RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	CYP39A1	Q9NYL5	469 aa		13.21	□□□□□ -0.29
NUP62-222	ENST00000600935	VPS13A	Q96RL7	3174 aa		13.21	□□□□□ -0.3
NUP62-222	ENST00000600935	DCHS1	Q96JQ0	3298 aa		13.2	□□□□□ -0.3
NUP62-222	ENST00000600935	POTEB3	A0JP26	581 aa		13.2	□□□□□ -0.3
NUP62-222	ENST00000600935	GSG1L2	A8MUP6	293 aa		13.2	□□□□□ -0.3
NUP62-222	ENST00000600935	BAIAP3	O94812	1187 aa		13.2	□□□□□ -0.3
NUP62-222	ENST00000600935	BMP3	P12645	472 aa		13.2	□□□□□ -0.3
NUP62-222	ENST00000600935	KCNA5	P22460	613 aa		13.2	□□□□□ -0.3
NUP62-222	ENST00000600935	WDR5	P61964	334 aa	Known RBP	13.2	□□□□□ -0.3
NUP62-222	ENST00000600935	DEFB103A	P81534	67 aa		13.2	□□□□□ -0.3
NUP62-222	ENST00000600935	TCTN1	Q2MV58	587 aa		13.2	□□□□□ -0.3
NUP62-222	ENST00000600935	POTEB	Q6S5H4	581 aa		13.2	□□□□□ -0.3
NUP62-222	ENST00000600935	KIAA1211	Q6ZU35	1233 aa		13.2	□□□□□ -0.3
NUP62-222	ENST00000600935	ITPRIP	Q8IWB1	547 aa		13.2	□□□□□ -0.3
NUP62-222	ENST00000600935	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.2	□□□□□ -0.3
NUP62-222	ENST00000600935	TRERF1	Q96PN7	1200 aa		13.2	□□□□□ -0.3
NUP62-222	ENST00000600935	CTAGE1	Q96RT6	745 aa		13.2	□□□□□ -0.3
NUP62-222	ENST00000600935	HAUS7	Q99871	368 aa		13.2	□□□□□ -0.3
NUP62-222	ENST00000600935	BOLA2	Q9H3K6	86 aa		13.2	□□□□□ -0.3
NUP62-222	ENST00000600935	POLR3E	Q9NVU0	708 aa		13.2	□□□□□ -0.3
NUP62-222	ENST00000600935	SYNPO2	Q9UMS6	1093 aa		13.2	□□□□□ -0.3
NUP62-222	ENST00000600935	PLIN4	Q96Q06	1357 aa		13.2	□□□□□ -0.3
NUP62-222	ENST00000600935	RBM47	A0AV96	593 aa	Known RBP	13.19	□□□□□ -0.3
NUP62-222	ENST00000600935	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.19	□□□□□ -0.3
NUP62-222	ENST00000600935	GRXCR2	A6NFK2	248 aa		13.19	□□□□□ -0.3
NUP62-222	ENST00000600935	TMEM232	C9JQI7	657 aa		13.19	□□□□□ -0.3
NUP62-222	ENST00000600935	FDX1	P10109	184 aa		13.19	□□□□□ -0.3
NUP62-222	ENST00000600935	ERVK-21	P61565	698 aa		13.19	□□□□□ -0.3
NUP62-222	ENST00000600935	SLFN13	Q68D06	897 aa		13.19	□□□□□ -0.3
NUP62-222	ENST00000600935	CLASRP	Q8N2M8	674 aa	Known RBP	13.19	□□□□□ -0.3
NUP62-222	ENST00000600935	DDRGK1	Q96HY6	314 aa		13.19	□□□□□ -0.3
NUP62-222	ENST00000600935	UIMC1	Q96RL1	719 aa		13.19	□□□□□ -0.3
NUP62-222	ENST00000600935	STRBP	Q96SI9	672 aa	Known RBP	13.19	□□□□□ -0.3
NUP62-222	ENST00000600935	MTG1	Q9BT17	334 aa	Predicted RBP	13.19	□□□□□ -0.3
NUP62-222	ENST00000600935	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
NUP62-222	ENST00000600935	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
NUP62-222	ENST00000600935	MKNK2	Q9HBH9	465 aa		13.19	□□□□□ -0.3
NUP62-222	ENST00000600935	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.19	□□□□□ -0.3
NUP62-222	ENST00000600935	MTUS1	Q9ULD2	1270 aa		13.19	□□□□□ -0.3
NUP62-222	ENST00000600935	LINC01553	A4QN01	128 aa		13.18	□□□□□ -0.3
NUP62-222	ENST00000600935	PRDM1	O75626	825 aa		13.18	□□□□□ -0.3
NUP62-222	ENST00000600935	TTLL1	O95922	423 aa		13.18	□□□□□ -0.3
NUP62-222	ENST00000600935	MYL3	P08590	195 aa		13.18	□□□□□ -0.3
NUP62-222	ENST00000600935	IFIT2	P09913	472 aa	Known RBP	13.18	□□□□□ -0.3
NUP62-222	ENST00000600935	ALAS1	P13196	640 aa		13.18	□□□□□ -0.3
NUP62-222	ENST00000600935	ALAD	P13716	330 aa		13.18	□□□□□ -0.3
NUP62-222	ENST00000600935	ATP5J	P18859	108 aa		13.18	□□□□□ -0.3
NUP62-222	ENST00000600935	SSTR3	P32745	418 aa	Predicted RBP	13.18	□□□□□ -0.3
NUP62-222	ENST00000600935	STAT2	P52630	851 aa		13.18	□□□□□ -0.3
NUP62-222	ENST00000600935	SNAP25	P60880	206 aa		13.18	□□□□□ -0.3
NUP62-222	ENST00000600935	TKFC	Q3LXA3	575 aa		13.18	□□□□□ -0.3
NUP62-222	ENST00000600935	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.18	□□□□□ -0.3
NUP62-222	ENST00000600935	NFRKB	Q6P4R8	1299 aa		13.18	□□□□□ -0.3
NUP62-222	ENST00000600935	WDR11	Q9BZH6	1224 aa		13.18	□□□□□ -0.3
NUP62-222	ENST00000600935	KCNH6	Q9H252	994 aa		13.18	□□□□□ -0.3
NUP62-222	ENST00000600935	SPTBN4	Q9H254	2564 aa		13.17	□□□□□ -0.3
NUP62-222	ENST00000600935	MINDY4B	A8MYZ0	360 aa		13.17	□□□□□ -0.3
NUP62-222	ENST00000600935	DCX	O43602	365 aa		13.17	□□□□□ -0.3
NUP62-222	ENST00000600935	GJB5	O95377	273 aa		13.17	□□□□□ -0.3
NUP62-222	ENST00000600935	CPT1A	P50416	773 aa		13.17	□□□□□ -0.3
NUP62-222	ENST00000600935	HSP90AB4P	Q58FF6	505 aa		13.17	□□□□□ -0.3
NUP62-222	ENST00000600935	FAM47C	Q5HY64	1035 aa		13.17	□□□□□ -0.3
NUP62-222	ENST00000600935	GIMAP6	Q6P9H5	292 aa		13.17	□□□□□ -0.3
NUP62-222	ENST00000600935	RASGRP2	Q7LDG7	609 aa		13.17	□□□□□ -0.3
NUP62-222	ENST00000600935	NEK9	Q8TD19	979 aa		13.17	□□□□□ -0.3
NUP62-222	ENST00000600935	STAG1	Q8WVM7	1258 aa		13.17	□□□□□ -0.3
NUP62-222	ENST00000600935	KIF1BP	Q96EK5	621 aa		13.17	□□□□□ -0.3
NUP62-222	ENST00000600935	PHOX2B	Q99453	314 aa		13.17	□□□□□ -0.3
NUP62-222	ENST00000600935	WDR87	Q6ZQQ6	2873 aa		13.16	□□□□□ -0.3
NUP62-222	ENST00000600935	TECTA	O75443	2155 aa		13.16	□□□□□ -0.3
NUP62-222	ENST00000600935		A6NJR5	290 aa		13.16	□□□□□ -0.3
NUP62-222	ENST00000600935	PLA2G6	O60733	806 aa		13.16	□□□□□ -0.3
NUP62-222	ENST00000600935	KCNJ6	P48051	423 aa		13.16	□□□□□ -0.3
NUP62-222	ENST00000600935	BFSP2	Q13515	415 aa		13.16	□□□□□ -0.3
NUP62-222	ENST00000600935	HFE2	Q6ZVN8	426 aa		13.16	□□□□□ -0.3
NUP62-222	ENST00000600935	FAM160B2	Q86V87	743 aa		13.16	□□□□□ -0.3
NUP62-222	ENST00000600935	FTSJ3	Q8IY81	847 aa	Known RBP	13.16	□□□□□ -0.3
NUP62-222	ENST00000600935	RETREG2	Q8NC44	543 aa		13.16	□□□□□ -0.3
NUP62-222	ENST00000600935	OR6J1	Q8NGC5	347 aa		13.16	□□□□□ -0.3
NUP62-222	ENST00000600935	DHX38	Q92620	1227 aa	Known RBP	13.16	□□□□□ -0.3
NUP62-222	ENST00000600935	CHMP4C	Q96CF2	233 aa		13.16	□□□□□ -0.3
NUP62-222	ENST00000600935	GMCL1	Q96IK5	515 aa		13.16	□□□□□ -0.3
NUP62-222	ENST00000600935	TGS1	Q96RS0	853 aa	Known RBP	13.16	□□□□□ -0.3
NUP62-222	ENST00000600935	ATG2A	Q2TAZ0	1938 aa		13.15	□□□□□ -0.3
NUP62-222	ENST00000600935	ZDBF2	Q9HCK1	2354 aa		13.15	□□□□□ -0.3
NUP62-222	ENST00000600935	MYO7A	Q13402	2215 aa		13.15	□□□□□ -0.3
NUP62-222	ENST00000600935	NBN	O60934	754 aa		13.15	□□□□□ -0.3
NUP62-222	ENST00000600935	CXCL10	P02778	98 aa		13.15	□□□□□ -0.3
NUP62-222	ENST00000600935	ALDH5A1	P51649	535 aa	Predicted RBP	13.15	□□□□□ -0.3
NUP62-222	ENST00000600935	ZP2	Q05996	745 aa		13.15	□□□□□ -0.3
NUP62-222	ENST00000600935	PTPN11	Q06124	597 aa	Predicted RBP	13.15	□□□□□ -0.3
NUP62-222	ENST00000600935	CSPP1	Q1MSJ5	1256 aa		13.15	□□□□□ -0.3
NUP62-222	ENST00000600935	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.15	□□□□□ -0.3
NUP62-222	ENST00000600935	NSMF	Q6X4W1	530 aa		13.15	□□□□□ -0.3
NUP62-222	ENST00000600935	SIRT2	Q8IXJ6	389 aa		13.15	□□□□□ -0.3
NUP62-222	ENST00000600935	NEDD1	Q8NHV4	660 aa		13.15	□□□□□ -0.3
NUP62-222	ENST00000600935	AFAP1L1	Q8TED9	768 aa		13.15	□□□□□ -0.3
NUP62-222	ENST00000600935	CHURC1	Q8WUH1	139 aa		13.15	□□□□□ -0.3
NUP62-222	ENST00000600935	COPS5	Q92905	334 aa		13.15	□□□□□ -0.3
NUP62-222	ENST00000600935	OSBP2	Q969R2	916 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms