RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 DEFB128Q7Z7B8 93 aa19.88■□□□□ 0.77
USE1-208ENST00000600970 CCPG1Q9ULG6 757 aa19.88■□□□□ 0.77
USE1-208ENST00000600970 STX8Q9UNK0 236 aa19.88■□□□□ 0.77
USE1-208ENST00000600970 MTCH2Q9Y6C9 303 aa19.88■□□□□ 0.77
USE1-208ENST00000600970 TNKSO95271 1327 aa19.87■□□□□ 0.77
USE1-208ENST00000600970 ERC2O15083 957 aa19.87■□□□□ 0.77
USE1-208ENST00000600970 CA3P07451 260 aa19.87■□□□□ 0.77
USE1-208ENST00000600970 POU3F3P20264 500 aaPredicted RBP19.87■□□□□ 0.77
USE1-208ENST00000600970 KCNQ1P51787 676 aa19.87■□□□□ 0.77
USE1-208ENST00000600970 PURAQ00577 322 aaKnown RBP19.87■□□□□ 0.77
USE1-208ENST00000600970 SKIV2LQ15477 1246 aaKnown RBP19.87■□□□□ 0.77
USE1-208ENST00000600970 AAK1Q2M2I8 961 aa19.87■□□□□ 0.77
USE1-208ENST00000600970 LRRFIP1Q32MZ4 808 aaKnown RBP19.87■□□□□ 0.77
USE1-208ENST00000600970 PPP4R3BQ5MIZ7 849 aa19.87■□□□□ 0.77
USE1-208ENST00000600970 IL17RBQ9NRM6 502 aa19.87■□□□□ 0.77
USE1-208ENST00000600970 POLR3EQ9NVU0 708 aa19.87■□□□□ 0.77
USE1-208ENST00000600970 TANC1Q9C0D5 1861 aa19.86■□□□□ 0.77
USE1-208ENST00000600970 TSPY2A6NKD2 308 aa19.86■□□□□ 0.77
USE1-208ENST00000600970 NMT2O60551 498 aa19.86■□□□□ 0.77
USE1-208ENST00000600970 ICAM1P05362 532 aa19.86■□□□□ 0.77
USE1-208ENST00000600970 ALDH5A1P51649 535 aaPredicted RBP19.86■□□□□ 0.77
USE1-208ENST00000600970 BAATQ14032 418 aaPredicted RBP19.86■□□□□ 0.77
USE1-208ENST00000600970 C20orf194Q5TEA3 1177 aa19.86■□□□□ 0.77
USE1-208ENST00000600970 MIER1Q8N108 512 aa19.86■□□□□ 0.77
USE1-208ENST00000600970 FAM122AQ96E09 287 aa19.86■□□□□ 0.77
USE1-208ENST00000600970 WDR11Q9BZH6 1224 aa19.86■□□□□ 0.77
USE1-208ENST00000600970 DCTPP1Q9H773 170 aa19.86■□□□□ 0.77
USE1-208ENST00000600970 CERS4Q9HA82 394 aa19.86■□□□□ 0.77
USE1-208ENST00000600970 INCENPQ9NQS7 918 aa19.86■□□□□ 0.77
USE1-208ENST00000600970 MTMR7Q9Y216 660 aa19.86■□□□□ 0.77
USE1-208ENST00000600970 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.86■□□□□ 0.77
USE1-208ENST00000600970 EPOPA6NHQ4 379 aa19.85■□□□□ 0.77
USE1-208ENST00000600970 GTPBP6O43824 516 aaPredicted RBP19.85■□□□□ 0.77
USE1-208ENST00000600970 MYL3P08590 195 aa19.85■□□□□ 0.77
USE1-208ENST00000600970 CPT1AP50416 773 aa19.85■□□□□ 0.77
USE1-208ENST00000600970 C1QTNF1Q9BXJ1 281 aa19.85■□□□□ 0.77
USE1-208ENST00000600970 RANBP17Q9H2T7 1088 aaKnown RBP19.85■□□□□ 0.77
USE1-208ENST00000600970 ADD3Q9UEY8 706 aaKnown RBP19.85■□□□□ 0.77
USE1-208ENST00000600970 SCN10AQ9Y5Y9 1956 aa19.84■□□□□ 0.77
USE1-208ENST00000600970 RBM47A0AV96 593 aaKnown RBP19.84■□□□□ 0.77
USE1-208ENST00000600970 ACTN1P12814 892 aa19.84■□□□□ 0.77
USE1-208ENST00000600970 CTDSPL2Q05D32 466 aa19.84■□□□□ 0.77
USE1-208ENST00000600970 ZMYM1Q5SVZ6 1142 aa19.84■□□□□ 0.77
USE1-208ENST00000600970 OR6J1Q8NGC5 347 aa19.84■□□□□ 0.77
USE1-208ENST00000600970 SLC9A7Q96T83 725 aa19.84■□□□□ 0.77
USE1-208ENST00000600970 MTG1Q9BT17 334 aaPredicted RBP19.84■□□□□ 0.77
USE1-208ENST00000600970 PTPRSQ13332 1948 aa19.83■□□□□ 0.77
USE1-208ENST00000600970 LOC102724159A0A0B4J2E5 919 aa19.83■□□□□ 0.77
USE1-208ENST00000600970 NFIBO00712 420 aa19.83■□□□□ 0.77
USE1-208ENST00000600970 ARHGEF15O94989 841 aa19.83■□□□□ 0.77
USE1-208ENST00000600970 RFC2P35250 354 aa19.83■□□□□ 0.77
USE1-208ENST00000600970 SLC16A2P36021 539 aa19.83■□□□□ 0.77
USE1-208ENST00000600970 NOVP48745 357 aa19.83■□□□□ 0.77
USE1-208ENST00000600970 PWP2Q15269 919 aaKnown RBP19.83■□□□□ 0.77
USE1-208ENST00000600970 CCDC96Q2M329 555 aa19.83■□□□□ 0.77
USE1-208ENST00000600970 NBPF20Q3BBV1 942 aa19.83■□□□□ 0.77
USE1-208ENST00000600970 FAM47CQ5HY64 1035 aa19.83■□□□□ 0.77
USE1-208ENST00000600970 KRT40Q6A162 431 aa19.83■□□□□ 0.77
USE1-208ENST00000600970 TTBK2Q6IQ55 1244 aa19.83■□□□□ 0.77
USE1-208ENST00000600970 PHOSPHO2Q8TCD6 241 aa19.83■□□□□ 0.77
USE1-208ENST00000600970 PPP1R13LQ8WUF5 828 aa19.83■□□□□ 0.77
USE1-208ENST00000600970 GPHNQ9NQX3 736 aaPredicted RBP19.83■□□□□ 0.77
USE1-208ENST00000600970 FOXP2O15409 715 aa19.82■□□□□ 0.76
USE1-208ENST00000600970 IQCF3P0C7M6 154 aa19.82■□□□□ 0.76
USE1-208ENST00000600970 TAP1Q03518 808 aa19.82■□□□□ 0.76
USE1-208ENST00000600970 BTNL9Q6UXG8 535 aa19.82■□□□□ 0.76
USE1-208ENST00000600970 PI4K2BQ8TCG2 481 aa19.82■□□□□ 0.76
USE1-208ENST00000600970 DCAF4Q8WV16 495 aa19.82■□□□□ 0.76
USE1-208ENST00000600970 FSD1Q9BTV5 496 aa19.82■□□□□ 0.76
USE1-208ENST00000600970 RCAN3Q9UKA8 241 aa19.82■□□□□ 0.76
USE1-208ENST00000600970 TRANK1O15050 2925 aa19.82■□□□□ 0.76
USE1-208ENST00000600970 TTC41PQ6P2S7 1318 aa19.81■□□□□ 0.76
USE1-208ENST00000600970 PTPDC1A2A3K4 754 aa19.81■□□□□ 0.76
USE1-208ENST00000600970 PITPNM1O00562 1244 aa19.81■□□□□ 0.76
USE1-208ENST00000600970 SYDE2Q5VT97 1194 aa19.81■□□□□ 0.76
USE1-208ENST00000600970 NFRKBQ6P4R8 1299 aa19.81■□□□□ 0.76
USE1-208ENST00000600970 SLC30A10Q6XR72 485 aa19.81■□□□□ 0.76
USE1-208ENST00000600970 ARNTL2Q8WYA1 636 aa19.81■□□□□ 0.76
USE1-208ENST00000600970 COG5Q9UP83 839 aa19.81■□□□□ 0.76
USE1-208ENST00000600970 COL4A4P53420 1690 aaPredicted RBP19.81■□□□□ 0.76
USE1-208ENST00000600970 PRRC2BQ5JSZ5 2229 aaKnown RBP19.8■□□□□ 0.76
USE1-208ENST00000600970 RANBP6O60518 1105 aaKnown RBP19.8■□□□□ 0.76
USE1-208ENST00000600970 HERC6Q8IVU3 1022 aa19.8■□□□□ 0.76
USE1-208ENST00000600970 RETREG2Q8NC44 543 aa19.8■□□□□ 0.76
USE1-208ENST00000600970 CLEC4DQ8WXI8 215 aa19.8■□□□□ 0.76
USE1-208ENST00000600970 FTOQ9C0B1 505 aaKnown RBP eCLIP19.8■□□□□ 0.76
USE1-208ENST00000600970 EPHX3Q9H6B9 360 aa19.8■□□□□ 0.76
USE1-208ENST00000600970 NKRFO15226 690 aaKnown RBP eCLIP19.79■□□□□ 0.76
USE1-208ENST00000600970 TLL1O43897 1013 aa19.79■□□□□ 0.76
USE1-208ENST00000600970 CALML3P27482 149 aa19.79■□□□□ 0.76
USE1-208ENST00000600970 PPP2R5BQ15173 497 aa19.79■□□□□ 0.76
USE1-208ENST00000600970 BRDTQ58F21 947 aaPredicted RBP19.79■□□□□ 0.76
USE1-208ENST00000600970 COPS5Q92905 334 aa19.79■□□□□ 0.76
USE1-208ENST00000600970 ANAPC4Q9UJX5 808 aa19.79■□□□□ 0.76
USE1-208ENST00000600970 FRMPD2Q68DX3 1309 aaPredicted RBP19.78■□□□□ 0.76
USE1-208ENST00000600970 RAD50Q92878 1312 aa19.78■□□□□ 0.76
USE1-208ENST00000600970 TET1Q8NFU7 2136 aa19.78■□□□□ 0.76
USE1-208ENST00000600970 TRIP12Q14669 1992 aaPredicted RBP19.78■□□□□ 0.76
USE1-208ENST00000600970 A6NJR5 290 aa19.78■□□□□ 0.76
USE1-208ENST00000600970 KIF28PB7ZC32 967 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms