RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 RTN1Q16799 776 aa17.63■□□□□ 0.41
LIG1-219ENST00000600055 FBXL16Q8N461 479 aa17.63■□□□□ 0.41
LIG1-219ENST00000600055 RGS22Q8NE09 1264 aa17.63■□□□□ 0.41
LIG1-219ENST00000600055 DIS3LQ8TF46 1054 aaKnown RBP17.63■□□□□ 0.41
LIG1-219ENST00000600055 RRP36Q96EU6 259 aaKnown RBP17.63■□□□□ 0.41
LIG1-219ENST00000600055 LARP6Q9BRS8 491 aaKnown RBP17.63■□□□□ 0.41
LIG1-219ENST00000600055 COL20A1Q9P218 1284 aa17.63■□□□□ 0.41
LIG1-219ENST00000600055 NRBP1Q9UHY1 535 aa17.63■□□□□ 0.41
LIG1-219ENST00000600055 ASB14A6NK59 587 aa17.62■□□□□ 0.41
LIG1-219ENST00000600055 FARP2O94887 1054 aaPredicted RBP17.62■□□□□ 0.41
LIG1-219ENST00000600055 MNX1P50219 401 aaPredicted RBP17.62■□□□□ 0.41
LIG1-219ENST00000600055 ALDH5A1P51649 535 aaPredicted RBP17.62■□□□□ 0.41
LIG1-219ENST00000600055 ACVR2BQ13705 512 aa17.62■□□□□ 0.41
LIG1-219ENST00000600055 UBE2Q1Q7Z7E8 422 aa17.62■□□□□ 0.41
LIG1-219ENST00000600055 SYTL5Q8TDW5 730 aaPredicted RBP17.62■□□□□ 0.41
LIG1-219ENST00000600055 LENG1Q96BZ8 264 aaPredicted RBP17.62■□□□□ 0.41
LIG1-219ENST00000600055 KATNBL1Q9H079 304 aa17.62■□□□□ 0.41
LIG1-219ENST00000600055 RBM28Q9NW13 759 aaKnown RBP17.62■□□□□ 0.41
LIG1-219ENST00000600055 CFBP00751 764 aa17.61■□□□□ 0.41
LIG1-219ENST00000600055 ADD1P35611 737 aaKnown RBP17.61■□□□□ 0.41
LIG1-219ENST00000600055 METAP2P50579 478 aaKnown RBP eCLIP17.61■□□□□ 0.41
LIG1-219ENST00000600055 FUT2Q10981 343 aa17.61■□□□□ 0.41
LIG1-219ENST00000600055 EEPD1Q7L9B9 569 aa17.61■□□□□ 0.41
LIG1-219ENST00000600055 MCF2L2Q86YR7 1114 aa17.61■□□□□ 0.41
LIG1-219ENST00000600055 TAAR1Q96RJ0 339 aa17.61■□□□□ 0.41
LIG1-219ENST00000600055 PDRG1Q9NUG6 133 aa17.61■□□□□ 0.41
LIG1-219ENST00000600055 SEC63Q9UGP8 760 aaKnown RBP17.61■□□□□ 0.41
LIG1-219ENST00000600055 CNTNAP5Q8WYK1 1306 aa17.61■□□□□ 0.41
LIG1-219ENST00000600055 LCTP09848 1927 aa17.6■□□□□ 0.41
LIG1-219ENST00000600055 BAZ2BQ9UIF8 2168 aaKnown RBP17.6■□□□□ 0.41
LIG1-219ENST00000600055 MSCO60682 206 aa17.6■□□□□ 0.41
LIG1-219ENST00000600055 EIF5BO60841 1220 aaKnown RBP17.6■□□□□ 0.41
LIG1-219ENST00000600055 RCAN1P53805 252 aa17.6■□□□□ 0.41
LIG1-219ENST00000600055 ANAPC15P60006 121 aa17.6■□□□□ 0.41
LIG1-219ENST00000600055 MORC4Q8TE76 937 aa17.6■□□□□ 0.41
LIG1-219ENST00000600055 PAWRQ96IZ0 340 aaKnown RBP17.6■□□□□ 0.41
LIG1-219ENST00000600055 ABHD16BQ9H3Z7 469 aa17.6■□□□□ 0.41
LIG1-219ENST00000600055 ADD3Q9UEY8 706 aaKnown RBP17.6■□□□□ 0.41
LIG1-219ENST00000600055 ADCY6O43306 1168 aa17.59■□□□□ 0.41
LIG1-219ENST00000600055 AKR1A1P14550 325 aa17.59■□□□□ 0.41
LIG1-219ENST00000600055 PDIA3P30101 505 aaKnown RBP17.59■□□□□ 0.41
LIG1-219ENST00000600055 HOXA13P31271 388 aaPredicted RBP17.59■□□□□ 0.41
LIG1-219ENST00000600055 HSD17B4P51659 736 aa17.59■□□□□ 0.41
LIG1-219ENST00000600055 CCDC144BQ3MJ40 725 aa17.59■□□□□ 0.41
LIG1-219ENST00000600055 FBXO16Q8IX29 292 aaPredicted RBP17.59■□□□□ 0.41
LIG1-219ENST00000600055 PDGFCQ9NRA1 345 aa17.59■□□□□ 0.41
LIG1-219ENST00000600055 FAM184BQ9ULE4 1060 aa17.59■□□□□ 0.41
LIG1-219ENST00000600055 MKI67P46013 3256 aaKnown RBP17.58■□□□□ 0.41
LIG1-219ENST00000600055 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.58■□□□□ 0.4
LIG1-219ENST00000600055 EVCP57679 992 aa17.58■□□□□ 0.4
LIG1-219ENST00000600055 CCT2P78371 535 aaKnown RBP17.58■□□□□ 0.4
LIG1-219ENST00000600055 TRAF1Q13077 416 aa17.58■□□□□ 0.4
LIG1-219ENST00000600055 GJC2Q5T442 439 aaPredicted RBP17.58■□□□□ 0.4
LIG1-219ENST00000600055 ANKLE1Q8NAG6 615 aa17.58■□□□□ 0.4
LIG1-219ENST00000600055 DNERQ8NFT8 737 aa17.58■□□□□ 0.4
LIG1-219ENST00000600055 GPKOWQ92917 476 aaPredicted RBP eCLIP17.58■□□□□ 0.4
LIG1-219ENST00000600055 IL17RAQ96F46 866 aa17.58■□□□□ 0.4
LIG1-219ENST00000600055 MAF1Q9H063 256 aa17.58■□□□□ 0.4
LIG1-219ENST00000600055 NCOA5Q9HCD5 579 aaKnown RBP17.58■□□□□ 0.4
LIG1-219ENST00000600055 V9GY48 417 aaPredicted RBP17.58■□□□□ 0.4
LIG1-219ENST00000600055 NID2Q14112 1375 aa17.57■□□□□ 0.4
LIG1-219ENST00000600055 PGK1P00558 417 aa17.57■□□□□ 0.4
LIG1-219ENST00000600055 MYCNP04198 464 aaPredicted RBP17.57■□□□□ 0.4
LIG1-219ENST00000600055 RARBP10826 455 aa17.57■□□□□ 0.4
LIG1-219ENST00000600055 CAPN2P17655 700 aa17.57■□□□□ 0.4
LIG1-219ENST00000600055 PTGS1P23219 599 aa17.57■□□□□ 0.4
LIG1-219ENST00000600055 EDNRBP24530 442 aa17.57■□□□□ 0.4
LIG1-219ENST00000600055 ADCYAP1R1P41586 468 aa17.57■□□□□ 0.4
LIG1-219ENST00000600055 GHRHRQ02643 423 aa17.57■□□□□ 0.4
LIG1-219ENST00000600055 TMEM63BQ5T3F8 832 aa17.57■□□□□ 0.4
LIG1-219ENST00000600055 TAPT1Q6NXT6 567 aa17.57■□□□□ 0.4
LIG1-219ENST00000600055 RMDN3Q96TC7 470 aa17.57■□□□□ 0.4
LIG1-219ENST00000600055 MYH6P13533 1939 aa17.57■□□□□ 0.4
LIG1-219ENST00000600055 GCOM1H8Y6P7 765 aaPredicted RBP17.56■□□□□ 0.4
LIG1-219ENST00000600055 PPFIA3O75145 1194 aa17.56■□□□□ 0.4
LIG1-219ENST00000600055 POLR2MP0CAP2 368 aa17.56■□□□□ 0.4
LIG1-219ENST00000600055 EIF2AK2P19525 551 aaKnown RBP17.56■□□□□ 0.4
LIG1-219ENST00000600055 IRX5P78411 483 aaPredicted RBP17.56■□□□□ 0.4
LIG1-219ENST00000600055 PDE4DQ08499 809 aa17.56■□□□□ 0.4
LIG1-219ENST00000600055 STK3Q13188 491 aa17.56■□□□□ 0.4
LIG1-219ENST00000600055 WWC2Q6AWC2 1192 aa17.56■□□□□ 0.4
LIG1-219ENST00000600055 HEATR3Q7Z4Q2 680 aa17.56■□□□□ 0.4
LIG1-219ENST00000600055 NECAB2Q7Z6G3 386 aa17.56■□□□□ 0.4
LIG1-219ENST00000600055 FCHSD1Q86WN1 690 aa17.56■□□□□ 0.4
LIG1-219ENST00000600055 NSUN6Q8TEA1 469 aaKnown RBP17.56■□□□□ 0.4
LIG1-219ENST00000600055 VTA1Q9NP79 307 aa17.56■□□□□ 0.4
LIG1-219ENST00000600055 XPNPEP3Q9NQH7 507 aa17.56■□□□□ 0.4
LIG1-219ENST00000600055 MCM3APO60318 1980 aa17.56■□□□□ 0.4
LIG1-219ENST00000600055 LOC102724159A0A0B4J2E5 919 aa17.55■□□□□ 0.4
LIG1-219ENST00000600055 CCDC196A0A1B0GTZ2 297 aa17.55■□□□□ 0.4
LIG1-219ENST00000600055 PPP2R5BQ15173 497 aa17.55■□□□□ 0.4
LIG1-219ENST00000600055 PWP2Q15269 919 aaKnown RBP17.55■□□□□ 0.4
LIG1-219ENST00000600055 LRRC41Q15345 812 aa17.55■□□□□ 0.4
LIG1-219ENST00000600055 NTRK3Q16288 839 aa17.55■□□□□ 0.4
LIG1-219ENST00000600055 ARHGEF16Q5VV41 709 aa17.55■□□□□ 0.4
LIG1-219ENST00000600055 USP17L6PQ6QN14 398 aa17.55■□□□□ 0.4
LIG1-219ENST00000600055 PHKBQ93100 1093 aa17.55■□□□□ 0.4
LIG1-219ENST00000600055 C11orf49Q9H6J7 331 aa17.55■□□□□ 0.4
LIG1-219ENST00000600055 PXMP2Q9NR77 195 aa17.55■□□□□ 0.4
LIG1-219ENST00000600055 MAP3K20Q9NYL2 800 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms