RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 VAT1LQ9HCJ6 419 aa13.54□□□□□ -0.24
SOX2-OT-233ENST00000600778 VTA1Q9NP79 307 aa13.54□□□□□ -0.24
SOX2-OT-233ENST00000600778 PPP4R2Q9NY27 417 aa13.54□□□□□ -0.24
SOX2-OT-233ENST00000600778 GNEQ9Y223 722 aaKnown RBP13.54□□□□□ -0.24
SOX2-OT-233ENST00000600778 LTBP2Q14767 1821 aa13.54□□□□□ -0.24
SOX2-OT-233ENST00000600778 ELP1O95163 1332 aa13.54□□□□□ -0.24
SOX2-OT-233ENST00000600778 WDR19Q8NEZ3 1342 aa13.54□□□□□ -0.24
SOX2-OT-233ENST00000600778 LCTP09848 1927 aa13.53□□□□□ -0.24
SOX2-OT-233ENST00000600778 CTAGE5O15320 804 aa13.53□□□□□ -0.24
SOX2-OT-233ENST00000600778 DHX16O60231 1041 aaKnown RBP13.53□□□□□ -0.24
SOX2-OT-233ENST00000600778 CYP21A2P08686 494 aa13.53□□□□□ -0.24
SOX2-OT-233ENST00000600778 PARP1P09874 1014 aaKnown RBP13.53□□□□□ -0.24
SOX2-OT-233ENST00000600778 RAG1P15918 1043 aa13.53□□□□□ -0.24
SOX2-OT-233ENST00000600778 NKX3-2P78367 333 aa13.53□□□□□ -0.24
SOX2-OT-233ENST00000600778 TRDNQ13061 729 aa13.53□□□□□ -0.24
SOX2-OT-233ENST00000600778 SHHQ15465 462 aa13.53□□□□□ -0.24
SOX2-OT-233ENST00000600778 CDC37Q16543 378 aaPredicted RBP13.53□□□□□ -0.24
SOX2-OT-233ENST00000600778 ANKRD33Q7Z3H0 272 aa13.53□□□□□ -0.24
SOX2-OT-233ENST00000600778 SKAP1Q86WV1 359 aa13.53□□□□□ -0.24
SOX2-OT-233ENST00000600778 TOX2Q96NM4 488 aa13.53□□□□□ -0.24
SOX2-OT-233ENST00000600778 U3KPZ7 1027 aaPredicted RBP13.53□□□□□ -0.24
SOX2-OT-233ENST00000600778 A0A0U1RQG5 324 aaPredicted RBP13.52□□□□□ -0.25
SOX2-OT-233ENST00000600778 ARVCFO00192 962 aa13.52□□□□□ -0.25
SOX2-OT-233ENST00000600778 KIAA0355O15063 1070 aa13.52□□□□□ -0.25
SOX2-OT-233ENST00000600778 SGSM2O43147 1006 aa13.52□□□□□ -0.25
SOX2-OT-233ENST00000600778 CDK7P50613 346 aa13.52□□□□□ -0.25
SOX2-OT-233ENST00000600778 SEC23AQ15436 765 aa13.52□□□□□ -0.25
SOX2-OT-233ENST00000600778 FSCN1Q16658 493 aaKnown RBP13.52□□□□□ -0.25
SOX2-OT-233ENST00000600778 C9orf50Q5SZB4 431 aa13.52□□□□□ -0.25
SOX2-OT-233ENST00000600778 GPR153Q6NV75 609 aa13.52□□□□□ -0.25
SOX2-OT-233ENST00000600778 Q7L0L9 218 aa13.52□□□□□ -0.25
SOX2-OT-233ENST00000600778 STAG2Q8N3U4 1231 aa13.52□□□□□ -0.25
SOX2-OT-233ENST00000600778 DEFB123Q8N688 67 aa13.52□□□□□ -0.25
SOX2-OT-233ENST00000600778 TBC1D5Q92609 795 aa13.52□□□□□ -0.25
SOX2-OT-233ENST00000600778 LRRC37A2A6NM11 1700 aa13.52□□□□□ -0.25
SOX2-OT-233ENST00000600778 ABCB11O95342 1321 aa13.51□□□□□ -0.25
SOX2-OT-233ENST00000600778 MROH7Q68CQ1 1323 aa13.51□□□□□ -0.25
SOX2-OT-233ENST00000600778 LOC102724159A0A0B4J2E5 919 aa13.51□□□□□ -0.25
SOX2-OT-233ENST00000600778 E7EWF7 191 aa13.51□□□□□ -0.25
SOX2-OT-233ENST00000600778 ZEB2O60315 1214 aa13.51□□□□□ -0.25
SOX2-OT-233ENST00000600778 PDE4DQ08499 809 aa13.51□□□□□ -0.25
SOX2-OT-233ENST00000600778 PWP2Q15269 919 aaKnown RBP13.51□□□□□ -0.25
SOX2-OT-233ENST00000600778 QRICH1Q2TAL8 776 aa13.51□□□□□ -0.25
SOX2-OT-233ENST00000600778 CXCL17Q6UXB2 119 aa13.51□□□□□ -0.25
SOX2-OT-233ENST00000600778 FBXO11Q86XK2 927 aa13.51□□□□□ -0.25
SOX2-OT-233ENST00000600778 DNERQ8NFT8 737 aa13.51□□□□□ -0.25
SOX2-OT-233ENST00000600778 MPHOSPH6Q99547 160 aaKnown RBP13.51□□□□□ -0.25
SOX2-OT-233ENST00000600778 WDR11Q9BZH6 1224 aa13.51□□□□□ -0.25
SOX2-OT-233ENST00000600778 JMJD4Q9H9V9 463 aa13.51□□□□□ -0.25
SOX2-OT-233ENST00000600778 Q9Y3F1 56 aa13.51□□□□□ -0.25
SOX2-OT-233ENST00000600778 TAF6LQ9Y6J9 622 aa13.51□□□□□ -0.25
SOX2-OT-233ENST00000600778 COL6A3P12111 3177 aa13.51□□□□□ -0.25
SOX2-OT-233ENST00000600778 KLRF2D3W0D1 207 aa13.5□□□□□ -0.25
SOX2-OT-233ENST00000600778 IFIT3O14879 490 aaKnown RBP13.5□□□□□ -0.25
SOX2-OT-233ENST00000600778 DUSP28Q4G0W2 176 aa13.5□□□□□ -0.25
SOX2-OT-233ENST00000600778 CHST3Q7LGC8 479 aa13.5□□□□□ -0.25
SOX2-OT-233ENST00000600778 RALYLQ86SE5 291 aaKnown RBP13.5□□□□□ -0.25
SOX2-OT-233ENST00000600778 RGS22Q8NE09 1264 aa13.5□□□□□ -0.25
SOX2-OT-233ENST00000600778 MAP4K1Q92918 833 aa13.5□□□□□ -0.25
SOX2-OT-233ENST00000600778 MAD2L2Q9UI95 211 aa13.5□□□□□ -0.25
SOX2-OT-233ENST00000600778 RBM47A0AV96 593 aaKnown RBP13.49□□□□□ -0.25
SOX2-OT-233ENST00000600778 ERICH2A1L162 156 aa13.49□□□□□ -0.25
SOX2-OT-233ENST00000600778 B4DLN1 442 aa13.49□□□□□ -0.25
SOX2-OT-233ENST00000600778 TLR3O15455 904 aaKnown RBP13.49□□□□□ -0.25
SOX2-OT-233ENST00000600778 CABYRO75952 493 aa13.49□□□□□ -0.25
SOX2-OT-233ENST00000600778 TIMP1P01033 207 aa13.49□□□□□ -0.25
SOX2-OT-233ENST00000600778 EDNRBP24530 442 aa13.49□□□□□ -0.25
SOX2-OT-233ENST00000600778 MRPL12P52815 198 aaKnown RBP13.49□□□□□ -0.25
SOX2-OT-233ENST00000600778 EPHB4P54760 987 aa13.49□□□□□ -0.25
SOX2-OT-233ENST00000600778 FPGSQ05932 587 aa13.49□□□□□ -0.25
SOX2-OT-233ENST00000600778 FAM126BQ8IXS8 530 aa13.49□□□□□ -0.25
SOX2-OT-233ENST00000600778 OR6J1Q8NGC5 347 aa13.49□□□□□ -0.25
SOX2-OT-233ENST00000600778 NCOA7Q8NI08 942 aa13.49□□□□□ -0.25
SOX2-OT-233ENST00000600778 TAAR1Q96RJ0 339 aa13.49□□□□□ -0.25
SOX2-OT-233ENST00000600778 SENP2Q9HC62 589 aa13.49□□□□□ -0.25
SOX2-OT-233ENST00000600778 TBX21Q9UL17 535 aa13.49□□□□□ -0.25
SOX2-OT-233ENST00000600778 MRPL11Q9Y3B7 192 aaKnown RBP13.49□□□□□ -0.25
SOX2-OT-233ENST00000600778 GRIN2DO15399 1336 aa13.48□□□□□ -0.25
SOX2-OT-233ENST00000600778 PALM3A6NDB9 673 aaPredicted RBP13.48□□□□□ -0.25
SOX2-OT-233ENST00000600778 PSMC6P62333 389 aa13.48□□□□□ -0.25
SOX2-OT-233ENST00000600778 ITGA7Q13683 1181 aa13.48□□□□□ -0.25
SOX2-OT-233ENST00000600778 WTAPQ15007 396 aa13.48□□□□□ -0.25
SOX2-OT-233ENST00000600778 STOX1Q6ZVD7 989 aa13.48□□□□□ -0.25
SOX2-OT-233ENST00000600778 MCF2L2Q86YR7 1114 aa13.48□□□□□ -0.25
SOX2-OT-233ENST00000600778 SLC43A3Q8NBI5 491 aa13.48□□□□□ -0.25
SOX2-OT-233ENST00000600778 SYTL5Q8TDW5 730 aaPredicted RBP13.48□□□□□ -0.25
SOX2-OT-233ENST00000600778 COL20A1Q9P218 1284 aa13.48□□□□□ -0.25
SOX2-OT-233ENST00000600778 RBM8AQ9Y5S9 174 aaKnown RBP13.48□□□□□ -0.25
SOX2-OT-233ENST00000600778 CFBP00751 764 aa13.47□□□□□ -0.25
SOX2-OT-233ENST00000600778 CD4P01730 458 aa13.47□□□□□ -0.25
SOX2-OT-233ENST00000600778 MYL3P08590 195 aa13.47□□□□□ -0.25
SOX2-OT-233ENST00000600778 CPT1AP50416 773 aa13.47□□□□□ -0.25
SOX2-OT-233ENST00000600778 SART3Q15020 963 aaKnown RBP13.47□□□□□ -0.25
SOX2-OT-233ENST00000600778 PPP2R5BQ15173 497 aa13.47□□□□□ -0.25
SOX2-OT-233ENST00000600778 TMEM67Q5HYA8 995 aa13.47□□□□□ -0.25
SOX2-OT-233ENST00000600778 MFSD5Q6N075 450 aa13.47□□□□□ -0.25
SOX2-OT-233ENST00000600778 HOMER1Q86YM7 354 aa13.47□□□□□ -0.25
SOX2-OT-233ENST00000600778 SCFD2Q8WU76 684 aa13.47□□□□□ -0.25
SOX2-OT-233ENST00000600778 COPS5Q92905 334 aa13.47□□□□□ -0.25
SOX2-OT-233ENST00000600778 RNPC3Q96LT9 517 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms