP4-209ENST00000601357 EDNRBP24530 442 aa26.46■■□□□ 1.83
SSBP4-209ENST00000601357 BEX3Q00994 111 aa26.46■■□□□ 1.83
SSBP4-209ENST00000601357 TRDNQ13061 729 aa26.46■■□□□ 1.83
SSBP4-209ENST00000601357 NOL8Q76FK4 1167 aaKnown RBP26.46■■□□□ 1.83
SSBP4-209ENST00000601357 DNERQ8NFT8 737 aa26.46■■□□□ 1.83
SSBP4-209ENST00000601357 JMJD4Q9H9V9 463 aa26.46■■□□□ 1.83
SSBP4-209ENST00000601357 ABCB11O95342 1321 aa26.45■■□□□ 1.83
SSBP4-209ENST00000601357 RBM47A0AV96 593 aaKnown RBP26.45■■□□□ 1.82
SSBP4-209ENST00000601357 E7EWF7 191 aa26.45■■□□□ 1.82
SSBP4-209ENST00000601357 QRICH1Q2TAL8 776 aa26.45■■□□□ 1.82
SSBP4-209ENST00000601357 STAG2Q8N3U4 1231 aa26.45■■□□□ 1.82
SSBP4-209ENST00000601357 MROH7Q68CQ1 1323 aa26.44■■□□□ 1.82
SSBP4-209ENST00000601357 A0A0U1RQG5 324 aaPredicted RBP26.44■■□□□ 1.82
SSBP4-209ENST00000601357 DCDC2CA8MYV0 355 aa26.44■■□□□ 1.82
SSBP4-209ENST00000601357 FSCN1Q16658 493 aaKnown RBP26.44■■□□□ 1.82
SSBP4-209ENST00000601357 DUSP28Q4G0W2 176 aa26.44■■□□□ 1.82
SSBP4-209ENST00000601357 KIAA1211Q6ZU35 1233 aa26.44■■□□□ 1.82
SSBP4-209ENST00000601357 STOX1Q6ZVD7 989 aa26.44■■□□□ 1.82
SSBP4-209ENST00000601357 AP5M1Q9H0R1 490 aa26.44■■□□□ 1.82
SSBP4-209ENST00000601357 ARVCFO00192 962 aa26.43■■□□□ 1.82
SSBP4-209ENST00000601357 DYNC1LI2O43237 492 aaPredicted RBP26.43■■□□□ 1.82
SSBP4-209ENST00000601357 TMEM39AQ9NV64 488 aa26.43■■□□□ 1.82
SSBP4-209ENST00000601357 MAD2L2Q9UI95 211 aa26.43■■□□□ 1.82
SSBP4-209ENST00000601357 TBX21Q9UL17 535 aa26.43■■□□□ 1.82
SSBP4-209ENST00000601357 PALM3A6NDB9 673 aaPredicted RBP26.42■■□□□ 1.82
SSBP4-209ENST00000601357 KLRF2D3W0D1 207 aa26.42■■□□□ 1.82
SSBP4-209ENST00000601357 SHHQ15465 462 aa26.42■■□□□ 1.82
SSBP4-209ENST00000601357 CXCL17Q6UXB2 119 aa26.42■■□□□ 1.82
SSBP4-209ENST00000601357 SLC43A3Q8NBI5 491 aa26.42■■□□□ 1.82
SSBP4-209ENST00000601357 NCOA7Q8NI08 942 aa26.42■■□□□ 1.82
SSBP4-209ENST00000601357 MTMR8Q96EF0 704 aa26.42■■□□□ 1.82
SSBP4-209ENST00000601357 WDR11Q9BZH6 1224 aa26.42■■□□□ 1.82
SSBP4-209ENST00000601357 COL6A3P12111 3177 aa26.42■■□□□ 1.82
SSBP4-209ENST00000601357 CABYRO75952 493 aa26.41■■□□□ 1.82
SSBP4-209ENST00000601357 RAG1P15918 1043 aa26.41■■□□□ 1.82
SSBP4-209ENST00000601357 PDE4DQ08499 809 aa26.41■■□□□ 1.82
SSBP4-209ENST00000601357 C9orf50Q5SZB4 431 aa26.41■■□□□ 1.82
SSBP4-209ENST00000601357 RALYLQ86SE5 291 aaKnown RBP26.41■■□□□ 1.82
SSBP4-209ENST00000601357 FBXO11Q86XK2 927 aa26.41■■□□□ 1.82
SSBP4-209ENST00000601357 FAM126BQ8IXS8 530 aa26.41■■□□□ 1.82
SSBP4-209ENST00000601357 TBC1D5Q92609 795 aa26.41■■□□□ 1.82
SSBP4-209ENST00000601357 MPHOSPH6Q99547 160 aaKnown RBP26.41■■□□□ 1.82
SSBP4-209ENST00000601357 SENP2Q9HC62 589 aa26.41■■□□□ 1.82
SSBP4-209ENST00000601357 RBM8AQ9Y5S9 174 aaKnown RBP26.41■■□□□ 1.82
SSBP4-209ENST00000601357 IFIT3O14879 490 aaKnown RBP26.4■■□□□ 1.82
SSBP4-209ENST00000601357 DHX16O60231 1041 aaKnown RBP26.4■■□□□ 1.82
SSBP4-209ENST00000601357 VTI1AQ96AJ9 217 aa26.4■■□□□ 1.82
SSBP4-209ENST00000601357 VAT1LQ9HCJ6 419 aa26.4■■□□□ 1.82
SSBP4-209ENST00000601357 COL20A1Q9P218 1284 aa26.4■■□□□ 1.82
SSBP4-209ENST00000601357 ANTXR2P58335 489 aa26.39■■□□□ 1.82
SSBP4-209ENST00000601357 GRM4Q14833 912 aa26.39■■□□□ 1.82
SSBP4-209ENST00000601357 SLC35G1Q2M3R5 365 aa26.39■■□□□ 1.82
SSBP4-209ENST00000601357 CENPQQ7L2Z9 268 aaPredicted RBP26.39■■□□□ 1.82
SSBP4-209ENST00000601357 MCF2L2Q86YR7 1114 aa26.39■■□□□ 1.82
SSBP4-209ENST00000601357 MB21D2Q8IYB1 491 aaPredicted RBP26.39■■□□□ 1.82
SSBP4-209ENST00000601357 SYTL5Q8TDW5 730 aaPredicted RBP26.39■■□□□ 1.82
SSBP4-209ENST00000601357 LSG1Q9H089 658 aaKnown RBP26.39■■□□□ 1.82
SSBP4-209ENST00000601357 MRPL11Q9Y3B7 192 aaKnown RBP26.39■■□□□ 1.82
SSBP4-209ENST00000601357 GRIN2DO15399 1336 aa26.39■■□□□ 1.81
SSBP4-209ENST00000601357 ERICH2A1L162 156 aa26.38■■□□□ 1.81
SSBP4-209ENST00000601357 OPLAHO14841 1288 aa26.38■■□□□ 1.81
SSBP4-209ENST00000601357 ZEB2O60315 1214 aa26.38■■□□□ 1.81
SSBP4-209ENST00000601357 PPP1R11O60927 126 aaPredicted RBP26.38■■□□□ 1.81
SSBP4-209ENST00000601357 TIMP1P01033 207 aa26.38■■□□□ 1.81
SSBP4-209ENST00000601357 CD4P01730 458 aa26.38■■□□□ 1.81
SSBP4-209ENST00000601357 EPHB4P54760 987 aa26.38■■□□□ 1.81
SSBP4-209ENST00000601357 GHRHRQ02643 423 aa26.38■■□□□ 1.81
SSBP4-209ENST00000601357 TROAPQ12815 778 aa26.38■■□□□ 1.81
SSBP4-209ENST00000601357 CHST3Q7LGC8 479 aa26.38■■□□□ 1.81
SSBP4-209ENST00000601357 ESYT1Q9BSJ8 1104 aa26.38■■□□□ 1.81
SSBP4-209ENST00000601357 AMNQ9BXJ7 453 aa26.38■■□□□ 1.81
SSBP4-209ENST00000601357 B4DLN1 442 aa26.37■■□□□ 1.81
SSBP4-209ENST00000601357 MRPL12P52815 198 aaKnown RBP26.37■■□□□ 1.81
SSBP4-209ENST00000601357 WTAPQ15007 396 aa26.37■■□□□ 1.81
SSBP4-209ENST00000601357 SART3Q15020 963 aaKnown RBP26.37■■□□□ 1.81
SSBP4-209ENST00000601357 DEFB123Q8N688 67 aa26.37■■□□□ 1.81
SSBP4-209ENST00000601357 IGDCC4Q8TDY8 1250 aa26.37■■□□□ 1.81
SSBP4-209ENST00000601357 SCFD2Q8WU76 684 aa26.37■■□□□ 1.81
SSBP4-209ENST00000601357 TAAR1Q96RJ0 339 aa26.37■■□□□ 1.81
SSBP4-209ENST00000601357 ZBTB5O15062 677 aa26.36■■□□□ 1.81
SSBP4-209ENST00000601357 NKRFO15226 690 aaKnown RBP eCLIP26.36■■□□□ 1.812e-6■□□□□ 10.9
SSBP4-209ENST00000601357 FPGSQ05932 587 aa26.36■■□□□ 1.81
SSBP4-209ENST00000601357 ITGA7Q13683 1181 aa26.36■■□□□ 1.81
SSBP4-209ENST00000601357 BMP2KLQ5H9B9 411 aa26.36■■□□□ 1.81
SSBP4-209ENST00000601357 Q7L0L9 218 aa26.36■■□□□ 1.81
SSBP4-209ENST00000601357 SKAP1Q86WV1 359 aa26.36■■□□□ 1.81
SSBP4-209ENST00000601357 NSUN6Q8TEA1 469 aaKnown RBP26.36■■□□□ 1.81
SSBP4-209ENST00000601357 SEZ6LQ9BYH1 1024 aa26.36■■□□□ 1.81
SSBP4-209ENST00000601357 RIOX1Q9H6W3 641 aa26.36■■□□□ 1.81
SSBP4-209ENST00000601357 KIAA1217Q5T5P2 1943 aa26.35■■□□□ 1.81
SSBP4-209ENST00000601357 HSD17B4P51659 736 aa26.35■■□□□ 1.81
SSBP4-209ENST00000601357 PPP2R5BQ15173 497 aa26.35■■□□□ 1.81
SSBP4-209ENST00000601357 TMEM67Q5HYA8 995 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms