RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 RBM47A0AV96 593 aaKnown RBP18.47■□□□□ 0.55
VRK3-221ENST00000600284 DYNC1LI2O43237 492 aaPredicted RBP18.47■□□□□ 0.55
VRK3-221ENST00000600284 PARP1P09874 1014 aaKnown RBP18.47■□□□□ 0.55
VRK3-221ENST00000600284 ITGB8P26012 769 aa18.47■□□□□ 0.55
VRK3-221ENST00000600284 CALML3P27482 149 aa18.47■□□□□ 0.55
VRK3-221ENST00000600284 SHHQ15465 462 aa18.47■□□□□ 0.55
VRK3-221ENST00000600284 FSCN1Q16658 493 aaKnown RBP18.47■□□□□ 0.55
VRK3-221ENST00000600284 DUSP28Q4G0W2 176 aa18.47■□□□□ 0.55
VRK3-221ENST00000600284 IFIT1BQ5T764 474 aaKnown RBP18.47■□□□□ 0.55
VRK3-221ENST00000600284 FAM109BQ6ICB4 259 aaPredicted RBP18.47■□□□□ 0.55
VRK3-221ENST00000600284 SLC30A10Q6XR72 485 aa18.47■□□□□ 0.55
VRK3-221ENST00000600284 KIAA1211Q6ZU35 1233 aa18.47■□□□□ 0.55
VRK3-221ENST00000600284 EEPD1Q7L9B9 569 aa18.47■□□□□ 0.55
VRK3-221ENST00000600284 ADGRF4Q8IZF3 695 aa18.47■□□□□ 0.55
VRK3-221ENST00000600284 DEFB123Q8N688 67 aa18.47■□□□□ 0.55
VRK3-221ENST00000600284 ABCB11O95342 1321 aa18.47■□□□□ 0.55
VRK3-221ENST00000600284 EDNRBP24530 442 aa18.46■□□□□ 0.55
VRK3-221ENST00000600284 BEX3Q00994 111 aa18.46■□□□□ 0.55
VRK3-221ENST00000600284 SEC23AQ15436 765 aa18.46■□□□□ 0.55
VRK3-221ENST00000600284 CDC37Q16543 378 aaPredicted RBP18.46■□□□□ 0.55
VRK3-221ENST00000600284 SLC43A3Q8NBI5 491 aa18.46■□□□□ 0.55
VRK3-221ENST00000600284 TBX21Q9UL17 535 aa18.46■□□□□ 0.55
VRK3-221ENST00000600284 DDX49Q9Y6V7 483 aaKnown RBP18.46■□□□□ 0.55
VRK3-221ENST00000600284 TLR3O15455 904 aaKnown RBP18.45■□□□□ 0.54
VRK3-221ENST00000600284 SGSM2O43147 1006 aa18.45■□□□□ 0.54
VRK3-221ENST00000600284 TIMP1P01033 207 aa18.45■□□□□ 0.54
VRK3-221ENST00000600284 CYP21A2P08686 494 aa18.45■□□□□ 0.54
VRK3-221ENST00000600284 PTH1RQ03431 593 aa18.45■□□□□ 0.54
VRK3-221ENST00000600284 PDE4DQ08499 809 aa18.45■□□□□ 0.54
VRK3-221ENST00000600284 USH1GQ495M9 461 aa18.45■□□□□ 0.54
VRK3-221ENST00000600284 MCF2L2Q86YR7 1114 aa18.45■□□□□ 0.54
VRK3-221ENST00000600284 WDR11Q9BZH6 1224 aa18.45■□□□□ 0.54
VRK3-221ENST00000600284 CPVLQ9H3G5 476 aa18.45■□□□□ 0.54
VRK3-221ENST00000600284 NKRFO15226 690 aaKnown RBP eCLIP18.44■□□□□ 0.54
VRK3-221ENST00000600284 FPGSQ05932 587 aa18.44■□□□□ 0.54
VRK3-221ENST00000600284 C9orf50Q5SZB4 431 aa18.44■□□□□ 0.54
VRK3-221ENST00000600284 CXCL17Q6UXB2 119 aa18.44■□□□□ 0.54
VRK3-221ENST00000600284 CYB5R4Q7L1T6 521 aa18.44■□□□□ 0.54
VRK3-221ENST00000600284 FAM126BQ8IXS8 530 aa18.44■□□□□ 0.54
VRK3-221ENST00000600284 JMJD4Q9H9V9 463 aa18.44■□□□□ 0.54
VRK3-221ENST00000600284 MRPL11Q9Y3B7 192 aaKnown RBP18.44■□□□□ 0.54
VRK3-221ENST00000600284 LCTP09848 1927 aa18.44■□□□□ 0.54
VRK3-221ENST00000600284 LRRC37A2A6NM11 1700 aa18.43■□□□□ 0.54
VRK3-221ENST00000600284 ERICH2A1L162 156 aa18.43■□□□□ 0.54
VRK3-221ENST00000600284 CD4P01730 458 aa18.43■□□□□ 0.54
VRK3-221ENST00000600284 QRICH1Q2TAL8 776 aa18.43■□□□□ 0.54
VRK3-221ENST00000600284 MFSD5Q6N075 450 aa18.43■□□□□ 0.54
VRK3-221ENST00000600284 FBXO11Q86XK2 927 aa18.43■□□□□ 0.54
VRK3-221ENST00000600284 NCOA7Q8NI08 942 aa18.43■□□□□ 0.54
VRK3-221ENST00000600284 MAP4K1Q92918 833 aa18.43■□□□□ 0.54
VRK3-221ENST00000600284 MTMR10Q9NXD2 777 aa18.43■□□□□ 0.54
VRK3-221ENST00000600284 KLRF2D3W0D1 207 aa18.42■□□□□ 0.54
VRK3-221ENST00000600284 DHX16O60231 1041 aaKnown RBP18.42■□□□□ 0.54
VRK3-221ENST00000600284 CPT1AP50416 773 aa18.42■□□□□ 0.54
VRK3-221ENST00000600284 SMAD3P84022 425 aaKnown RBP18.42■□□□□ 0.54
VRK3-221ENST00000600284 ITGA7Q13683 1181 aa18.42■□□□□ 0.54
VRK3-221ENST00000600284 SART3Q15020 963 aaKnown RBP18.42■□□□□ 0.54
VRK3-221ENST00000600284 TMEM63BQ5T3F8 832 aa18.42■□□□□ 0.54
VRK3-221ENST00000600284 Q7L0L9 218 aa18.42■□□□□ 0.54
VRK3-221ENST00000600284 RALYLQ86SE5 291 aaKnown RBP18.42■□□□□ 0.54
VRK3-221ENST00000600284 SCFD2Q8WU76 684 aa18.42■□□□□ 0.54
VRK3-221ENST00000600284 POLR3EQ9NVU0 708 aa18.42■□□□□ 0.54
VRK3-221ENST00000600284 MAD2L2Q9UI95 211 aa18.42■□□□□ 0.54
VRK3-221ENST00000600284 PALM3A6NDB9 673 aaPredicted RBP18.41■□□□□ 0.54
VRK3-221ENST00000600284 E7EWF7 191 aa18.41■□□□□ 0.54
VRK3-221ENST00000600284 IFIT3O14879 490 aaKnown RBP18.41■□□□□ 0.54
VRK3-221ENST00000600284 TRAF1Q13077 416 aa18.41■□□□□ 0.54
VRK3-221ENST00000600284 PPP2R5BQ15173 497 aa18.41■□□□□ 0.54
VRK3-221ENST00000600284 BRDTQ58F21 947 aaPredicted RBP18.41■□□□□ 0.54
VRK3-221ENST00000600284 STAG2Q8N3U4 1231 aa18.41■□□□□ 0.54
VRK3-221ENST00000600284 SAMD3Q8N6K7 520 aa18.41■□□□□ 0.54
VRK3-221ENST00000600284 NSUN6Q8TEA1 469 aaKnown RBP18.41■□□□□ 0.54
VRK3-221ENST00000600284 MTMR8Q96EF0 704 aa18.41■□□□□ 0.54
VRK3-221ENST00000600284 IWS1Q96ST2 819 aa18.41■□□□□ 0.54
VRK3-221ENST00000600284 AMNQ9BXJ7 453 aa18.41■□□□□ 0.54
VRK3-221ENST00000600284 VAT1LQ9HCJ6 419 aa18.41■□□□□ 0.54
VRK3-221ENST00000600284 MAP3K20Q9NYL2 800 aaKnown RBP18.41■□□□□ 0.54
VRK3-221ENST00000600284 EPHB4P54760 987 aa18.4■□□□□ 0.54
VRK3-221ENST00000600284 PPIGQ13427 754 aaKnown RBP eCLIP18.4■□□□□ 0.543e-6■■■■□ 22
VRK3-221ENST00000600284 TMEM199Q8N511 208 aa18.4■□□□□ 0.54
VRK3-221ENST00000600284 SYTL5Q8TDW5 730 aaPredicted RBP18.4■□□□□ 0.54
VRK3-221ENST00000600284 TBC1D5Q92609 795 aa18.4■□□□□ 0.54
VRK3-221ENST00000600284 STXBP5LQ9Y2K9 1186 aa18.4■□□□□ 0.54
VRK3-221ENST00000600284 GRIN2DO15399 1336 aa18.4■□□□□ 0.54
VRK3-221ENST00000600284 ZBTB5O15062 677 aa18.39■□□□□ 0.53
VRK3-221ENST00000600284 KPNA6O60684 536 aa18.39■□□□□ 0.53
VRK3-221ENST00000600284 PTGS1P23219 599 aa18.39■□□□□ 0.53
VRK3-221ENST00000600284 PURAQ00577 322 aaKnown RBP18.39■□□□□ 0.53
VRK3-221ENST00000600284 GHRHRQ02643 423 aa18.39■□□□□ 0.53
VRK3-221ENST00000600284 TTLL4Q14679 1199 aa18.39■□□□□ 0.53
VRK3-221ENST00000600284 GRM4Q14833 912 aa18.39■□□□□ 0.53
VRK3-221ENST00000600284 WTAPQ15007 396 aa18.39■□□□□ 0.53
VRK3-221ENST00000600284 OR6J1Q8NGC5 347 aa18.39■□□□□ 0.53
VRK3-221ENST00000600284 RNPC3Q96LT9 517 aaKnown RBP18.39■□□□□ 0.53
VRK3-221ENST00000600284 TAAR1Q96RJ0 339 aa18.39■□□□□ 0.53
VRK3-221ENST00000600284 MTA3Q9BTC8 594 aa18.39■□□□□ 0.53
VRK3-221ENST00000600284 A6NJR5 290 aa18.38■□□□□ 0.53
VRK3-221ENST00000600284 TXNP10599 105 aaKnown RBP18.38■□□□□ 0.53
VRK3-221ENST00000600284 STXBP2Q15833 593 aa18.38■□□□□ 0.53
VRK3-221ENST00000600284 ZNF697Q5TEC3 545 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms