RNA–Protein interactions for RNA: ENST00000600447.1

PPFIA4-212, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 385 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-212ENST00000600447 PDGFCQ9NRA1 345 aa16.8■□□□□ 0.28
PPFIA4-212ENST00000600447 PCDH10Q9P2E7 1040 aa16.8■□□□□ 0.28
PPFIA4-212ENST00000600447 MAD2L2Q9UI95 211 aa16.8■□□□□ 0.28
PPFIA4-212ENST00000600447 Q9Y3F1 56 aa16.8■□□□□ 0.28
PPFIA4-212ENST00000600447 KLRF2D3W0D1 207 aa16.79■□□□□ 0.28
PPFIA4-212ENST00000600447 DHX16O60231 1041 aaKnown RBP16.79■□□□□ 0.28
PPFIA4-212ENST00000600447 SMPD1P17405 629 aa16.79■□□□□ 0.28
PPFIA4-212ENST00000600447 NOL8Q76FK4 1167 aaKnown RBP16.79■□□□□ 0.28
PPFIA4-212ENST00000600447 ANKRD33Q7Z3H0 272 aa16.79■□□□□ 0.28
PPFIA4-212ENST00000600447 TLK2Q86UE8 772 aa16.79■□□□□ 0.28
PPFIA4-212ENST00000600447 FBXO11Q86XK2 927 aa16.79■□□□□ 0.28
PPFIA4-212ENST00000600447 STAG2Q8N3U4 1231 aa16.79■□□□□ 0.28
PPFIA4-212ENST00000600447 GLT1D1Q96MS3 346 aa16.79■□□□□ 0.28
PPFIA4-212ENST00000600447 TOX2Q96NM4 488 aa16.79■□□□□ 0.28
PPFIA4-212ENST00000600447 MPHOSPH6Q99547 160 aaKnown RBP16.79■□□□□ 0.28
PPFIA4-212ENST00000600447 LSG1Q9H089 658 aaKnown RBP16.79■□□□□ 0.28
PPFIA4-212ENST00000600447 PRDM5Q9NQX1 630 aaPredicted RBP16.79■□□□□ 0.28
PPFIA4-212ENST00000600447 RBM47A0AV96 593 aaKnown RBP16.78■□□□□ 0.28
PPFIA4-212ENST00000600447 TRIM43BA6NCK2 446 aa16.78■□□□□ 0.28
PPFIA4-212ENST00000600447 PALM3A6NDB9 673 aaPredicted RBP16.78■□□□□ 0.28
PPFIA4-212ENST00000600447 B4DLN1 442 aa16.78■□□□□ 0.28
PPFIA4-212ENST00000600447 SOX1O00570 391 aaPredicted RBP16.78■□□□□ 0.28
PPFIA4-212ENST00000600447 CLTBP09497 229 aa16.78■□□□□ 0.28
PPFIA4-212ENST00000600447 EDNRBP24530 442 aa16.78■□□□□ 0.28
PPFIA4-212ENST00000600447 MRPL12P52815 198 aaKnown RBP16.78■□□□□ 0.28
PPFIA4-212ENST00000600447 WTAPQ15007 396 aa16.78■□□□□ 0.28
PPFIA4-212ENST00000600447 LRIT3Q3SXY7 679 aa16.78■□□□□ 0.28
PPFIA4-212ENST00000600447 SH3RF1Q7Z6J0 888 aa16.78■□□□□ 0.28
PPFIA4-212ENST00000600447 MB21D2Q8IYB1 491 aaPredicted RBP16.78■□□□□ 0.28
PPFIA4-212ENST00000600447 TRIM43Q96BQ3 446 aaPredicted RBP16.78■□□□□ 0.28
PPFIA4-212ENST00000600447 MTMR8Q96EF0 704 aa16.78■□□□□ 0.28
PPFIA4-212ENST00000600447 AP5M1Q9H0R1 490 aa16.78■□□□□ 0.28
PPFIA4-212ENST00000600447 VAT1LQ9HCJ6 419 aa16.78■□□□□ 0.28
PPFIA4-212ENST00000600447 MRPL11Q9Y3B7 192 aaKnown RBP16.78■□□□□ 0.28
PPFIA4-212ENST00000600447 KIAA1217Q5T5P2 1943 aa16.78■□□□□ 0.28
PPFIA4-212ENST00000600447 MROH7Q68CQ1 1323 aa16.77■□□□□ 0.28
PPFIA4-212ENST00000600447 DCDC2CA8MYV0 355 aa16.77■□□□□ 0.28
PPFIA4-212ENST00000600447 PQBP1O60828 265 aaKnown RBP16.77■□□□□ 0.28
PPFIA4-212ENST00000600447 ANTXR2P58335 489 aa16.77■□□□□ 0.28
PPFIA4-212ENST00000600447 BEX3Q00994 111 aa16.77■□□□□ 0.28
PPFIA4-212ENST00000600447 PDE4DQ08499 809 aa16.77■□□□□ 0.28
PPFIA4-212ENST00000600447 GRM4Q14833 912 aa16.77■□□□□ 0.28
PPFIA4-212ENST00000600447 FSCN1Q16658 493 aaKnown RBP16.77■□□□□ 0.28
PPFIA4-212ENST00000600447 DUSP28Q4G0W2 176 aa16.77■□□□□ 0.28
PPFIA4-212ENST00000600447 TMEM67Q5HYA8 995 aa16.77■□□□□ 0.28
PPFIA4-212ENST00000600447 CHST3Q7LGC8 479 aa16.77■□□□□ 0.28
PPFIA4-212ENST00000600447 SKAP1Q86WV1 359 aa16.77■□□□□ 0.28
PPFIA4-212ENST00000600447 MCF2L2Q86YR7 1114 aa16.77■□□□□ 0.28
PPFIA4-212ENST00000600447 IGDCC4Q8TDY8 1250 aa16.77■□□□□ 0.28
PPFIA4-212ENST00000600447 MTA3Q9BTC8 594 aa16.77■□□□□ 0.28
PPFIA4-212ENST00000600447 SENP2Q9HC62 589 aa16.77■□□□□ 0.28
PPFIA4-212ENST00000600447 A0A0U1RQG5 324 aaPredicted RBP16.76■□□□□ 0.27
PPFIA4-212ENST00000600447 ZBTB5O15062 677 aa16.76■□□□□ 0.27
PPFIA4-212ENST00000600447 KIAA0355O15063 1070 aa16.76■□□□□ 0.27
PPFIA4-212ENST00000600447 DYNC1LI2O43237 492 aaPredicted RBP16.76■□□□□ 0.27
PPFIA4-212ENST00000600447 CDK7P50613 346 aa16.76■□□□□ 0.27
PPFIA4-212ENST00000600447 FAAP100Q0VG06 881 aa16.76■□□□□ 0.27
PPFIA4-212ENST00000600447 TROAPQ12815 778 aa16.76■□□□□ 0.27
PPFIA4-212ENST00000600447 TBC1D5Q92609 795 aa16.76■□□□□ 0.27
PPFIA4-212ENST00000600447 VTI1AQ96AJ9 217 aa16.76■□□□□ 0.27
PPFIA4-212ENST00000600447 LRCH3Q96II8 777 aa16.76■□□□□ 0.27
PPFIA4-212ENST00000600447 AMNQ9BXJ7 453 aa16.76■□□□□ 0.27
PPFIA4-212ENST00000600447 WDR11Q9BZH6 1224 aa16.76■□□□□ 0.27
PPFIA4-212ENST00000600447 ARVCFO00192 962 aa16.75■□□□□ 0.27
PPFIA4-212ENST00000600447 SLC27A2O14975 620 aa16.75■□□□□ 0.27
PPFIA4-212ENST00000600447 ZEB2O60315 1214 aa16.75■□□□□ 0.27
PPFIA4-212ENST00000600447 CABYRO75952 493 aa16.75■□□□□ 0.27
PPFIA4-212ENST00000600447 PTGS1P23219 599 aa16.75■□□□□ 0.27
PPFIA4-212ENST00000600447 TMEM63BQ5T3F8 832 aa16.75■□□□□ 0.27
PPFIA4-212ENST00000600447 GPR153Q6NV75 609 aa16.75■□□□□ 0.27
PPFIA4-212ENST00000600447 CATIPQ7Z7H3 387 aa16.75■□□□□ 0.27
PPFIA4-212ENST00000600447 SYTL5Q8TDW5 730 aaPredicted RBP16.75■□□□□ 0.27
PPFIA4-212ENST00000600447 BADQ92934 168 aa16.75■□□□□ 0.27
PPFIA4-212ENST00000600447 RIOX1Q9H6W3 641 aa16.75■□□□□ 0.27
PPFIA4-212ENST00000600447 ANO2Q9NQ90 1003 aa16.75■□□□□ 0.27
PPFIA4-212ENST00000600447 TMEM39AQ9NV64 488 aa16.75■□□□□ 0.27
PPFIA4-212ENST00000600447 ITGB8P26012 769 aa16.74■□□□□ 0.27
PPFIA4-212ENST00000600447 MCM5P33992 734 aa16.74■□□□□ 0.27
PPFIA4-212ENST00000600447 GHRHRQ02643 423 aa16.74■□□□□ 0.27
PPFIA4-212ENST00000600447 TRAF1Q13077 416 aa16.74■□□□□ 0.27
PPFIA4-212ENST00000600447 NECTIN1Q15223 517 aa16.74■□□□□ 0.27
PPFIA4-212ENST00000600447 SLC35G1Q2M3R5 365 aa16.74■□□□□ 0.27
PPFIA4-212ENST00000600447 CASC1Q6TDU7 716 aa16.74■□□□□ 0.27
PPFIA4-212ENST00000600447 CXCL17Q6UXB2 119 aa16.74■□□□□ 0.27
PPFIA4-212ENST00000600447 NSUN6Q8TEA1 469 aaKnown RBP16.74■□□□□ 0.27
PPFIA4-212ENST00000600447 SCFD2Q8WU76 684 aa16.74■□□□□ 0.27
PPFIA4-212ENST00000600447 MAP3K14Q99558 947 aa16.74■□□□□ 0.27
PPFIA4-212ENST00000600447 LY9Q9HBG7 655 aa16.74■□□□□ 0.27
PPFIA4-212ENST00000600447 OPLAHO14841 1288 aa16.73■□□□□ 0.27
PPFIA4-212ENST00000600447 NKRFO15226 690 aaKnown RBP eCLIP16.73■□□□□ 0.27
PPFIA4-212ENST00000600447 PRC1O43663 620 aa16.73■□□□□ 0.27
PPFIA4-212ENST00000600447 PPP1R11O60927 126 aaPredicted RBP16.73■□□□□ 0.27
PPFIA4-212ENST00000600447 RAG1P15918 1043 aa16.73■□□□□ 0.27
PPFIA4-212ENST00000600447 HSD17B4P51659 736 aa16.73■□□□□ 0.27
PPFIA4-212ENST00000600447 PPP2R5BQ15173 497 aa16.73■□□□□ 0.27
PPFIA4-212ENST00000600447 CREB3L3Q68CJ9 461 aa16.73■□□□□ 0.27
PPFIA4-212ENST00000600447 SAMD3Q8N6K7 520 aa16.73■□□□□ 0.27
PPFIA4-212ENST00000600447 SLC43A3Q8NBI5 491 aa16.73■□□□□ 0.27
PPFIA4-212ENST00000600447 TAAR1Q96RJ0 339 aa16.73■□□□□ 0.27
PPFIA4-212ENST00000600447 IWS1Q96ST2 819 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms